Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0548
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 93 2e-19
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 34 0.079
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 33 0.14
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 32 0.42
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 31 0.56
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 31 0.98
AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical ... 29 2.3
AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical... 29 3.0
Z81047-1|CAB02827.1| 490|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC006713-3|AAK68405.1| 291|Caenorhabditis elegans Hypothetical ... 29 3.9
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 5.2
U29488-3|AAA68772.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF106574-3|AAC78159.2| 427|Caenorhabditis elegans Hypothetical ... 28 5.2
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 6.9
Z68006-2|CAA91996.1| 560|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 27 9.1
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 27 9.1
S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein. 27 9.1
M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protei... 27 9.1
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 27 9.1
AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical... 27 9.1
AF016682-9|AAB66189.3| 441|Caenorhabditis elegans Hypothetical ... 27 9.1
AF016682-8|AAO38605.1| 422|Caenorhabditis elegans Hypothetical ... 27 9.1
AC006608-2|AAF39756.1| 1147|Caenorhabditis elegans Transformer :... 27 9.1
AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer :... 27 9.1
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 92.7 bits (220), Expect = 2e-19
Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Frame = +2
Query: 65 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQP 241
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA+EKQH + +E F
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59
Query: 242 SSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEA 421
+ L T EK +LP+A D+ EK L D I F S LK TET EKN LP +
Sbjct: 60 TKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAR 119
Query: 422 EKEKNKFLNGIENFDPTKLKHTET 493
EK L +FD + L H ET
Sbjct: 120 EKT----LQMAASFDKSALHHVET 139
Score = 82.2 bits (194), Expect = 3e-16
Identities = 44/99 (44%), Positives = 57/99 (57%)
Frame = +2
Query: 248 LRKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEK 427
L+K ET EKN+LP DVA EK IE FDS++L T +EK LP D I+ EK
Sbjct: 24 LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQEK 83
Query: 428 EKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKS 544
+ + + I NF LK TET EKN LP+ + +EK+
Sbjct: 84 QHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKT 122
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = +2
Query: 359 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 538
+LK ET EKN LP K+ + EK+ + ++ IE+FD TKL T EK LP+ D I+QE
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82
Query: 539 K 541
K
Sbjct: 83 K 83
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 34.3 bits (75), Expect = 0.079
Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Frame = +2
Query: 173 SAEDVAKEKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDG-IEKF 349
S E+ K+K+ + + + + + + +EK+ L + EK +K D +E+
Sbjct: 88 SREEREKQKREKMEEREKQRIERERILEEKRLEKDKLAEEKRLDKEKKEKERLDKKLEED 147
Query: 350 DSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVI 529
+ K E +EK +++ ++ ++E+NK E K + E ++ ++ I
Sbjct: 148 KKKEEKRKEAEEKKKKDEEEKMKKDEERNKRKKEEEEKKEAKRREDEEKKEAKRKEEEAI 207
Query: 530 EQEK 541
E+ K
Sbjct: 208 EERK 211
