Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0552
(665 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 27 0.53
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 25 2.1
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 24 5.0
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.0
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.0
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.0
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 24 5.0
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 23 6.5
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 23 6.5
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 23 8.7
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 27.1 bits (57), Expect = 0.53
Identities = 24/91 (26%), Positives = 34/91 (37%)
Frame = -1
Query: 311 TPVTVSGTPWAVSTYSHIGFNVITSRDIRWTSVTRHQAHAHPPTMVRFVVGPKQPPETIS 132
T T + P +T+S + T+ W T PPT + P PP T +
Sbjct: 193 TATTTTHAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHVPPTTTTWSDLPPPPPTTTT 252
Query: 131 ASLGPTVWMLPILNPFTVTFTIHTLHFTTKT 39
TVW +P T T T +T + T
Sbjct: 253 T----TVW----TDPTTTTTTDYTTAYPPTT 275
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 25.0 bits (52), Expect = 2.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 34 VIVLVVKCSVCIVKVTVKGFKMG 102
V+++ CS+C + TVK + G
Sbjct: 135 VLIVAAGCSICAAQTTVKRYPTG 157
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 158 PKQPPETISASLGPTVWMLPILNPFTVT 75
P QPPET++ + + + P + P T T
Sbjct: 1471 PVQPPETLTPAGSVAITVEPSVPPATTT 1498
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.0
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = -1
Query: 191 HPPTMVRFVVGPKQPPETISASLGPTVWMLPILNPFTVTF 72
H T + V PK T + ++ PT P P TF
Sbjct: 112 HTVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTF 151
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.0
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = -1
Query: 191 HPPTMVRFVVGPKQPPETISASLGPTVWMLPILNPFTVTF 72
H T + V PK T + ++ PT P P TF
Sbjct: 112 HTVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTF 151
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.0
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = -1
Query: 191 HPPTMVRFVVGPKQPPETISASLGPTVWMLPILNPFTVTF 72
H T + V PK T + ++ PT P P TF
Sbjct: 112 HTVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTF 151
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 524 PTSGAATSRTKPANWSLSLYTSSTVRVPRIAR 429
P + + T+P +W S TS R+PR R
Sbjct: 274 PPARRRSRSTRPTSWPRSRPTSKPKRLPRRRR 305
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.4 bits (48), Expect = 6.5
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = -1
Query: 191 HPPTMVRFVVGPKQPPETISASLGPTVWMLPILNPFTVTF 72
H T + V PK T + ++ PT P P TF
Sbjct: 112 HTITRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTF 151
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 23.4 bits (48), Expect = 6.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 369 PGQDRQRD*DDCPANVGGSFASYSRNSYSRRGVQRQGPIRGLG 497
PGQ +GG A+ R+S + G RQ GLG
Sbjct: 1154 PGQQPSPGSRSYNGQMGGGGANRKRSSATNNGGGRQSSNNGLG 1196
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 23.0 bits (47), Expect = 8.7
Identities = 10/41 (24%), Positives = 18/41 (43%)
Frame = +1
Query: 298 TVTGVAQCKIMNEDELLTTACEQFLGKTVKEIKMTVLQTLE 420
++ G+A CK + + + L K + K + QT E
Sbjct: 10 SIHGIASCKRHRDPNAIQRVAREGLAKGISIKKCDIFQTCE 50
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,106
Number of Sequences: 2352
Number of extensions: 18817
Number of successful extensions: 31
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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