Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0548
(668 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0768 - 22988119-22988223,22988337-22988558,22988645-229888... 30 1.9
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 30 1.9
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 1.9
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 30 1.9
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 29 3.3
03_06_0472 - 34172741-34172755,34172858-34172896,34173218-341733... 29 3.3
03_05_0776 + 27625122-27625415,27627226-27627273,27627455-276275... 29 3.3
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 3.3
11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348... 29 4.4
05_07_0167 + 28115290-28115349,28115952-28115996,28116087-281161... 28 5.9
05_01_0501 - 4184932-4185048,4185360-4185456,4185537-4185709,418... 28 5.9
03_02_0908 - 12308192-12308431,12309481-12309693 28 5.9
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 28 5.9
12_02_0196 - 15374814-15374997,15375304-15375547,15376035-153762... 28 7.7
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 28 7.7
07_03_0734 + 21067747-21068569,21069678-21069812,21069967-210701... 28 7.7
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 28 7.7
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 28 7.7
02_03_0052 - 14456925-14457176,14457277-14457437,14457843-144579... 28 7.7
01_06_0241 - 27813076-27813622,27813695-27814125 28 7.7
>12_02_0768 -
22988119-22988223,22988337-22988558,22988645-22988810,
22989176-22989181,22989281-22989453,22989737-22989928,
22990034-22990211,22990302-22990444,22990666-22990755,
22990869-22990991,22991391-22991568,22992213-22992442,
22992557-22992616,22992731-22992798,22992908-22992953
Length = 659
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = +1
Query: 391 PASGQRCYRSGEGKEQIPERHRELRSH*AEAHGNVREEPAPHKGRH*AREISLNHYFITV 570
PA G R Y S + +P REL + A A+ ++R+E A H + +++
Sbjct: 492 PAWG-RAYIS-TARRVVPSVPRELEEYIATAYSSIRQEEAKSNAPH---SYTTIRTLLSI 546
Query: 571 TRKCISLVSPYFNIDVSQIDLRRPLQVL 654
R I+L F+ V+Q D+ L+++
Sbjct: 547 LRISIALARLRFSETVAQSDVDEALRLM 574
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 239 PSSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKH 370
PS +R E I+K+ A+D+A K + + +KF + +H
Sbjct: 731 PSEIRNPEQIQKSRQQKAMDIARMKNRSTKESKFQKFQKNNRRH 774
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 95 DLKSQLEGFNTSCLRDVDTNEKIVL 169
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Frame = +2
Query: 245 SLRKTETIEKNILPNAIDVATEKTQKSLFDGI-----EKFDSSQLKHTETQEKNPLPDKD 409
S ++ IEK LP+ D + + ++ GI +KF S+ H E ++ + L D +
Sbjct: 117 SWKEIHQIEKQALPSFFDGISLRRTPEIYLGIRNFIMKKFHSNPQMHLELKDLSELSDGE 176
Query: 410 AIEAEKEKNKFLN--GIENFDP 469
++A+ + +FL+ G+ NF P
Sbjct: 177 -MDAQLKVLEFLSHWGLINFHP 197
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 102 RVSSKASTPAVSVTSTPMKRLCFR 173
+VSS++S+P SVT+ ++ +CFR
Sbjct: 72 QVSSQSSSPVESVTTATLRPICFR 95
>03_06_0472 -
34172741-34172755,34172858-34172896,34173218-34173309,
34173633-34173708,34174273-34174668
Length = 205
Score = 29.1 bits (62), Expect = 3.3
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Frame = +2
Query: 2 LSPSSSKIY*FTM-ACSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIV---- 166