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 33.5 bits (73), Expect = 0.14
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Frame = +2
Query: 194 EKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQ-LKH 370
EK A LQ + Q S RK E +++ + T +T++ +F + D + LK
Sbjct: 285 EKNKQAKLQREKAHQESERRKLEKLKREN-----NTPTNRTKREIFQPLPLPDYDEYLKI 339
Query: 371 TETQEKNPLPD-----KDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKD 523
+ + P P ++ ++ K +F+N I N++ +TE + P P D
Sbjct: 340 KQDCDNFPTPSAFKNSREGCDSLKSYTEFINNIANYEKELNNNTEGWQPLPFPGYD 395
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 31.9 bits (69), Expect = 0.42
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Frame = +2
Query: 194 EKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQ-LKH 370
EK A LQ + Q S RK E +++ + T +T++ +F + D + LK
Sbjct: 284 EKNKQAKLQREKAHQESERRKLEKLKREN-----NTPTNRTKREIFQPLPLPDYDEYLKI 338
Query: 371 TETQEKNPLPD-----KDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLP 514
+ + P P ++ ++ K +F+N I N++ +TE + P P
Sbjct: 339 KQDCDNFPTPSAFKNSREGCDSLKSYTEFINTIANYEKELNNNTEGWQPLPFP 391
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 31.5 bits (68), Expect = 0.56
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Frame = +2
Query: 179 EDVAKEKQHNALLQGVELFQPSSLRKTETIEKNILPNA-IDVATEK---TQKSLFDGIEK 346
ED + N G + + + IE+N + N+ I+ EK +K++ IE+
Sbjct: 43 EDKDESNTENLKNTGENATACNGINRKNYIERNRIGNSEIEEKIEKQMSVEKNI--SIEQ 100
Query: 347 FDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKD 523
F K T ++N ++ E++ E+ +LN I +F + H LP+ +
Sbjct: 101 FFGENQKSTRNSDQNAKNHEEDPESDDEETAYLNLIRSFKKEESMHDLKNASGKLPSSN 159
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 30.7 bits (66), Expect = 0.98
Identities = 26/84 (30%), Positives = 37/84 (44%)
Frame = +2
Query: 284 PNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENF 463
P ID EK + + EK + + +T EKN DK+ EAEKE+ K +
Sbjct: 54 PKLIDEFEEKESEK--EAAEKEKEKEKEKEKTHEKNEA-DKEEKEAEKEEEKEEKPPKEV 110
Query: 464 DPTKLKHTETCEKNPLPTKDVIEQ 535
K K E+ TKD +E+
Sbjct: 111 TEEKEKEK---EREKTKTKDELEE 131
>AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical
protein W03F9.2a protein.
Length = 236
Score = 29.5 bits (63), Expect = 2.3
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Frame = +2
Query: 170 PSAEDVAKEKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKF 349
P + + K+ Q +E + + + I K L N + + EK QK F ++
Sbjct: 122 PGSFQLIKQTDFAKENQLIECLENAKTTEQLGISKERLENGLKMI-EKLQKIKFKAVKVH 180
Query: 350 DSSQL------KHTETQEKNPLPDKDAIEAEKEKNKFLNGIE--NFD 466
L KHTET+++ P +K A+K N L +E N+D
Sbjct: 181 LPCCLRHEMISKHTETEKEAPPQEKSVTNAQKPGNPALLSLESRNYD 227
>AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical
protein T02H6.2 protein.
Length = 665
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/80 (28%), Positives = 35/80 (43%)
Frame = +2
Query: 302 ATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLK 481
A +K ++SL K DSS++K ++T NP D I +++ + + F K
Sbjct: 540 ARKKVEESLK---RKLDSSKVKPSQTSSPNPY--TDTILSDEHLTQLARDLSKFKSNLAK 594
Query: 482 HTETCEKNPLPTKDVIEQEK 541
C LP DV EK
Sbjct: 595 ----CFGTKLPADDVTSDEK 610
>Z81047-1|CAB02827.1| 490|Caenorhabditis elegans Hypothetical
protein C41G6.1 protein.
Length = 490
Score = 28.7 bits (61), Expect = 3.9
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Frame = +2
Query: 80 PKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQPSSLRKT 259
P+V L+S+L T +R + ++ P V E Q A + + +F+ LR+
Sbjct: 325 PEVVEKLRSELLEV-TGGIRRLSLTDRARTPYLMAVLNEIQRIASILNINIFR--ELRED 381
Query: 260 ETIEKNILPNAIDVATE----KTQKSLFDGIEKFDSSQLKHTETQEKNPLP 400
I+ + VA + T + LF+ +FD + T EK +P
Sbjct: 382 TEIDGQPIAAGTVVANQLSMIHTDEELFEDHTRFDPERFIENSTLEKKLIP 432
>AC006713-3|AAK68405.1| 291|Caenorhabditis elegans Hypothetical
protein Y119D3A.2 protein.
Length = 291
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 260 ETIEKNILPNAIDVA-TEKTQKSLFDG 337
ETI N LPN ID + T K Q+ +F+G
Sbjct: 58 ETIHYNQLPNEIDTSVTYKNQEKIFEG 84
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 5.2
Identities = 31/121 (25%), Positives = 52/121 (42%)
Frame = +2
Query: 83 KVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQPSSLRKTE 262
K+ +DL+S+L +T + T EK + E +EK+ A + E + LR+T
Sbjct: 740 KIISDLRSELSTISTELVVQKATVEKTKMDFGELETREKRATADREN-EKMEEIRLRETF 798
Query: 263 TIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKF 442
E + +A++V E L EK + E + K +D EA + + K
Sbjct: 799 AKELETMGSALEV-KETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQD--EASESRFKT 855
Query: 443 L 445
L
Sbjct: 856 L 856
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 5.2
Identities = 31/121 (25%), Positives = 52/121 (42%)
Frame = +2
Query: 83 KVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQPSSLRKTE 262
K+ +DL+S+L +T + T EK + E +EK+ A + E + LR+T
Sbjct: 740 KIISDLRSELSTISTELVVQKATVEKTKMDFGELETREKRATADREN-EKMEEIRLRETF 798
Query: 263 TIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKF 442
E + +A++V E L EK + E + K +D EA + + K
Sbjct: 799 AKELETMGSALEV-KETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQD--EASESRFKT 855
Query: 443 L 445
L
Sbjct: 856 L 856
>U29488-3|AAA68772.1| 221|Caenorhabditis elegans Hypothetical
protein C56C10.4 protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -1
Query: 461 SSRCRSGICSFPSPLR*HLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQ 306
S C G C P P C AG P C S G +T R+ +G+ Q
Sbjct: 25 SGTCGLGPCFNPLPALPSPCASAGCGPGFSCGSYGCYRTK--ARVHAAGTHQ 74
>AF106574-3|AAC78159.2| 427|Caenorhabditis elegans Hypothetical
protein E02D9.1a protein.
Length = 427
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 134 LRDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEK 313
L + D NE+IVL +K + + Q V +F PS L++ + + + EK
Sbjct: 125 LENTDENEEIVLILENISSKNDESSGNSQNVRIF-PSELQRGKYVGNGMHATVRMALHEK 183
Query: 314 TQK 322
TQK
Sbjct: 184 TQK 186
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.9 bits (59), Expect = 6.9
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 7/140 (5%)
Frame = +2
Query: 53 SDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKI----VLPSAEDVAK---EKQHNA 211
++ P + LP++ + + +G N +CL +T+ + VLP V + + + +
Sbjct: 396 TEPPLVYTLPQLKSVINGIPDGANITCLAGGETDTDVLIIEVLPGGGVVIRNGTDSKDES 455
Query: 212 LLQGVELFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 391
+ PS L T+++ P + A T+ ++ IE ++ + + +
Sbjct: 456 SGSSLSKSTPSFLSPTDSLTATTPPGSTTQAASTTESAMASSIES-PTASVTVSSPKSTE 514
Query: 392 PLPDKDAIEAEKEKNKFLNG 451
PL AI + + +G
Sbjct: 515 PLGTSSAIPTAPDHSTVHDG 534
>Z68006-2|CAA91996.1| 560|Caenorhabditis elegans Hypothetical
protein K09C8.3 protein.
Length = 560
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 248 LRKTETIEKNILPNAI-DVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAE 424
L++T EK + N + D + ++L + +QLK E N + DKD + E
Sbjct: 225 LKQTVDFEKKVFGNNVADKMNLRFDRTLQLKQALLEKAQLKGVVAPEDNGVFDKDLLLTE 284
Query: 425 KEKNKFLN 448
+ N LN
Sbjct: 285 TQANFMLN 292
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 401 PEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWRRL 294
P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 76 PKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 401 PEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWRRL 294
P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 76 PKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 421 GEGKEQIPERHRELRSH*AEAHGNVREEPAPHKGRH*AREISLNHY 558
G+ + Q P+ + RS + G++ P P A EI L+HY
Sbjct: 320 GQNQPQQPQYQQHPRSQSVDPSGDMNGGPRPIHQNFSASEIELHHY 365
>S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein.
Length = 1475
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +2
Query: 218 QGVELFQPSSLRK--TETIEKNILPNAIDVATEK-------TQKSLFDGIEKFDSSQLKH 370
Q +E Q +RK + EK PN ++ +K T FDG F S++ +
Sbjct: 300 QFIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQF 359
Query: 371 TETQEKNPLPDKDAIEAEKEKNKFLNGIEN 460
Q + L + + + + + F+NG E+
Sbjct: 360 DTMQTEIVLLTPEMLLSAMQHSDFVNGFES 389
>M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protein
protein.
