Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0563
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   5.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.3  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   5.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.2  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 6   GHQTLPKFLIKNYNVYWGYL 65
           G +T+ ++LIKN   +W  L
Sbjct: 83  GSRTIIRYLIKNKRDWWNEL 102


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 123 GCQILKLQ*SSVLNNANFVINNPNTHYN 40
           GC   KL          F ++N NT+YN
Sbjct: 256 GCSPKKLIVGIPFYGRTFTLSNSNTNYN 283


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 6   GHQTLPKFLIKNYNVYWGYL 65
           G +T+ ++LIKN   +W  L
Sbjct: 83  GSRTIIRYLIKNKRDWWNEL 102


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 298 KKQISFVKTKLTQK 339
           K+ ISF K KLT K
Sbjct: 124 KESISFAKVKLTNK 137


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 368 VLTLLRVQTYFCVNFVFTNEICF 300
           +L LL +  +FC   +FT  + F
Sbjct: 160 LLFLLCIYHFFCAFIIFTMHLLF 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,374
Number of Sequences: 336
Number of extensions: 3165
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)