+SP+ S Y + A + + ++ A D K E S +++ T E++V
Sbjct: 79 VSPAGSSRYLLSSRAAAAEEIQEVEASAAPAVDAKVVREEQAGSDVKNTLTQEQVVVLKV 138
Query: 167 -LPSAEDVAKEKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDGI 340
L K K+H A ++GV F K T+ ++ P + + KT +S+ D I
Sbjct: 139 SLHCKACAGKVKKHLAKMEGVTSFNIDFAAKKVTVVGDVTPLGVLNSVSKTDESVCDYI 197
>03_05_0776 +
27625122-27625415,27627226-27627273,27627455-27627514,
27627633-27627802,27627901-27627973,27628096-27628161,
27628262-27628345,27628681-27628758,27629009-27629092,
27629835-27630137,27630227-27630397,27630971-27631161,
27631284-27631686,27632246-27632497,27632577-27633077,
27633181-27633278,27633400-27633499,27633722-27633867,
27633973-27634138
Length = 1095
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +2
Query: 269 EKNILPNAIDVATEKTQKSLFDGIEKFDSSQLK-----HTETQEKNPLPDKDAIEAEKEK 433
E N+ PN +++ATE +K DGI + + L+ +T +K L K + +
Sbjct: 718 EGNLDPNELNIATEGKKKDFPDGIAECGTDALRFALVSYTSQSDKINLDIKRVVGYRQWC 777
Query: 434 NKFLNGI 454
NK N I
Sbjct: 778 NKLWNAI 784
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 57 TLPP*KTSPRSPQT*RVSSKASTPAVSVTST 149
TLPP + SP SP T SSK TP+ S S+
Sbjct: 31 TLPPGRLSPVSPLTHSSSSKLPTPSSSSGSS 61
>11_01_0450 -
3487464-3487844,3487883-3488268,3488883-3489033,
3489132-3491102,3492090-3492149,3492240-3492436,
3492678-3492963
Length = 1143
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +2
Query: 170 PSAEDVAKEKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKF 349
P +D++ E ++ G E +L T T +N + I VA E ++ F
Sbjct: 458 PFMQDISDENTNSNKDTGHEGLTLLNLDATLTSNENFAQSKIFVAPEDSESEGTISENLF 517
Query: 350 DSSQLKHTETQEKNPLPDKDAI 415
+ S +K E E+N DK+ I
Sbjct: 518 EISNMKGNEENEENSPWDKENI 539
>05_07_0167 +
28115290-28115349,28115952-28115996,28116087-28116179,
28116259-28116342,28116949-28117131,28117234-28117276,
28117671-28117891,28118060-28118137,28118404-28118529,
28118616-28118825
Length = 380
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = +2
Query: 263 TIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKF 442
T E L + I +E ++K + + TQ + L + + F
Sbjct: 283 TAENTSLRSEISRLSESSEKLRLENSALMGKLKDPAASTQAETSLQKTTTASSPRVVENF 342
Query: 443 LNGIENFDPTKLKHTETCE 499
L+ I+N + T ++HTE E
Sbjct: 343 LSMIDNTNKTSVRHTEHAE 361
>05_01_0501 -
4184932-4185048,4185360-4185456,4185537-4185709,
4186225-4186305,4186959-4187072,4187177-4187497
Length = 300
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/58 (36%), Positives = 24/58 (41%)
Frame = -1
Query: 515 WGAGSSRTFPCASA*WDRSSRCRSGICSFPSPLR*HLCPEAGSSPESRCASAGSNQTS 342
W A SS P A A R R+ P P R L A SS S A++ SN S
Sbjct: 3 WAALSSPPAPAAPAAVWMGRRARTARLPSPGPRRVVLAAAASSSSPSPDANSSSNSNS 60
>03_02_0908 - 12308192-12308431,12309481-12309693
Length = 150
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +2
Query: 293 IDVATEKTQKSLFDGIE-----KFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIE 457
I V T++ K L+D + K +S + + ++++PL + ++N+F+NGI
Sbjct: 70 IRVHTKRRNKLLYDRMRDIVFVKLNSKLINKRDNKDRDPLEKEVNDAVSNDENEFINGIV 129
Query: 458 NF 463
F
Sbjct: 130 PF 131
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 28.3 bits (60), Expect = 5.9
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 25/160 (15%)
Frame = +2
Query: 128 SCLRDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVAT 307
