Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0558
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   215   1e-57
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...   151   2e-38
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            80   8e-17
AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450 pr...    25   2.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   5.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   5.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   5.4  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   7.1  
AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450 CY...    23   9.4  
AY062197-1|AAL58558.1|  150|Anopheles gambiae cytochrome P450 CY...    23   9.4  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   9.4  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  215 bits (525), Expect = 1e-57
 Identities = 97/168 (57%), Positives = 121/168 (72%)
 Frame = +3

Query: 117 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 296
           K V+VGDG  GKTC+LI ++ D FP  YVPT F+NY A + VDG QV L LWDTAGQEDY
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDY 67

Query: 297 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPA 476
           DRLRPLSYP TDV L+C+SV SP S EN+  KW PE+KH CP+ PIILVG K DLR D  
Sbjct: 68  DRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRE 127

Query: 477 TINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETA 620
           TI+ L       +K ++G+ +A KI A  Y+ECSA ++ G+++VF+ A
Sbjct: 128 TISLLADQGLSALKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEA 175


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score =  151 bits (367), Expect = 2e-38
 Identities = 67/134 (50%), Positives = 96/134 (71%), Gaps = 1/134 (0%)
 Frame = +3

Query: 276 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 455
           +AGQEDYDRLRPLSYP TDV L+CFSV SP S EN+ EKW PE+ H C   P +LVG + 
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQI 60

Query: 456 DLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL 635
           DLR++ +T+ +L K KQ+P+  ++G  +A+++ A  Y+ECSA +++G++ VF+ A  AAL
Sbjct: 61  DLRDENSTLEKLAKNKQKPITLEQGEKLAKELKAVKYVECSALTQKGLKNVFDVAILAAL 120

Query: 636 Q-VKKKKKTRCSLL 674
           +  +  KK +C  L
Sbjct: 121 EPPEPTKKRKCRFL 134


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 79.8 bits (188), Expect = 8e-17
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 2/167 (1%)
 Frame = +3

Query: 117 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 293
           KLV++G+ A GK+ L++ F K QF E    T+   ++   + +D   V+  +WDTAGQE 
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85

Query: 294 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 470
           Y  L P+ Y      ++ + + + DS     + W  E+ +   PN+ I L GNK DL N 
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFAR-AKTWVKELQRQASPNIVIALAGNKADLAN- 143

Query: 471 PATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVF 611
                         V  +E +  A+  N   ++E SAK+   V ++F
Sbjct: 144 -----------SRVVDYEEAKQYADD-NRLLFMETSAKTAVNVNDIF 178


>AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 354 PRST*GSHPYLDTRAAAADRNLLGQRYPTEPVPLVF-HPLR 235
           P  + G HP+     +   R+ +G+RY  + + LV  H LR
Sbjct: 64  PERSQGRHPHAYAPFSMGSRDCIGKRYAIQGMKLVLVHLLR 104


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +3

Query: 549  INAFAYLECSAKSKEGVREVFETATRAALQVK----KKKKTRCSLL*VCC 686
            + A   L+   +  +   E FE A + A + K    K K  RC+L   CC
Sbjct: 1025 MKAMQKLDRVTEKIQSTNEEFEAARKKAKKAKAAFEKVKNERCTLFTNCC 1074


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -3

Query: 393 TSLGCSRANP-ASPPRST*GSH 331
           T   CS A+   SPPRS  GSH
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSH 308


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -3

Query: 393 TSLGCSRANP-ASPPRST*GSH 331
           T   CS A+   SPPRS  GSH
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSH 308


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +1

Query: 160 C**CSARINSRKYTCRQCLRITLPTSKWMENKWNWLCGIPLAK 288
           C  C    + +K+ C Q     + T  W  N  NW   I +A+
Sbjct: 257 CAECRGLFSPQKFVCHQHEPQEIRTCHWGFNSSNWRSYIHVAE 299


>AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450
           CYP4C26 protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 354 PRST*GSHPYLDTRAAAADRNLLGQ 280
           P +  G HPY      A  RN +GQ
Sbjct: 126 PENCHGRHPYAYIPFTAGPRNCIGQ 150


>AY062197-1|AAL58558.1|  150|Anopheles gambiae cytochrome P450
           CYP4C27 protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 354 PRST*GSHPYLDTRAAAADRNLLGQ 280
           P +T   HPY      A  RN +GQ
Sbjct: 126 PENTENRHPYAYIPFTAGPRNCIGQ 150


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 617 CFKHLTYTFLAFGRAFQIC 561
           C +   YTFL FG   +IC
Sbjct: 421 CRQRAPYTFLPFGAGPKIC 439


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,042
Number of Sequences: 2352
Number of extensions: 16084
Number of successful extensions: 49
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)