Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0547
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   1.6  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   2.7  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    24   3.6  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    23   8.3  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 474 CFSFYNKLAFPRSGPTKKYYRFHDIARHEAWPR*SDDEERKCCT 605
           CFS +   A   +   KKY    D ARH  + +    E+R  CT
Sbjct: 463 CFSLFRGRALMENSVMKKYTTKSDQARH--YVQYDQGEDRWLCT 504


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 241 VVFTFTLIAIVYALMDMDPGR 303
           + FT  L+ +VYAL ++ P R
Sbjct: 507 ISFTLALVPVVYALAEIVPSR 527


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 390 LSSNLQVLKLKTLVVFLHPSVG 325
           ++  + +++L  L V LHPSVG
Sbjct: 12  IAGTVAIVQLLLLTVLLHPSVG 33


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 234 VRCCIHLYLDRHCIRPNGH 290
           V+ C+HLYL    ++ N H
Sbjct: 112 VQMCLHLYLSPDVVQANIH 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,401
Number of Sequences: 2352
Number of extensions: 12148
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)