S +R+++ EK+ +E A+EK+ L VE S + + I NI A
Sbjct: 1405 SVIRNLE--EKLAGCQSELDAREKK----LNDVEASLKSEIDRHRKININIKRKLDASAK 1458
Query: 308 EKTQ-----KSLFDGIEKFDSSQLKHTETQEKNPLPDKD--------AIEAEKEKNK--- 439
EK + +SL +E SSQ TE + + +KD +E E++ NK
Sbjct: 1459 EKEELTKEKQSLSKQLEDLKSSQKTTTENSNEQAIKEKDFRIQTLEKVLEKERDDNKKEK 1518
Query: 440 ---------FLNGIENFDPTKLKHTETCEKNPLPTKDVIE 532
F I+N + + + E+ EK+ K+VIE
Sbjct: 1519 AFRRRNEKVFTTAIQNMNQERKQVEESIEKHRQAVKEVIE 1558
>12_02_0196 -
15374814-15374997,15375304-15375547,15376035-15376237,
15377275-15377502,15377674-15377819,15378020-15378233,
15378410-15378543,15378986-15379135,15379892-15380155,
15380962-15381051
Length = 618
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 131 CLRDVDTNEKIVLPSAEDVAK---EKQHNALLQGVELFQPSSLRKTETIEKNILPNAID 298
CL D+D E I L E ++K EKQ AL G + L + +N++P +D
Sbjct: 406 CLEDIDIGEMIGLKGEEQLSKIGFEKQ--ALSMGYQACGALELWNYPSFFRNLIPQNLD 462
>08_02_1236 +
25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/100 (19%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +2
Query: 257 TETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEA-EKEK 433
T I++ + + +D A + S +EK D + + TET+EK+ + D ++ + K
Sbjct: 562 TSGIDEAAITSGVDEAAMEADAST---VEKNDDTAIDGTETKEKHEKTNDDILQGLDLSK 618
Query: 434 NKFLNGIENFDPTKLKHTE--TCEKNPLPTKDVIEQEKSA 547
+ G+ + + + E +C + +++ +Q++++
Sbjct: 619 DNVECGVNGDEVSTFQPVESISCSTVEIEREEISDQQQTS 658
>07_03_0734 +
21067747-21068569,21069678-21069812,21069967-21070100,
21070182-21070449,21070472-21070709,21070787-21070937,
21071040-21071387
Length = 698
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 263 TIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 391
++ K +LPN ++A ++ S GIE+ + + + Q KN
Sbjct: 361 SVYKGVLPNGEEIAVKRLSMSSGQGIEELKNELVLVAKLQHKN 403
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 71 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 163
K+L + DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 71 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 163
K+L + DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>02_03_0052 -
14456925-14457176,14457277-14457437,14457843-14457914,
14458105-14458221,14458310-14458322,14458917-14458946,
14459837-14460010,14460276-14460417,14460731-14460792,
14461047-14461643
Length = 539
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/67 (22%), Positives = 35/67 (52%)
Frame = -3
Query: 348 NFSIPSNKDFWVFSVATSIALGRMFFSIVSVFLNEDGWNSSTPCSKALCCFSFATSSADG 169
+F + +D W S +++ R+ ++ S+ + G ++ TP S + FS + +S+ G
Sbjct: 260 SFPVCVPEDLWDASNSSNSDRARLIPAMFSIMYGKVGISADTPSSTSDSFFSDSLNSSCG 319
Query: 168 STIFSLV 148
++ +V
Sbjct: 320 QSLIGMV 326
>01_06_0241 - 27813076-27813622,27813695-27814125
Length = 325
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +1
Query: 355 EPAEAHRDSGEEPASGQRCYRSGEGKEQIPERHRELRS-H*AEAHGNVREEPAPHK 519
EP H + ++ R +R+ ++ + HR RS H A + V + H+
Sbjct: 23 EPEANHESANQQSHHSNRSHRTASRNAEVEQPHRSNRSHHTASRNAEVEQSHCSHR 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,194,389
Number of Sequences: 37544
Number of extensions: 373468
Number of successful extensions: 1248
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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