Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0559
         (644 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          26   0.36 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      26   0.36 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          26   0.36 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.1  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +3

Query: 531 IEAR*YNL----FTMYLTISTDRNSVSNVRIYLTNMYQHLSN 644
           I+AR Y L    FT ++ +++D+N    VRI+L   Y    +
Sbjct: 486 IKARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYDEFGH 527


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +3

Query: 531 IEAR*YNL----FTMYLTISTDRNSVSNVRIYLTNMYQHLSN 644
           I+AR Y L    FT ++ +++D+N    VRI+L   Y    +
Sbjct: 486 IKARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYDEFGH 527


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +3

Query: 531 IEAR*YNL----FTMYLTISTDRNSVSNVRIYLTNMYQHLSN 644
           I+AR Y L    FT ++ +++D+N    VRI+L   Y    +
Sbjct: 112 IKARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYDEFGH 153


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 453 NDFLICHLKIFNNIEKRLN 397
           N+  I  LK FNN+ K+LN
Sbjct: 510 NEEQIVDLKAFNNVPKKLN 528


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 453 NDFLICHLKIFNNIEKRLN 397
           N+  I  LK FNN+ K+LN
Sbjct: 510 NEEQIVDLKAFNNVPKKLN 528


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,946
Number of Sequences: 438
Number of extensions: 2704
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)