Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0560
(707 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 126 2e-29
SB_36462| Best HMM Match : efhand (HMM E-Value=5.8e-09) 104 6e-23
SB_53415| Best HMM Match : efhand (HMM E-Value=2.7e-12) 70 2e-12
SB_51782| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21) 50 2e-06
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 48 6e-06
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 46 3e-05
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 46 3e-05
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 46 3e-05
SB_27027| Best HMM Match : efhand (HMM E-Value=8.7e-08) 44 2e-04
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31) 42 4e-04
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_18942| Best HMM Match : efhand (HMM E-Value=1.7e-30) 42 5e-04
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 42 6e-04
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 42 6e-04
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 40 0.003
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24) 38 0.011
SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 37 0.018
SB_8171| Best HMM Match : efhand (HMM E-Value=6.6e-12) 36 0.024
SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.043
SB_42269| Best HMM Match : efhand (HMM E-Value=4.8e-05) 35 0.056
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 35 0.056
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 35 0.074
SB_4349| Best HMM Match : efhand (HMM E-Value=0.00066) 35 0.074
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 34 0.098
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 34 0.13
SB_37032| Best HMM Match : efhand (HMM E-Value=4.7e-35) 33 0.17
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23) 32 0.40
SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08) 32 0.52
SB_30167| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_56183| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_27850| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_49674| Best HMM Match : efhand (HMM E-Value=2e-13) 30 1.6
SB_53403| Best HMM Match : efhand (HMM E-Value=2.8e-12) 30 2.1
SB_45405| Best HMM Match : Calpain_III (HMM E-Value=6.1e-07) 30 2.1
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 30 2.1
SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37) 29 2.8
SB_27337| Best HMM Match : efhand (HMM E-Value=2.9e-21) 29 2.8
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 29 3.7
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 29 4.9
SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_31141| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_59144| Best HMM Match : efhand (HMM E-Value=0.093) 28 6.5
SB_57618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_49134| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_38969| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_37793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_22989| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 28 8.5
SB_20632| Best HMM Match : Cu_bind_like (HMM E-Value=0.51) 28 8.5
>SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 622
Score = 126 bits (303), Expect = 2e-29
Identities = 65/144 (45%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Frame = +2
Query: 245 GYPGQAAYGGMPPGQLEIGHGPYPSIGVGGT--ITPQVQQWFRAVDKDQSGFITSTELRS 418
GYP Q PPG G+G PS G P + WF AVD+D+SG I+S EL
Sbjct: 427 GYPPQQP--SYPPG----GYGGPPSAPYGAPPGADPTLWNWFIAVDRDRSGAISSDELEQ 480
Query: 419 ALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTYVNQWLAVFKTYDTDQSGFI 598
AL+N F++ C LMIG+FD D++G IN EF +L++Y+ QW F YDTD+SG I
Sbjct: 481 ALMNNNWSRFNQETCRLMIGLFDHDQSGTINFQEFQQLWSYIQQWKGSFDRYDTDRSGNI 540
Query: 599 DEGELSKALTQMGFRFSPEFINIL 670
EL A +MGFR SP+FI+++
Sbjct: 541 SGQELHTAFAEMGFRVSPQFISLV 564
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +2
Query: 350 VQQW---FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDE 520
+QQW F D D+SG I+ EL +A G S +L++ FD+ + D+
Sbjct: 522 IQQWKGSFDRYDTDRSGNISGQELHTAFAE-MGFRVSPQFISLVLIKFDRAARSSLKFDD 580
Query: 521 FDKLYTYVNQWLAVFKTYDTDQSGFI 598
F + + F+ DT+ +G I
Sbjct: 581 FIQCCVMIRMLTDAFRARDTNMNGVI 606
>SB_36462| Best HMM Match : efhand (HMM E-Value=5.8e-09)
Length = 402
Score = 104 bits (250), Expect = 6e-23
Identities = 70/183 (38%), Positives = 102/183 (55%), Gaps = 29/183 (15%)
Frame = +2
Query: 233 AYNSGYPGQAAYGGMPPGQ--LEIG-HGP----YP---SIGVGGT---ITPQVQQWFRAV 373
+YN GY G YG P G + G +GP YP S GG + P + QWF+AV
Sbjct: 51 SYNPGYGGHQGYGQQPHGYGGQQYGQYGPPPSAYPGQFSAPTGGPPPGVDPSLWQWFQAV 110
Query: 374 DKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQIN--LDEFDKL-YTY- 541
D+D++G IT++ELR+ALVN+ F+E C +MIGMFDKD IN L + YTY
Sbjct: 111 DQDRTGKITASELRAALVNSNWSQFNEETCRMMIGMFDKD-GSAINPFLGKIITFEYTYG 169
Query: 542 ------------VNQWLAVFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFINILTKRSN 685
+N ++ + ++D D+SG ID GEL+ A + G+R SP+F N+ ++ +
Sbjct: 170 THTRPHQLNLAIINSFICI-SSFDRDRSGTIDAGELNTAFSTFGYRLSPQFCNLCVQKFD 228
Query: 686 TND 694
+D
Sbjct: 229 RSD 231
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +2
Query: 374 DKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTYVNQW 553
D+D+SG I + EL +A + G S CNL + FD+ + D+F + +
Sbjct: 192 DRDRSGTIDAGELNTAF-STFGYRLSPQFCNLCVQKFDRSDRNTMKFDDFIQCCVMLKSL 250
Query: 554 LAVFKTYDTDQSG 592
F+ YD QSG
Sbjct: 251 TDAFRKYDVQQSG 263
>SB_53415| Best HMM Match : efhand (HMM E-Value=2.7e-12)
Length = 923
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +2
Query: 476 GMFDKDRNGQINLDEFDKLYTYVNQWLAVFKTYDTDQSGFIDEGELSKALTQMGFRFSPE 655
GMFD+D NG IN EF L+ Y+ W F+ YD D SG ID+ EL Q G+R S +
Sbjct: 20 GMFDRDNNGTINFQEFSSLWKYITDWQTTFRNYDRDSSGTIDKNEL-----QNGYRLSDK 74
Query: 656 FINILTKR 679
F +IL K+
Sbjct: 75 FYSILIKK 82
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +2
Query: 353 QQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKL 532
Q FR D+D SG I EL++ G S+ +++I FD+ G +N D+F +
Sbjct: 46 QTTFRNYDRDSSGTIDKNELQN------GYRLSDKFYSILIKKFDRSGRGVVNFDDFIQC 99
Query: 533 YTYVNQWLAVFKTYDTDQSGFI 598
+ F+ YD +++G+I
Sbjct: 100 CVVIQMLTNAFQAYDNNRNGWI 121
>SB_51782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 54.4 bits (125), Expect = 9e-08
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +2
Query: 506 INLDEFDKLYTYVNQWLAVFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFINILTKRSN 685
+ +EF +L+ +NQW F YD+D+SG ++ EL+ AL G+R SP + +TKR
Sbjct: 1 MGFNEFKELWAALNQWKTTFMQYDSDRSGTMEPHELNNALNAFGYRLSPACLAGITKRYA 60
Query: 686 TND 694
N+
Sbjct: 61 INN 63
>SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21)
Length = 202
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTY 541
F DKD SG IT+ EL ++ + G+ +E MI D D NG +N DEF KL
Sbjct: 56 FEHFDKDSSGSITTREL-GGIMRSLGENPTEIELQDMINSVDCDGNGLMNFDEFVKLMIT 114
Query: 542 VNQW-------LAVFKTYDTDQSGFIDEGELSKALTQM 634
NQ+ L F+ +D D G++ +L L +
Sbjct: 115 KNQFMMDEEDMLEAFRMFDRDGRGYVMSSDLRFVLRHL 152
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 48.4 bits (110), Expect = 6e-06
Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 526
++++ F DKD G I+S+EL + ++ + GQ +E MI D+D NG+I+ EF
Sbjct: 291 ELKEAFALFDKDGGGSISSSEL-AHVMRSLGQNPTEQELKDMIAEVDQDDNGEIDFPEFL 349
Query: 527 KLY------TYVNQWLA-VFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFINILTKRSN 685
++ T + + FK +D + G I EL ++ +G R + + ++ + + ++
Sbjct: 350 QMVAKKIKETDTEEEIQDAFKVFDKNGDGMISSSELKLVMSNLGERLTDDEVDEMIREAD 409
Query: 686 TN-DGKI 703
+ DG I
Sbjct: 410 IDGDGMI 416
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTY 541
F DKD SG I++ EL ++ + GQ S+ MI D D NG+++ +EF +
Sbjct: 6 FSLFDKDGSGTISNEELE-VVMKSLGQNPSDEELQQMIQEVDADGNGEVDFEEFLAMMKK 64
Query: 542 VNQ-------WLAVFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFINILTKRSNTN-DG 697
Q F+ +D + G I E EL + +G + S + I + + ++ + DG
Sbjct: 65 QMQHRDAEAEMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKEMMREADLDGDG 124
Query: 698 KIS 706
I+
Sbjct: 125 VIN 127
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDE 520
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D +GQ+N DE
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYDE 130
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDE 520
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D +GQ+N DE
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYDE 130
>SB_27027| Best HMM Match : efhand (HMM E-Value=8.7e-08)
Length = 103
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +2
Query: 374 DKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 523
D+D SG+I+ ELR + ++ G+ SE +I MFDK+++GQ++ +EF
Sbjct: 4 DRDGSGYISPEELRYVVCHS-GEKLSEDEARELIDMFDKNKDGQLSWEEF 52
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +2
Query: 350 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 523
++Q FR D++ G+I++ ELR A V G ++ +IGM D+D +G++ +EF
Sbjct: 219 LRQAFRVFDRNGDGYISAEELRVA-VTTLGDALTQDEAEELIGMLDQDGDGKLGYEEF 275
Score = 33.1 bits (72), Expect = 0.23
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +2
Query: 377 KDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTYV---- 544
+++ G I TE L A G T + + ++ FDK+ +G I+ DEF + Y
Sbjct: 153 RNKDGTIDHTEFGRVL-QAIGYTPTISQILDILNAFDKNGDGAIDFDEFVTMSRYFRGRG 211
Query: 545 -----NQWLAVFKTYDTDQSGFIDEGELSKALTQMGFRFS-PEFINILTKRSNTNDGKI 703
F+ +D + G+I EL A+T +G + E ++ DGK+
Sbjct: 212 AEKLEENLRQAFRVFDRNGDGYISAEELRVAVTTLGDALTQDEAEELIGMLDQDGDGKL 270
>SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31)
Length = 156
Score = 42.3 bits (95), Expect = 4e-04
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Frame = +2
Query: 350 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF-- 523
V+ F DKD SG + TE+ L G + L++ DKD +G ++ DEF
Sbjct: 16 VKSLFTKYDKDGSGRLQKTEMMELLKVDLGLDDKQAETFLLL--VDKDGSGSVSFDEFYT 73
Query: 524 ------------DKL-YTYVNQWLAVFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFIN 664
DK Y + + + +FK YD D SG ID E + + + G + + +
Sbjct: 74 WIHDKNTLQNIDDKSRYHKIRKAIEMFKKYDKDASGSIDREEFKQLMHETGNKVNID--K 131
Query: 665 ILTKRSNTNDGKIS 706
L K +G+IS
Sbjct: 132 ALKKLDKDGNGQIS 145
Score = 31.5 bits (68), Expect = 0.69
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 356 QWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 523
+ F+ DKD SG I E + + +T ++ + + DKD NGQI+ EF
Sbjct: 98 EMFKKYDKDASGSIDREEFKQLM----HETGNKVNIDKALKKLDKDGNGQISFTEF 149
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLD 517
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D +GQ+N +
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYE 140
>SB_18942| Best HMM Match : efhand (HMM E-Value=1.7e-30)
Length = 233
Score = 41.9 bits (94), Expect = 5e-04
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF-DKLYT 538
F D D+SG I ELR A+ G S+ MI D D++G+I DEF D + +
Sbjct: 96 FDTFDTDKSGSIDGRELRKAM-RTLGFKISKEGIAGMIADLDADQSGRIEFDEFLDFIIS 154
Query: 539 YVNQWLAV-------FKTYDTDQSGFIDEGELSKALTQMGFRFS-PEFINILTKRSNTND 694
+ V FK +DTDQSG I L + G + + E ++ + D
Sbjct: 155 KQSDGRDVHDEIVQGFKMFDTDQSGRITLENLKQVSRMCGVKLNETELKEMILEADKDGD 214
Query: 695 GKI 703
I
Sbjct: 215 SSI 217
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2
Query: 560 VFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFI 661
VF T+DTD+SG ID EL KA+ +GF+ S E I
Sbjct: 95 VFDTFDTDKSGSIDGRELRKAMRTLGFKISKEGI 128
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +2
Query: 329 GGTITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQI 508
G + ++ Q F+ D DQSG IT L+ + G +ET MI DKD + I
Sbjct: 159 GRDVHDEIVQGFKMFDTDQSGRITLENLKQ-VSRMCGVKLNETELKEMILEADKDGDSSI 217
Query: 509 NLDEFDKLYTYVN 547
+ DEF + N
Sbjct: 218 DQDEFINMMLKTN 230
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 41.5 bits (93), Expect = 6e-04
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 526
Q+++ F DK I S++L L GQ + ++ D + +I+ +EF
Sbjct: 12 QLRESFELYDKQGDEKIDSSQLGEVL-RGLGQNPTNAEVKKIVSEMDPEGGNRISFEEFL 70
Query: 527 KLY-TYVNQ--------WLAVFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFINILTKR 679
+Y +Y+ + ++ + +D D SG I+EGEL LT +G + + ++ L +
Sbjct: 71 PVYQSYMGKKPKFSTEDFVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSEVDSLIQG 130
Query: 680 SNTNDGKI 703
G+I
Sbjct: 131 LEDKQGQI 138
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLD 517
++++ FR DKD +GFI++ ELR + N G+ ++ MI D D +GQ+N +
Sbjct: 49 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVEEMIMEADIDGDGQVNYE 104
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 526
Q ++ F D D SG +T+ EL A+ G +E M+ D D NG ++ +EF
Sbjct: 149 QYKEAFHMYDADGSGHVTTKELHKAM-RTLGFNPTEEEIQEMVNEVDYDGNGVLDFNEFV 207
Query: 527 KLYTYVNQ-------WLAVFKTYDTDQSGFIDEGELSKALTQM 634
L + + F +D+D G+I+ EL L M
Sbjct: 208 DLMENQKKPDEEEQDLINAFHVFDSDDKGYIEASELRDLLCGM 250
Score = 31.5 bits (68), Expect = 0.69
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 539 YVNQWLAVFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFI 661
Y Q+ F YD D SG + EL KA+ +GF + E I
Sbjct: 146 YNAQYKEAFHMYDADGSGHVTTKELHKAMRTLGFNPTEEEI 186
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKL 532
F D D G+I ++ELR L + + E M+ + D++ ++ L EF +L
Sbjct: 227 FHVFDSDDKGYIEASELRDLLCGME-KKIPEDELQDMLRYYGLDKDRRVLLMEFAEL 282
