Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0548
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    26   1.2  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.2  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   3.8  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    24   5.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.7  
AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    23   8.7  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 18/88 (20%), Positives = 40/88 (45%)
 Frame = +2

Query: 188 AKEKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLK 367
           A  K  N +   ++    S L     +E+ ++   +    E+T+KSL + +E    ++  
Sbjct: 110 AYTKDRNNVHHPIKKMAVSILSALACVERELMTTRL--RAERTEKSLKEALEGCSQTETP 167

Query: 368 HTETQEKNPLPDKDAIEAEKEKNKFLNG 451
               + +N    ++A +A++ KN   +G
Sbjct: 168 VNGKRGRNLRSTEEADDAKRAKNDAPSG 195


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 479 KHTETCEKNPLPTKDVIEQEKS 544
           K+T TCE   LP +DV+  + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 176 QTEAQSFHWCRRHGD 132
           QT +Q+ HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +2

Query: 257 TETIEKN-ILPNAIDVATEKTQKSLF--DGIEKFDSSQLKHTETQEKNPL 397
           TE   +N I+P  IDVA E+T K  +    +E    +QL  T+ + +  L
Sbjct: 29  TEAFGRNEIVPGLIDVAPEQTIKITYPQSDVEVSLGNQLTPTQVKARPKL 78


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 493 RFRVLQLSGIEVLDAVQEFVLFLLRFDS 410
           R ++  L  +E+++ +Q+F  F   FD+
Sbjct: 7   RVKMFNLKRVEIMNTLQDFEEFTKSFDA 34


>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 120 STPAVSVTSTPMKRLCFRLLKTWQKRSNTTLYYKALN 230
           S+ A  V   PM+R  F  +  W +R     YY+ +N
Sbjct: 167 SSVASMVGFIPMERSEFPRVHGWMERLKQLPYYEEIN 203


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,709
Number of Sequences: 2352
Number of extensions: 13225
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)