Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0557
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    26   0.91 
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   2.1  
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        25   2.8  
AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14...    25   2.8  
AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.            24   3.7  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   3.7  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   6.4  

>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 414 WSITEIIRYAYYALNLVDIVPSSLTFLRYSTFLVMYPL 527
           +S+   ++Y  Y +N +       +  RY  FLVM PL
Sbjct: 104 FSVIGTVKYLRYLMNSITQQSELFSLGRYEMFLVMSPL 141


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +3

Query: 144 TLGWSYMLWQS-LVHFLNRTLDAFWS 218
           T G  ++ W+  L HFL   LDA WS
Sbjct: 386 TRGGLWLSWEEGLQHFLKYLLDADWS 411


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 183 VLMTAIACKTIQEFERRYRQEDKSFQSK 100
           VLM  I+  T+Q F R + +   SF S+
Sbjct: 14  VLMLLISIGTVQPFRRHHLRHQSSFVSR 41


>AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14D
           protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 324 VYSRVFLVCGALLATQGATTSPXLPLC 404
           +Y R  LVC A + ++G T+ P  P C
Sbjct: 74  LYERKTLVCCAGVRSKGKTSLPESPNC 100


>AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +3

Query: 375 ATTSPXLPLCILAWSITEIIRYAYYALNLVDIVPSSLTFLRYSTFLVMYPLGI-TGELLC 551
           ATT   +P  I AW +T       Y L ++   P  LT ++    +   P  I  GEL+ 
Sbjct: 139 ATTKESVPDTITAWHLTGFSIDPVYGLGIIK-QPLQLTTVQPFYIVPNMPYSIKRGELVE 197

Query: 552 MYHSLDEIFEKK 587
           +   +   F KK
Sbjct: 198 LQFIVFNNFPKK 209


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 522  DTSRETWNTSKTSAMRV 472
            DT+ ET+NT+ TS  R+
Sbjct: 1318 DTTHETYNTTATSCERI 1334


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 15/66 (22%), Positives = 30/66 (45%)
 Frame = +3

Query: 45  FISI*TMSNKAMKSNTSGLSIGKIYLLVYNAAQTLGWSYMLWQSLVHFLNRTLDAFWSEI 224
           F S  T+  + +      LS+  + ++  N  Q L W+ ++W +L    +R L    + I
Sbjct: 403 FQSSFTLEQEELTVTVWTLSLPAVVIVHVNQEQ-LAWTTIIWDNLCAKADRKLFEVPNLI 461

Query: 225 KWTVII 242
            W  ++
Sbjct: 462 PWNRLV 467


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,001
Number of Sequences: 2352
Number of extensions: 15070
Number of successful extensions: 42
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)