Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0565
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122267-1|AAM52779.1|  205|Drosophila melanogaster SD20015p pro...    45   8e-05
AE014134-1872|AAS64676.1|  205|Drosophila melanogaster CG33677-P...    45   8e-05
AY754313-1|AAW31647.1|   85|Drosophila melanogaster CG12700 prot...    29   7.6  

>AY122267-1|AAM52779.1|  205|Drosophila melanogaster SD20015p
           protein.
          Length = 205

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
 Frame = +1

Query: 292 KTFLDGLRFSPECTSELSVLLCTEK--LYENIPKHLRMKPGVVSLQWKIDVSLSQSTIET 465
           K  +D L  + E   ++  +L   +  L +N       +  +  LQW+I++SLS +T++ 
Sbjct: 96  KCLMDDLNLTEEYVEDICKVLLNHRDVLSKNFSDTKMDRVKMSKLQWRINISLSLNTVQI 155

Query: 466 ENPSPQRRKEIMHTLTHVIVTFVLTDGQIRTYRLSISQFHELRYVIASALKNMIILERRK 645
           + P+             +++ F L + + RT  L +S F ++RY IA  L  +  L+ R 
Sbjct: 156 DKPT-------------IVLHFKLQNKEYRTLELPLSMFQQVRYNIALLLNELQSLQSRL 202

Query: 646 CMK 654
            +K
Sbjct: 203 ALK 205


>AE014134-1872|AAS64676.1|  205|Drosophila melanogaster CG33677-PB,
           isoform B protein.
          Length = 205

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
 Frame = +1

Query: 292 KTFLDGLRFSPECTSELSVLLCTEK--LYENIPKHLRMKPGVVSLQWKIDVSLSQSTIET 465
           K  +D L  + E   ++  +L   +  L +N       +  +  LQW+I++SLS +T++ 
Sbjct: 96  KCLMDDLNLTEEYVEDICKVLLNHRDVLSKNFSDTKMDRVKMSKLQWRINISLSLNTVQI 155

Query: 466 ENPSPQRRKEIMHTLTHVIVTFVLTDGQIRTYRLSISQFHELRYVIASALKNMIILERRK 645
           + P+             +++ F L + + RT  L +S F ++RY IA  L  +  L+ R 
Sbjct: 156 DKPT-------------IVLHFKLQNKEYRTLELPLSMFQQVRYNIALLLNELQSLQSRL 202

Query: 646 CMK 654
            +K
Sbjct: 203 ALK 205


>AY754313-1|AAW31647.1|   85|Drosophila melanogaster CG12700
           protein.
          Length = 85

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 18/74 (24%), Positives = 32/74 (43%)
 Frame = -1

Query: 365 FSVHSNTDSSDVHSGEKRSPSKNVFTSSWPHKLLVADRSLAKCLTIALTAANFSAFIRLD 186
           ++ H   D      GE+ +P      SSW    +  D+ +   +T+   AAN+     L+
Sbjct: 7   WAYHHKDDDDQAAEGEELTPQSPHDISSWDANFINVDQPILFEITV---AANYLEIKGLE 63

Query: 185 NLSSSIPSNSLRDK 144
           +L     +N +R K
Sbjct: 64  DLCCKTLANMIRGK 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,835,994
Number of Sequences: 53049
Number of extensions: 561421
Number of successful extensions: 1864
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)