Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0547
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051790-1|AAK93214.1|  320|Drosophila melanogaster LD30634p pro...    85   8e-17
AE014297-894|AAF54350.1|  320|Drosophila melanogaster CG8444-PA ...    85   8e-17
AY113389-1|AAM29394.1|  343|Drosophila melanogaster RE06383p pro...    29   4.1  
AE014296-2569|AAF49585.2|  343|Drosophila melanogaster CG7554-PA...    29   4.1  

>AY051790-1|AAK93214.1|  320|Drosophila melanogaster LD30634p
           protein.
          Length = 320

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = +1

Query: 193 YSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKKDN 351
           Y +DY  IFNIILWF VVF  +L+AI YA+  MDPGRDSIIYRMT+TR+KKDN
Sbjct: 268 YGSDYPVIFNIILWFMVVFGLSLLAICYAIAAMDPGRDSIIYRMTSTRIKKDN 320


>AE014297-894|AAF54350.1|  320|Drosophila melanogaster CG8444-PA
           protein.
          Length = 320

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = +1

Query: 193 YSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKKDN 351
           Y +DY  IFNIILWF VVF  +L+AI YA+  MDPGRDSIIYRMT+TR+KKDN
Sbjct: 268 YGSDYPVIFNIILWFMVVFGLSLLAICYAIAAMDPGRDSIIYRMTSTRIKKDN 320


>AY113389-1|AAM29394.1|  343|Drosophila melanogaster RE06383p
           protein.
          Length = 343

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 172 NSVDEDGYSADYAAIFNIILWFGVVFTFTLIAIVYAL 282
           +SVD+     +Y    N + W G+VFT  LI++V+ +
Sbjct: 103 SSVDQLQQQLEYDKFMNEV-WIGIVFTLILISMVFCI 138


>AE014296-2569|AAF49585.2|  343|Drosophila melanogaster CG7554-PA
           protein.
          Length = 343

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 172 NSVDEDGYSADYAAIFNIILWFGVVFTFTLIAIVYAL 282
           +SVD+     +Y    N + W G+VFT  LI++V+ +
Sbjct: 103 SSVDQLQQQLEYDKFMNEV-WIGIVFTLILISMVFCI 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,314,055
Number of Sequences: 53049
Number of extensions: 521053
Number of successful extensions: 1340
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)