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/84 (28%), Positives = 44/84 (52%)
Frame = +2
Query: 353 QQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKL 532
++ F D D+ G+IT T+L V+ F + +L+ D+D NG++ LDEF
Sbjct: 426 RELFYLCDSDRKGYITKTDLHRVAVDLS-LNFDQL--DLIFNQLDQDGNGRLTLDEF--- 479
Query: 533 YTYVNQWLAVFKTYDTDQSGFIDE 604
++L+ ++ D +GFI++
Sbjct: 480 VLGFGKFLSGAESEDEQSNGFIED 503
Score = 28.3 bits (60), Expect = 6.5
Identities = 25/100 (25%), Positives = 43/100 (43%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 526
QVQQ F +D DQ+G++T E + L +G+ D +G +LDE
Sbjct: 376 QVQQAFSKLDDDQNGYLTLEEFTAGF-------------GLFLGLDGVDNDG--DLDEI- 419
Query: 527 KLYTYVNQWLAVFKTYDTDQSGFIDEGELSKALTQMGFRF 646
+ +F D+D+ G+I + +L + + F
Sbjct: 420 ---ATSDPGRELFYLCDSDRKGYITKTDLHRVAVDLSLNF 456
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 371 VDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLY 535
VD D+ GF+T ELR L+N + +T N + D +++G+++ +EF K +
Sbjct: 567 VDLDKDGFVTEDELRLRLLNT-SRKHRKTEVNSTVTFHDDNKDGKVSWEEFKKAH 620
>SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24)
Length = 176
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTY 541
FR +D D SG ++ E S L Q + +I +FD D NG+++ EF + +
Sbjct: 48 FRKLDLDNSGSLSVEEFMS-LPELQQNPLVQR----VITIFDADGNGEVDFKEFIEGVSQ 102
Query: 542 VN-------QWLAVFKTYDTDQSGFIDEGELSKALTQM 634
+ + F+ YD D G+I GEL + L M
Sbjct: 103 FSVKGDKESKLKFAFRIYDMDNDGYISNGELFQVLKMM 140
>SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 842
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTY 541
F+ D+D+SG + + ELR AL A G T S + + + +G++N+D+F ++ T
Sbjct: 716 FQVFDEDKSGEMDTYELRGALKEA-GFTLSNSVLYAVSARYSTG-DGKVNVDDFMEILTR 773
Query: 542 VNQWLAVFK 568
+N A F+
Sbjct: 774 LNILSAAFQ 782
>SB_8171| Best HMM Match : efhand (HMM E-Value=6.6e-12)
Length = 77
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 350 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 523
+++ F D D +G IT EL A+ +A G +I +DKD+NG I DEF
Sbjct: 19 LKESFDEFDVDHNGHITVKEL-GAVFSAAGAEVPGYKVREVISEYDKDQNGTIEFDEF 75
>SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 353 QQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFD-KDRNGQINLDEFDK 529
+ +F DKD+ GFI EL AL + Q+ + N ++GM + ++ + +I+L +F
Sbjct: 315 RHYFTKNDKDKDGFINHRELLKALRDLYAQSITVEQVNAILGMLEIEEMSKKIDLSKFLA 374
Query: 530 LYTYVNQWLAVF 565
+ + ++ F
Sbjct: 375 IAAFSERFFYCF 386
>SB_42269| Best HMM Match : efhand (HMM E-Value=4.8e-05)
Length = 901
Score = 35.1 bits (77), Expect = 0.056
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 326 VGGTITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIG--MFDKDRN 499
+G I ++ +R D D G I+ TE+ LV+ FSE M+ DK+ N
Sbjct: 181 IGMKIEATTEETYREWDYDGDGVISVTEIMHNLVDLSDLYFSEDDVKTMLRDLNIDKNGN 240
Query: 500 GQINLDEF 523
G ++L+EF
Sbjct: 241 GVMDLNEF 248
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 35.1 bits (77), Expect = 0.056
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 526
+++ F DKD SG I + ELR ++ G+ S+ MI DKD +G+I +F
Sbjct: 4 EMRDVFSMFDKDNSGSIDTDELRD-VMRELGENPSDKEIQDMIADADKDGSGEIRFAQFM 62
Query: 527 KL 532
+L
Sbjct: 63 QL 64
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 34.7 bits (76), Expect = 0.074
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 338 ITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLD 517
