Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0554
(701 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 24 1.0
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 24 1.0
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 24 1.0
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 24 1.0
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 2.4
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 2.4
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 2.4
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 23 3.2
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 22 5.6
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 22 5.6
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 7.4
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 92 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 226
H HH + F + + ++ + S++ + AAA+D T+ CR
Sbjct: 9 HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 52
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 92 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 226
H HH + F + + ++ + S++ + AAA+D T+ CR
Sbjct: 68 HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 111
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 92 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 226
H HH + F + + ++ + S++ + AAA+D T+ CR
Sbjct: 9 HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 52
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 92 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 226
H HH + F + + ++ + S++ + AAA+D T+ CR
Sbjct: 68 HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 111
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 51 NGALTGQVSPSSQNTNITRHQSL 119
NG + P Q T TRHQ L
Sbjct: 224 NGTFAPGMEPKRQRTAYTRHQIL 246
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 51 NGALTGQVSPSSQNTNITRHQSL 119
NG + P Q T TRHQ L
Sbjct: 224 NGTFAPGMEPKRQRTAYTRHQIL 246
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 51 NGALTGQVSPSSQNTNITRHQSL 119
NG + P Q T TRHQ L
Sbjct: 224 NGTFAPGMEPKRQRTAYTRHQIL 246
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 22.6 bits (46), Expect = 3.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 149 IITTMSASQKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLL 274
IIT M+ +Q +W A E ++ E ++ +DD D L
Sbjct: 122 IITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAL 163
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 402 VNANKRIFSPTG*RKKLTSLRSSKTFLKFLNAW 500
+ AN+ F TG L L +K + KF+ W
Sbjct: 84 LEANRLFFFLTGVMASLLFLNLAKRWPKFVKDW 116
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 402 VNANKRIFSPTG*RKKLTSLRSSKTFLKFLNAW 500
+ AN+ F TG L L +K + KF+ W
Sbjct: 84 LEANRLFFFLTGVMASLLFLNLAKRWPKFVKDW 116
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = +2
Query: 530 SSPFVTSQPTEELLREFETVYGAVELTHLTPPQSPPGP 643
+SP+ +P L VY + P S PGP
Sbjct: 265 ASPYPMQRPKSASLSPPPHVYNPPDHIQQATPYSAPGP 302
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,192
Number of Sequences: 336
Number of extensions: 3230
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -