Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0552
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.9  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = -2

Query: 265 RTSGSMSSLQGIYVGRP*PDTRPMPIHPLWYVSWSA--RNSHLKLLAP 128
           R S S SS   + + +P   + P   HP W  +W +  R+S  +  AP
Sbjct: 52  RESLSPSSAHTVLIPQPLHPSVPRLGHPQWPFAWGSLXRSSSPQTSAP 99


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -3

Query: 270 VLAHRVQCHH-FKGYTLDVRNQTPGPCPSTHY 178
           ++A     HH   GY L  RN  P P PST Y
Sbjct: 184 MVAETASFHHDAAGYGL--RNYGPEPVPSTPY 213


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 521 TSGAATSRTKPANWSLSLYTSSTVRVPR 438
           TS ++T+  KP +  L++    T+ +PR
Sbjct: 431 TSTSSTNSNKPNSSDLNMLIKETMPLPR 458


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 187 HPLWYVSWSARNS 149
           +PL Y SW++R S
Sbjct: 144 YPLTYCSWTSRRS 156


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 175 TIVGGWAWAWCLVTDVQRIS 234
           T+VGG  +A+CL+  ++ ++
Sbjct: 80  TLVGGPEYAYCLLPPLESLA 99


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 633 SVPLHVGRLRLPQAGQILDIV 571
           S+P  VG   +P    +LDI+
Sbjct: 177 SIPGEVGGYDIPAMSNVLDII 197


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 356  PASSSWARPSK 388
            P++SSW +P+K
Sbjct: 1161 PSTSSWQKPTK 1171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,249
Number of Sequences: 336
Number of extensions: 4053
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)