+T ++++ F+ +D+D SG+I E+ +AL S ++ GM D + + +I+ D
Sbjct: 66 VTLRLEKIFQEIDEDNSGYIDHNEISNALKKLDINLPSRQIDGILKGM-DLNNDNRIDFD 124
Query: 518 EF 523
EF
Sbjct: 125 EF 126
>SB_4349| Best HMM Match : efhand (HMM E-Value=0.00066)
Length = 188
Score = 34.7 bits (76), Expect = 0.074
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 464 NLMIGMFDKDRNGQINLDEFDKLYTYVNQWLAVFKTY----DTDQSGFIDEGELSKALTQ 631
N + D+D G + DE +K + V L K + D Q+G +D GEL+K
Sbjct: 108 NAFFDVLDEDNLGYVTQDELEKFFRAVKTELKAAKVWSDNADLKQNGKLDRGELTK--NS 165
Query: 632 MGFRFSP 652
F F+P
Sbjct: 166 FNFWFNP 172
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 34.3 bits (75), Expect = 0.098
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 526
+ ++ F D D++G I S EL S + A GQ +E MI D+ L
Sbjct: 11 EYKEAFNMFDNDRNGTICSHELGSVM-RALGQNPTEDMIRDMIASADRTEF----LSMMC 65
Query: 527 KLYTYVNQWLAV-FKTYDTDQSGFIDEGELSKALTQMGFRFSPEFI-NILTKRSNTNDGK 700
+ + Q + + FK+ D D GFI G+L K + + S + + ++ DG+
Sbjct: 66 TVQSGKTQEIRMAFKSMDKDGDGFITFGDLKKTMQECDENLSDDDLKRMIIDADLDEDGR 125
Query: 701 IS 706
+S
Sbjct: 126 VS 127
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 341 TPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQIN 511
T +++ F+++DKD GFIT +L+ + + S+ MI D D +G+++
Sbjct: 72 TQEIRMAFKSMDKDGDGFITFGDLKKTMQECD-ENLSDDDLKRMIIDADLDEDGRVS 127
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 523
F+ D++ +G I + ELR L + + E NLM+G +D GQ+ ++F
Sbjct: 11 FKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNLMVGF--EDNQGQVFYEDF 62
>SB_37032| Best HMM Match : efhand (HMM E-Value=4.7e-35)
Length = 552
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 523
++++ FRA+DKD SG + R L + E + + +DKD G+I+ +EF
Sbjct: 489 EMRRAFRAIDKDGSGLCNPLDFRQMLKRFKIDLNEEEFFH-VYSFYDKDMTGKISYNEF 546
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 563 FKTYDTDQSGFIDEGELSKALTQMGFRFSPEFINILTKR 679
F+ D ++ GFI+ EL K L + + NIL +R
Sbjct: 22 FEAVDVNRDGFINRAELQKVLFDFHYFLDEQQFNILLER 60
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 526
+++ + DKD SG I E + + +E+ +FDKD NG I+ E
Sbjct: 52 ELKAMIKQADKDGSGDIDLPEFIELMASKSKNDTTESDLREAFSLFDKDGNGLISAQEMK 111
Query: 527 KLYTYV------NQWLAVFKTYDTDQSGFIDEGELSKA 622
++T + + + + K D D G I+ E A
Sbjct: 112 FVFTCMGFNITEKEAVELVKQADMDGDGHINYEEFKNA 149
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 526
+++ + DKD SG I E + + +E+ +FDKD NG I+ E
Sbjct: 181 ELKAMIKQADKDGSGDIDLPEFIELMASKSKNDTTESDLREAFSLFDKDGNGLISAQEMK 240
Query: 527 KLYT 538
+ T
Sbjct: 241 FVLT 244
>SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23)
Length = 308
Score = 32.3 bits (70), Expect = 0.40
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYT- 538
F A D ++ GF+T E+ L SE I D+D++G I+L EF Y
Sbjct: 155 FDAADTNKDGFLTREEMAIFLHPESSPEMSEVHILETIEDIDRDKDGLISLKEFLGEYEE 214
Query: 539 ---YVNQWL-----AVFKTYDTDQSGFIDEGELSK-ALTQMGFRFSPEFINILTKRSNTN 691
V W+ + YD ++ G +D+ E+ L + + E L ++ N
Sbjct: 215 EPGEVPDWVKDETNRFNEEYDKNKDGKLDKSEVRLWILPETDHLMAAEEAKHLVSSADDN 274
Query: 692 -DGKIS 706
DGK++
Sbjct: 275 SDGKLT 280
>SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08)
Length = 676
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 523
F DKD S +T E + L G S+ ++I + D+D +G+I+ EF
Sbjct: 611 FNQFDKDNSLSVTRDEFYTGLKGI-GVPMSDKDLTMLIDLLDEDGDGEIDFSEF 663
