Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0561
(645 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 47 2e-07
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 47 2e-07
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 24 1.4
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 1.9
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 23 2.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 5.8
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 21 7.7
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 46.8 bits (106), Expect = 2e-07
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +2
Query: 272 CPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCVCEGGFLRSKNGTCVSIDE 451
CP NE F+ C G C Q C + C ++C PGCVC G+LR+K CV +
Sbjct: 37 CPSNEIFSRC-DGRC-QRFCPNVVPKPLC----IKICAPGCVCRLGYLRNKKKVCVPRSK 90
Query: 452 C 454
C
Sbjct: 91 C 91
Score = 41.1 bits (92), Expect = 9e-06
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 80 CPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKC 259
CP NE + G C+ + C C + C GC C++GYLR++ C+P+ KC
Sbjct: 37 CPSNEIFSRCDGRCQ-RFCPNVVPKPLCIKI----CAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 33.9 bits (74), Expect = 0.001
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 458 RELCPVNEVYSSCRQPNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDER 637
R CP NE++S C C C C + C GCVC+ G+ R CV
Sbjct: 34 RGKCPSNEIFSRC-DGRCQRF-CPNVVPKPLCI--KICAPGCVCRLGYLRNKKKVCVPRS 89
Query: 638 DC 643
C
Sbjct: 90 KC 91
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 46.8 bits (106), Expect = 2e-07
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +2
Query: 272 CPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCVCEGGFLRSKNGTCVSIDE 451
CP NE F+ C G C Q C + C ++C PGCVC G+LR+K CV +
Sbjct: 37 CPSNEIFSRC-DGRC-QRFCPNVVPKPLC----IKICAPGCVCRLGYLRNKKKVCVPRSK 90
Query: 452 C 454
C
Sbjct: 91 C 91
Score = 41.1 bits (92), Expect = 9e-06
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 80 CPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKC 259
CP NE + G C+ + C C + C GC C++GYLR++ C+P+ KC
Sbjct: 37 CPSNEIFSRCDGRCQ-RFCPNVVPKPLCIKI----CAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 33.9 bits (74), Expect = 0.001
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 458 RELCPVNEVYSSCRQPNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDER 637
R CP NE++S C C C C + C GCVC+ G+ R CV
Sbjct: 34 RGKCPSNEIFSRC-DGRCQRF-CPNVVPKPLCI--KICAPGCVCRLGYLRNKKKVCVPRS 89
Query: 638 DC 643
C
Sbjct: 90 KC 91
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = +2
Query: 419 SKNGTCVSIDECHRELCPVNEVYSSCRQPNCNSDKCEYKYRSQSC 553
S NG V + S C+ D CEY YR C
Sbjct: 90 SLNGMLTFFQRIPAYRAEVQKAISECKGI-AKGDNCEYAYRFNKC 133
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Frame = -2
Query: 614 CQPYEILFYKHNRLRR------VRPRDTTVTCICTRIYQNYN 507
C+P + RLRR RP + IC R+Y + N
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLN 46
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = +2
Query: 131 KCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVP 271
K ++ + Q D G I Y+ DENG + PT P
Sbjct: 61 KQVDNETPVVSQGSDSYTAPDGQQVSITYVADENGFQVQGSHIPTAP 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 4.4
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -2
Query: 602 EILFYKHNRLRRVRPRDTTVTCICTRI--YQNYNWAVDSSSTLRSR 471
E+LF +N + VRP T TR+ Y N ++ +S L ++
Sbjct: 620 ELLFINNNYINLVRPNTFTDKVNLTRVDMYANMIETMELTSLLLTK 665
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 78 VAVQRTMMLTNANTTIQLTTSS 13
V ++++++TN TTI T+S
Sbjct: 824 VTTEQSVVVTNVTTTINTPTTS 845
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.4 bits (43), Expect = 7.7
Identities = 7/25 (28%), Positives = 11/25 (44%)
Frame = +2
Query: 479 EVYSSCRQPNCNSDKCEYKYRSQSC 553
E+ + CR D C+ Y+ C
Sbjct: 107 EIVAVCRNEEYTGDDCQKTYQYVQC 131
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,522
Number of Sequences: 438
Number of extensions: 4316
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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