Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0548
(668 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g22795.1 68415.m02704 expressed protein 36 0.018
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 34 0.074
At3g57780.1 68416.m06436 expressed protein 32 0.40
At2g02720.1 68415.m00214 pectate lyase family protein similar to... 31 0.69
At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containi... 30 1.2
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 30 1.6
At3g28770.1 68416.m03591 expressed protein 29 2.1
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 29 2.1
At5g64420.1 68418.m08092 DNA polymerase V family contains Pfam d... 29 2.8
At5g45520.1 68418.m05591 hypothetical protein 29 2.8
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 29 2.8
At3g48080.1 68416.m05242 lipase class 3 family protein / disease... 29 2.8
At4g15820.1 68417.m02407 wound-responsive protein-related contai... 29 3.7
At3g54290.1 68416.m06000 expressed protein contains Pfam PF03794... 29 3.7
At1g23230.1 68414.m02906 expressed protein 29 3.7
At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative si... 28 4.9
At4g26310.1 68417.m03784 elongation factor P (EF-P) family prote... 28 4.9
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 28 4.9
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 28 4.9
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 28 6.5
At1g72950.1 68414.m08437 disease resistance protein (TIR-NBS cla... 28 6.5
At1g09140.1 68414.m01018 SF2/ASF-like splicing modulator (SRP30)... 28 6.5
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f... 27 8.5
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P... 27 8.5
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 36.3 bits (80), Expect = 0.018
Identities = 36/151 (23%), Positives = 65/151 (43%)
Frame = +2
Query: 92 TDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQPSSLRKTETIE 271
T+ K ++E + D +T EKI E+ KEK+ E + SS KTE E
Sbjct: 471 TEAKEKVESSSQEKNEDKET-EKIESSFLEET-KEKEDETK----EKEESSSQEKTEEKE 524
Query: 272 KNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNG 451
N + E+T+ + IEK ++S + ++ E +++ E+ K K
Sbjct: 525 TETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEK 584
Query: 452 IENFDPTKLKHTETCEKNPLPTKDVIEQEKS 544
IE + + T+ E + ++ QE++
Sbjct: 585 IEKEESAPQEETKEKENEKIEKEESASQEET 615
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 34.3 bits (75), Expect = 0.074
Identities = 28/137 (20%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +2
Query: 137 RDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEKT 316
R+ + NE+ + + E E++ A L+ E + +++ + E+N + +
Sbjct: 744 REKEENERRIKEAREKAELEQRLKATLEQEE--KERQIKERQEREENERRAKEVLEQAEN 801
Query: 317 QKSLFDGIE-KFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFD-PTKLKHTE 490
++ L + +E K + +LK T +E+N ++AIE E+++ + + E + +LK
Sbjct: 802 ERKLKEALEQKENERRLKETREKEENKKKLREAIELEEKEKRLIEAFERAEIERRLKEDL 861
Query: 491 TCEKNPLPTKDVIEQEK 541
E+ + ++ E+E+
Sbjct: 862 EQEEMRMRLQEAKERER 878
>At3g57780.1 68416.m06436 expressed protein
Length = 670
Score = 31.9 bits (69), Expect = 0.40
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +2
Query: 251 RKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEK-NPLPDKDAIEAEK 427
R T E++ + +D T TQ L D + + + TE +E N L D E EK
Sbjct: 39 RLKATKEESNVSVVVDDTT--TQSKLSDDDDHAVNDSSEKTEKEETINGLACDDEDEEEK 96
Query: 428 EKNKFLNGIENFDPTKLKHTETCE 499
E++K L+ I + + ETCE
Sbjct: 97 EESKELDAIAHEKTDSVSSPETCE 120
>At2g02720.1 68415.m00214 pectate lyase family protein similar to
pectate lyase P59 SP:P15722 from [Lycopersicon
esculentum]
Length = 455
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 365 KHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 538
K +E P P+ + + EK+ FLNG K KNP+P K I +
Sbjct: 375 KQVTKREYTPYPEWKSWNWQSEKDYFLNGAYFVQSGKANAWSATPKNPIPRKFAIRPQ 432
>At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 786
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 35 TMACSVSDTPSLKDLPKVATDLKSQLEGF---NTSCLRDVDTNEKIVLPSAEDVAKE 196
T S+ + + DLPK+ + SQ E + S +DT E ++ P+AED +E
Sbjct: 74 TSLASLEEVTNADDLPKIDDEKNSQFETSPHPSPSPSVALDTEEGLINPTAEDTVEE 130
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 29.9 bits (64), Expect = 1.6
Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 8/167 (4%)
Frame = +2
Query: 71 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQPSSL 250
K KV T L + FN L N K + +D + HN + E Q
Sbjct: 240 KSAKKVRTLLLPSVNVFNAQPLEKSSRNAKHIRLDTDDETFDAYHN---KSAEEEQSKED 296
Query: 251 RKTETIEKNILPNAIDVATE--KTQKSLFDGIEKFDSSQLKHTETQEKNPLP--DKDAIE 418
RK + K +V E K++K D + K E ++ +P + D +
Sbjct: 297 RKRKKSSKRNKSEEEEVNNEDHKSKKKKSKSNTNVDQVETKKKEEHKEKTIPSNNDDDDD 356
Query: 419 AEKEKNKFL--NGIENFDPTKLKHTETCEKNPLP--TKDVIEQEKSA 547
AEK++ + ++ D + E + +P ++D IE++K +
Sbjct: 357 AEKKQKRATPKEELDAIDDAETSFAEIFSRENVPKGSEDGIEKKKKS 403
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +2
Query: 251 RKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKE 430
+KT+T E + +V K + + EK +S K ET++ L + + KE
Sbjct: 759 KKTKTNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKE 818
Query: 431 KNKFLNGIENFDPTKLKHTETCEKN 505
++ N + + + E EKN
Sbjct: 819 RSGEDNKEDKEESKDYQSVEAKEKN 843
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 311 KTQKSLFDGIEKFDSSQLKHTETQEKNPLPD-KDAIEAEKEKNKFLNGIENFDPTKLKHT 487
KT ++ E+ K +E EK + KDA E + NK L+ EN D K +
Sbjct: 762 KTNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSG 821
Query: 488 ETCEKNPLPTKD 523
E +++ +KD
Sbjct: 822 EDNKEDKEESKD 833
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +2
Query: 230 LFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKD 409
L +P+ +RKT T ++ V K KS DG +K D+ +E +NP D
Sbjct: 417 LLRPAYVRKTPTKFDETKKQSVAVGYLK--KSGLDGEKKLDTETAFDSEMSGRNPYDADD 474
Query: 410 AIEAEKEKNKFLNGIENFDPT 472
+I + NKF + PT
Sbjct: 475 SI-IKSITNKFEQALLPESPT 494
>At5g64420.1 68418.m08092 DNA polymerase V family contains Pfam
domain PF04931: DNA polymerase V
Length = 1306
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 371 TETQEKNPLPDKDAIEAEKEKNKFLNGIENFD 466
TE E + LPD ++ +K K + +N + N+D
Sbjct: 12 TELVENDNLPDSSIVKKKKSKTEKMNTVANYD 43
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 314 TQKSLFDGIEKFDSSQLKHTET-QEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTE 490
T K L D +E+ D + +T +E+ ++ + + ++ +N N + K KH E
Sbjct: 575 TDKKLKDLMEREDDQVQNYGQTSKEEKGNVEETGKQEDGDQGDGINEEANLEDGK-KHDE 633
Query: 491 TCEKNPLPTKDVIEQEK 541
E+ L + +V+E+EK
Sbjct: 634 GKEERSLKSDEVVEEEK 650
>At4g09950.1 68417.m01628 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 336