>SB_30167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 545 NQWLAVFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFIN-ILTKRSNTNDGKIS 706
N+ L F+T+D D G+I E+ L MG IN IL S+ KI+
Sbjct: 13 NELLEAFRTFDGDDKGYIFSNEIRYVLRHMGENIPEHDINDILKDASHGRKRKIT 67
>SB_56183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 31.1 bits (67), Expect = 0.92
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 557 AVFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFINILTKRSNTN-DGKIS 706
A F+ YD D+SG I EL+ TQ PE + L + + DG+I+
Sbjct: 329 AAFEHYDKDKSGKICLDELTTTCTQFNLPVEPELLESLLHYCDADKDGQIN 379
>SB_27850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 716
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 431 AQGQTF-SETACNLMIGMFDKDRNGQINLDEFDKLYTYVNQWLAVFKTYDTD 583
A+G+ ++ CN +I FD D +GQI+ EF+ Y+ ++ +V++ Y D
Sbjct: 270 AEGKEIQADEDCNNLIRDFDSDSDGQISPYEFN---LYIEEYSSVYRYYLED 318
>SB_49674| Best HMM Match : efhand (HMM E-Value=2e-13)
Length = 105
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 551 WLAVFKTYDTDQSGFIDEGELSKALTQM 634
++ +FK YDTD+SG+I+ EL L +
Sbjct: 26 FMKIFKKYDTDKSGYIEVPELKVFLMDL 53
>SB_53403| Best HMM Match : efhand (HMM E-Value=2.8e-12)
Length = 146
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Frame = +2
Query: 500 GQINLDEFDKLYTYV------NQWLAVFKTYDTDQSGFIDEGELSKALT 628
G + L EF +Y N L VF+T+D D+SG ID E +L+
Sbjct: 41 GYVTLQEFQNMYAEFFDGDASNFALHVFRTFDDDRSGRIDFKEFMSSLS 89
>SB_45405| Best HMM Match : Calpain_III (HMM E-Value=6.1e-07)
Length = 363
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 557 AVFKTYDTDQSGFIDEGELSKAL 625
A+FK YD D+SG I+ EL +AL
Sbjct: 212 AIFKRYDIDESGSIEAFELRQAL 234
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 347 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 523
++ + F+ D D++G I+ L+ + G+ ++ MI D+D +G+IN EF
Sbjct: 60 EILKAFKLFDDDETGKISFKNLKR-VAKELGENLTDEELQEMIDEADRDGDGEINEAEF 117
>SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37)
Length = 732
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 209 TFSETLQMAYNSGYPGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQ 349
+F + + +SG+ GQ G P GQ HG G+GG + Q
Sbjct: 608 SFGQAAPTSQSSGFGGQGGMFGTPGGQQSGFHGGIGGGGMGGGFSGQ 654
>SB_27337| Best HMM Match : efhand (HMM E-Value=2.9e-21)
Length = 172
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Frame = +2
Query: 479 MFDKDRNGQINLDEFDKLYTYVNQWLA------VFKTYDTDQSGFIDEGELSKALTQMGF 640
+FD D N +N+DEF K L +F +D D SG +D E +A+
Sbjct: 46 IFDDDGNRALNIDEFRKGMQDFGTKLTDDEVKQLFAQFDKDGSGSLDFEEFLRAVRPSMS 105
Query: 641 RFSPEFI-NILTKRSNTNDGKIS 706
+ E I K T DG I+
Sbjct: 106 KNRVEIIMKAFHKMDTTGDGVIT 128
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 523
FR D D + + E R + + G ++ + FDKD +G ++ +EF
Sbjct: 44 FRIFDDDGNRALNIDEFRKGMQDF-GTKLTDDEVKQLFAQFDKDGSGSLDFEEF 96
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 365 RAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLD 517
R D+D +G + + ELRS L++ G+ S+ + D D +G IN +
Sbjct: 596 RVFDRDGTGTVLAAELRSVLMSL-GEKLSDEEVTTLFAPVD-DSSGHINYE 644
>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/127 (18%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Frame = +2
Query: 347 QVQQWFRAVDKD-QSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 523
++Q+WF A + G ++ ++ + + + FDK+ +G I+ +EF
Sbjct: 29 ELQKWFAAFKNNCPKGKMSQSKFCEMYAKSYKTGDASIFAGHVFRTFDKNNDGTIDFNEF 88
Query: 524 DKLYTYVNQWLA------VFKTYDTDQSGFIDEGELSKALTQMGFRFSPEFINILTKRSN 685
+ + +++ F+ YD+D SG + + E+ + + + FR + E + R
Sbjct: 89 IQGLSIISRGSKETKLRWAFEIYDSDGSGEVSKKEMLEIVRSI-FRLAGEEVTAKLPRDE 147
Query: 686 TNDGKIS 706
K +
Sbjct: 148 NTPEKFT 154
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 563 FKTYDTDQSGFIDEGELSKALTQMGFRF-SPEFINILTKRSNTNDGKIS 706
F +DTD+ ID EL A+ +GF + + I+ + GKIS
Sbjct: 35 FNLFDTDKDQAIDYHELKVAMRALGFDVKKADVLKIMKDYDRESTGKIS 83
>SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 563 FKTYDTDQSGFIDEGELSKALTQMGFRF-SPEFINILTKRSNTNDGKIS 706
F +DTD+ ID EL A+ +GF + + I+ + GKIS
Sbjct: 35 FNLFDTDKDQAIDYHELKVAMRALGFDVKKADVLKIMKDYDRESTGKIS 83
>SB_31141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 362 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDK 529
F D D SG+I EL +A+ + + E + D DR+G+I+++EF +
Sbjct: 14 FGTCDLDGSGYIDKQEL-AAVCDLDAEDLGE-----VFNKLDADRDGRISIEEFSE 63
>SB_59144| Best HMM Match : efhand (HMM E-Value=0.093)
Length = 240
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 548 QWLAVFKTYDTDQSGFIDEGELSKALTQMGFRFSPE 655
QW+ F+ YDTD + + K + + G +F E
Sbjct: 64 QWMEAFQEYDTDGLYKVTRADFVKGIKKSGLQFDIE 99
>SB_57618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 293 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 424
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 96 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 143
>SB_49134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 293 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 424
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 917 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 964
>SB_38969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 293 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 424
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 32 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 79
>SB_37793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 293 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 424
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 470 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 517
>SB_22989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 293 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 424
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 66 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 113
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 293 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 424
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 176 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 223
>SB_20632| Best HMM Match : Cu_bind_like (HMM E-Value=0.51)
Length = 388
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 293 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 424
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 176 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 223
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,669,847
Number of Sequences: 59808
Number of extensions: 446925
Number of successful extensions: 1147
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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