Length = 1475
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +2
Query: 218 QGVELFQPSSLRK--TETIEKNILPNAIDVATEK-------TQKSLFDGIEKFDSSQLKH 370
Q +E Q +RK + EK PN ++ +K T FDG F S++ +
Sbjct: 300 QFIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQF 359
Query: 371 TETQEKNPLPDKDAIEAEKEKNKFLNGIEN 460
Q + L + + + + + F+NG E+
Sbjct: 360 DTMQTEIVLLTPEMLLSAMQHSDFVNGFES 389
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 134 LRDVDTNEKIVLPSAEDVAKEK---QHNALLQGVELFQPSSLRKTETIEKNILPNAIDVA 304
L+ ++ +E+I L A+ A++ Q ++ +EL ++K T+ +P
Sbjct: 700 LQVIERDEEIQLLKAQIQAQQNAIAQQKISIRNLELENRKLMQKKPTLVAETIPQRFTED 759
Query: 305 TEKTQKSLFD 334
TEK Q LF+
Sbjct: 760 TEKVQDILFE 769
>AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical
protein F36H12.5 protein.
Length = 197
Score = 27.5 bits (58), Expect = 9.1
Identities = 30/136 (22%), Positives = 52/136 (38%)
Frame = +2
Query: 134 LRDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEK 313
+ + +N K+ P++ E + G E + S K+E E + + EK
Sbjct: 39 ISSISSNSKVAPPASPPPPPEAEKKPET-GEEPKKEKSKMKSEVKEPDAPKKDDKTSDEK 97
Query: 314 TQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTET 493
+K + FD+ + K + K L DK E + + + IEN + K
Sbjct: 98 KEKQE----DTFDAVKPKQQDADRKKELCDKKKAENKGDYKTWNKIIENSEFDKTLSEND 153
Query: 494 CEKNPLPTKDVIEQEK 541
+K KD + EK
Sbjct: 154 GKKKKKKNKDDEKDEK 169
>AF016682-9|AAB66189.3| 441|Caenorhabditis elegans Hypothetical
protein T07D3.9a protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 336 PSNKDFWVFSVATSIALGRMFFSIVSVFLNEDGWNSSTPCSKALCCF 196
P+N++F V S +GR V+V N + W T S CF
Sbjct: 248 PTNEEFQVIHNMYSELVGRSMVHDVAVLSNTEMWMHKTNLSVTEICF 294
>AF016682-8|AAO38605.1| 422|Caenorhabditis elegans Hypothetical
protein T07D3.9b protein.
Length = 422
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 336 PSNKDFWVFSVATSIALGRMFFSIVSVFLNEDGWNSSTPCSKALCCF 196
P+N++F V S +GR V+V N + W T S CF
Sbjct: 203 PTNEEFQVIHNMYSELVGRSMVHDVAVLSNTEMWMHKTNLSVTEICF 249
>AC006608-2|AAF39756.1| 1147|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform b
protein.
Length = 1147
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +2
Query: 218 QGVELFQPSSLRK--TETIEKNILPNAIDVATEK-------TQKSLFDGIEKFDSSQLKH 370
Q +E Q +RK + EK PN ++ +K T FDG F S++ +
Sbjct: 300 QFIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQF 359
Query: 371 TETQEKNPLPDKDAIEAEKEKNKFLNGIEN 460
Q + L + + + + + F+NG E+
Sbjct: 360 DTMQTEIVLLTPEMLLSAMQHSDFVNGFES 389
>AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform a
protein.
Length = 1475
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +2
Query: 218 QGVELFQPSSLRK--TETIEKNILPNAIDVATEK-------TQKSLFDGIEKFDSSQLKH 370
Q +E Q +RK + EK PN ++ +K T FDG F S++ +
Sbjct: 300 QFIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQF 359
Query: 371 TETQEKNPLPDKDAIEAEKEKNKFLNGIEN 460
Q + L + + + + + F+NG E+
Sbjct: 360 DTMQTEIVLLTPEMLLSAMQHSDFVNGFES 389
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,664,500
Number of Sequences: 27780
Number of extensions: 312665
Number of successful extensions: 1173
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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