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = +2
Query: 194 EKQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHT 373
EK HN +L+G++ + L+++ K L A E+T+K + + I+K S +++
Sbjct: 254 EKSHNEMLEGIKEKISNQLKESLEDVKEQLAKA-QAEREETEKKM-NEIQKLSSDEIRRL 311
Query: 374 ETQEKNPLPDKDAIEAEKEKNK 439
Q +K+ E NK
Sbjct: 312 REQLNK--AEKETASLRTELNK 331
>At3g48080.1 68416.m05242 lipase class 3 family protein / disease
resistance protein-related similar to disease resistance
protein/lipase homolog EDS1 GI:4454567; contains Pfam
profile PF01764: Lipase
Length = 629
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/78 (20%), Positives = 36/78 (46%)
Frame = -1
Query: 398 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWRRLLR*GECFFLLSRFSLMKTVGIVQRL 219
+A ++PE RC + G+ Y G W R ++RF ++ + + ++
Sbjct: 144 DAYAAPEPRCVTFGAPLVGDYIFKHALGRENWSRFF-----VNFVTRFDIVPRIMLARKT 198
Query: 218 VVKRCVASLLPRLQQTEA 165
+++ ++ +L +L T A
Sbjct: 199 TIEQTLSYVLGKLDSTRA 216
>At4g15820.1 68417.m02407 wound-responsive protein-related contains
weak similarity to KED [Nicotiana tabacum]
gi|8096269|dbj|BAA95789
Length = 460
Score = 28.7 bits (61), Expect = 3.7
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 9/171 (5%)
Frame = +2
Query: 23 IY*FTMACSV---SDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKI--VLPSAEDV 187
I+ F C+V D+ + P+V++D EG N L DV+ NEKI + A +
Sbjct: 92 IFAFQTVCAVLFLGDSTKSEKTPEVSSDS----EGNNLVLLEDVEMNEKIAEIRMMAREA 147
Query: 188 AKE--KQHNALLQGVELFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDG-IEKFDSS 358
K KQ G+++ + R +EK + +A + + G EK
Sbjct: 148 HKSEGKQEEDDETGIDIEKEIEAR-LSNMEKRLNSQRKGLAGLRVEPLDESGNDEKSLMF 206
Query: 359 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPT-KLKHTETCEKNP 508
+ K+ EK P+ + K ++ ++G E + EKNP
Sbjct: 207 EKKYKFKAEKPPMGNVKGFGGSKGSDEIMSGTEKTGKNGSASESRDGEKNP 257
>At3g54290.1 68416.m06000 expressed protein contains Pfam PF03794:
Domain of Unknown function
Length = 350
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 320 KSLFDGIEKFDSSQLK---HTETQEKNPLPDKDAIEAEKEKNKFL 445
++LF +F S Q+ H E +EK+ LP +A E KEK K L
Sbjct: 252 EALFSLASRFKSLQMMCKTHFEEEEKDLLPMVEAAEMGKEKQKKL 296
>At1g23230.1 68414.m02906 expressed protein
Length = 1615
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 521 PLWGAGSSRTFPCASA*WDRSSRC-RSGICSFPSP 420
PL+G + + P S W+R+ RC R I + PSP
Sbjct: 393 PLYGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSP 427
>At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase isoform 1, Citrus
unshiu, PIR:S72648
Length = 894
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 47 SVSDTPS--LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVAK-EKQHNALL 217
S SD+PS L+D+ ++ +LK L+G + VDTN +AE A+ EK + L
Sbjct: 532 SDSDSPSDSLRDINDISLNLKLSLDGEKSGSNNGVDTNLDAEDRAAERKAEVEKAVSTLA 591
Query: 218 Q 220
Q
Sbjct: 592 Q 592
>At4g26310.1 68417.m03784 elongation factor P (EF-P) family protein
similar to SP|Q45288 Elongation factor P (EF-P)
{Corynebacterium glutamicum}; contains Pfam profile
PF01132: Elongation factor P (EF-P)
Length = 258
Score = 28.3 bits (60), Expect = 4.9
Identities = 47/143 (32%), Positives = 62/143 (43%), Gaps = 13/143 (9%)
Frame = +2
Query: 134 LRDVDTNEKIVL--PSAEDVAK----EKQHNAL-LQG--VELFQPSSLRKTETIEKNILP 286
LRDVDT K+ L S E V K EK L +G L +P++ + E + +I
Sbjct: 112 LRDVDTGNKLNLRFGSEESVEKVFVEEKSFTCLYAEGDTAYLIEPNTFEQVE-VPLDIFG 170
Query: 287 NAIDVATE--KTQKSLFDGIEKFDSSQLKH-TETQEKNPLPDKDAIEAEKEKNKFL-NGI 454
A E K Q L+DG +S KH T T + LP K A + K L NG
Sbjct: 171 KAAVYLKEEMKVQLQLYDG-RALSASIPKHITCTVVETQLPMKGLTSAPRYKRALLDNGS 229
Query: 455 ENFDPTKLKHTETCEKNPLPTKD 523
P+ L E EK + T+D
Sbjct: 230 TIQVPSYL---EAGEKIVINTED 249
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 296 DVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKN 436
DV EK D +++ D Q + ++EK +KD E EKEK+
Sbjct: 643 DVVQEKDGDQEEDVVQEKDGDQEEDGVSKEKEQEKEKDPKEKEKEKD 689
Score = 27.5 bits (58), Expect = 8.5
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
Frame = +2
Query: 56 DTPSLKDLPKVATDL-KSQLEGFNTSCLRDVDTNEKIV-LPSAEDVAKEKQHNALLQGVE 229
+ PSL + ++ +L K ++ N + D + ++ L + +D K K+ +
Sbjct: 554 ELPSLVSVVQMIENLDKKMVDQMNKIIIMISDLDRRVESLEAFKDEQKAKEEKVHIDNCV 613
Query: 230 LFQPSSLRKTETIEKNILPNAIDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKD 409
+ + + + + E N A D + EK Q+ D +++ D Q + QEK+ ++D
Sbjct: 614 ILSNTMITRNQD-EMN-QEEAGD-SREKDQEE--DVVQEKDGDQ-EEDVVQEKDGDQEED 667
Query: 410 AIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDV 526
+ EKE+ K E K K + EK+ P+K V
Sbjct: 668 GVSKEKEQEK-----EKDPKEKEKEKDPKEKDGGPSKPV 701
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 379 SGEEPASGQRCYRSGEGKEQIPERHRELRSH*AEAHGNVREEPAPHKGRH*AREISLNHY 558
S E+ A R + + K + ER + SH ++ ++R EP H RE+ Y
Sbjct: 489 SAEQKAQEIRAAAASDFKTMLREREISINSHWSKVKDSLRNEPRYRSVAHEDREVFYYEY 548
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 359 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 538
QL+ T+ + K P E +K K D K ++ E C P+P + ++E
Sbjct: 413 QLEETDVKRKRNAPGPSPKEPAMKKQK-----SEMDCDKEENAEDCFGEPVPERFIVEMR 467
Query: 539 KS 544
+S
Sbjct: 468 RS 469
>At1g72950.1 68414.m08437 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 379
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 131 CLRDVDTNEKIVLPSAEDVAKEKQHNALLQGVELFQPSSLRKTETIEKNILPNA 292
CL + + VL A+DV K +Q +AL + F P S+ T ++ +L +A
Sbjct: 269 CLSKLRLKNQKVLLVADDVNKLEQLDALAEDFNCFGPGSIVIITTQDRQLLISA 322
>At1g09140.1 68414.m01018 SF2/ASF-like splicing modulator (SRP30)
nearly identical to SF2/ASF-like splicing modulator
Srp30 [Arabidopsis thaliana] GI:4775270
Length = 268
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 255 KPRQ*KKTFSLTQ*TSPLRRPRSLYSTVSRS 347
K R S++ + PL R RSLYS+VSRS
Sbjct: 216 KSRSVSPARSISPRSRPLSRSRSLYSSVSRS 246
>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 271
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 172 RKHNLFIGVDVTETAGVEAFELTLQVCGDLG 80
+KHNL IG+D AG + + LQ C ++G
Sbjct: 50 KKHNL-IGLDAGHRAGFISVKYILQYCKEIG 79
>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At1g25886, At4g03300
Length = 1312
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 359 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 538
QL+ T+ + K P E +K I D K ++ E C P+P + ++E
Sbjct: 359 QLEETDVKRKRNAPGPSPKEPAMKKQ-----ISEMDCDKEENAEDCFGEPVPERFIVEMR 413
Query: 539 KS 544
+S
Sbjct: 414 RS 415
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,892,119
Number of Sequences: 28952
Number of extensions: 294218
Number of successful extensions: 1045
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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