Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0557
(658 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 29 0.034
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 28 0.078
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 26 0.31
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 26 0.31
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 23 2.2
DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory pro... 23 2.9
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 23 2.9
DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory pro... 22 5.1
EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine vasopre... 21 6.7
AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical pro... 21 6.7
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 21 6.7
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 21 8.9
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 29.1 bits (62), Expect = 0.034
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 SSVFVVLMQVYSRVFLVCGALLATQGATTSPXLPLCILAWSITEIIRYAYYALNLV---D 467
+SV +L + R + +C L A T + +C+LAW I + A+ +
Sbjct: 156 ASVLTILAISFERYYAICKPLKAGYICTKTRASLICLLAWFIAALFTSPILAITQYGPEE 215
Query: 468 IVPSSLTFLRYS 503
V S+ F+ +S
Sbjct: 216 YVDGSIVFVCFS 227
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 27.9 bits (59), Expect = 0.078
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 297 SSVFVVLMQVYSRVFLVCGALLATQGATTSPXLPLCILAWSITEI 431
+SV +L + R + +C L A T + +C+LAW I +
Sbjct: 156 ASVLTILAISFERYYAICKPLKAGYICTKTRASLICLLAWFIAAL 200
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.8 bits (54), Expect = 0.31
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 180 VHFLNRTLDAFWSEI 224
VH+LNR + FW+E+
Sbjct: 1185 VHYLNRNEETFWNEL 1199
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 25.8 bits (54), Expect = 0.31
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 180 VHFLNRTLDAFWSEI 224
VH+LNR + FW+E+
Sbjct: 1185 VHYLNRNEETFWNEL 1199
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 23.0 bits (47), Expect = 2.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 2 TREDFV*KISLNIKFYINLNNVQQGNEKQHLWTFDW 109
TRE+ K N+K + NL Q E L DW
Sbjct: 370 TREEIHEKARENLKHHANLRQKNQKGEVTVLEIEDW 405
>DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory
protein 10 protein.
Length = 129
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 520 IPSVLLESCSACTTHWMKSSRK 585
+P L CS CT + SRK
Sbjct: 67 LPDALHSGCSKCTEKQKEGSRK 88
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 549 CMYHSLDEIFEKKLFTISMPNAWNFAFN 632
C Y+SLD++ E + I + W +F+
Sbjct: 115 CSYYSLDDLSEDTFYDIRL---WGVSFS 139
>DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory
protein 1 protein.
Length = 112
Score = 21.8 bits (44), Expect = 5.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 523 PSVLLESCSACTTHWMKSSRK 585
P VL SC CT MK +K
Sbjct: 70 PLVLRGSCPQCTPQEMKQIQK 90
>EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine
vasopressin-like peptide protein.
Length = 146
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 373 PCVASKAPHTRNT 335
PC+A AP +NT
Sbjct: 89 PCIAGSAPCRKNT 101
>AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical
protein protein.
Length = 86
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +3
Query: 576 FEKKLFTISMPNAWNFAFNYYYFLIFY 656
+ K +++ N FNYYY+ Y
Sbjct: 45 YVKHFHPLALSNKNAIDFNYYYYAATY 71
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 131 IDKKINLSNRKSR 93
IDKK+N N KSR
Sbjct: 56 IDKKLNNRNSKSR 68
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 91 PLDFRLERFIFLSIT 135
P+DF L FIF S+T
Sbjct: 362 PVDFTLLGFIFGSVT 376
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,742
Number of Sequences: 336
Number of extensions: 3683
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -