Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0554
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer ... 36 0.021
U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer ... 36 0.021
AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform... 36 0.021
L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z83233-8|CAB05759.2| 378|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 4.3
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 4.3
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 4.3
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 4.3
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.3
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.3
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 4.3
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.3
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 28 5.6
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 25 6.1
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 25 6.1
AF016685-16|AAG24152.2| 328|Caenorhabditis elegans Serpentine r... 28 7.4
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81577-3|CAB04649.1| 528|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 27 9.8
>U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform b protein.
Length = 557
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 509 PPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 625
PP AV +SPFV E+ E+ +YG + HL+ P
Sbjct: 97 PPMAVFGNSPFVNILTPEQTFLEYREIYGPIFTLHLSQP 135
>U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform a protein.
Length = 572
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 509 PPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 625
PP AV +SPFV E+ E+ +YG + HL+ P
Sbjct: 112 PPMAVFGNSPFVNILTPEQTFLEYREIYGPIFTLHLSQP 150
>AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform A
protein.
Length = 557
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 509 PPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 625
PP AV +SPFV E+ E+ +YG + HL+ P
Sbjct: 97 PPMAVFGNSPFVNILTPEQTFLEYREIYGPIFTLHLSQP 135
>L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical
protein F44B9.2 protein.
Length = 503
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 440 EEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETV---YGAVELT 610
+++ D+ I E+ ++ P PA ++ ++P ++ + +L+ ET+ G E+T
Sbjct: 3 DDEDDIVWIREDTAQSSVPTSPTTPATIIEAAPVLSDAFDKPILKSVETISVSNGPPEVT 62
Query: 611 HLTPPQSPP 637
PP +PP
Sbjct: 63 ISAPPPTPP 71
>Z83233-8|CAB05759.2| 378|Caenorhabditis elegans Hypothetical
protein K06B4.8 protein.
Length = 378
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 88 KTPTSLDINPSGLLFAFVELNHYNNEC 168
KTP LD +L+ F+ELN N EC
Sbjct: 232 KTPALLDQTSCMVLYKFIELNITNEEC 258
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 443 EKVDLPSIFENISEVPERVDPQPPAAV 523
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 377 NDLLQQLDSQCKQENIFSNWLEEKVDLPS 463
N +Q++D+ C +NI + K+D+P+
Sbjct: 103 NHWMQEVDTYCTNDNIIKMMVANKIDMPN 131
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 24.6 bits (51), Expect(2) = 6.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 231 CSKLRISSMMIVICLKTFRALQRRSKSITPR 323
C LRI M + LK F +++ + TPR
Sbjct: 559 CGTLRIQGMKMSKSLKNFITIRKALEDYTPR 589
Score = 21.8 bits (44), Expect(2) = 6.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 204 CSLTMSAVCCSKLRI 248
CS+ SA+C SKL I
Sbjct: 510 CSVMSSAICGSKLDI 524
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 24.6 bits (51), Expect(2) = 6.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 231 CSKLRISSMMIVICLKTFRALQRRSKSITPR 323
C LRI M + LK F +++ + TPR
Sbjct: 558 CGTLRIQGMKMSKSLKNFITIRKALEDYTPR 588
Score = 21.8 bits (44), Expect(2) = 6.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 204 CSLTMSAVCCSKLRI 248
CS+ SA+C SKL I
Sbjct: 509 CSVMSSAICGSKLDI 523
>AF016685-16|AAG24152.2| 328|Caenorhabditis elegans Serpentine
receptor, class x protein1 protein.
Length = 328
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 246 ISSMMIVICLK-TFRALQRRSKSITPRVSTRHHRRS*NQ 359
+SS++ VIC F ++ KSITP ++ H +R Q
Sbjct: 186 LSSIVPVICYSWIFYTIRSAHKSITPNMAPEHQKRQGRQ 224
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 386 LQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQ 508
+ Q++SQ E SN+ E++ P +N+S+ ++ PQ
Sbjct: 593 VSQVNSQADFEAFLSNYPEQRQAAPQNTQNVSQKTQQTRPQ 633
>Z81577-3|CAB04649.1| 528|Caenorhabditis elegans Hypothetical
protein R11.3 protein.
Length = 528
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 575 PAAVLQWAARSQKDLKLEPLPGVVGPRVQELQ--KCFRRSKGGQLFPLTSWRK 423
PA L WA RSQ + + P V P V + Q K +R+ KG L W +
Sbjct: 405 PAMKLAWALRSQLESEQAP-AAVFDPMVVDKQQRKKYRKKKGTNLDYKMIWEE 456
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 386 LQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQ 508
+ Q++SQ E SN+ E++ P +N+S+ ++ PQ
Sbjct: 593 VSQVNSQADFEAFLSNYPEQRQAAPQNTQNVSQKTQQTRPQ 633
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,335,789
Number of Sequences: 27780
Number of extensions: 306809
Number of successful extensions: 1127
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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