Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0543
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 193 ILACRFIRCEIKLHISISVLR*QCIQYT*HNGHLSFVCYVNI----LVFGLCITLFDCRI 360
           IL C +      +  ++ +L   CI Y  +  HL F C   I    L+F LCI  F C +
Sbjct: 234 ILLCIYYFYYAFILFTVHLLLLVCIYYF-YYMHLLFCCAFIIFTMHLLFLLCIYYFYCAL 292

Query: 361 V 363
           +
Sbjct: 293 I 293


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 289 HLSFVCYVNILVFGLCITLFDCRIVN 366
           H  F      +VFGLC+T F    VN
Sbjct: 188 HYIFTYMPYNIVFGLCLTTFGLLPVN 213


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 375 VNSVNNPTIKQSNAKPKNQYVHIT 304
           + + N P+I Q N   KN  +H+T
Sbjct: 575 IKNFNIPSILQFNDGLKNLEIHVT 598


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 390 ITLHWLFKWHEYSKFF 437
           +TLHW   W   S+++
Sbjct: 197 VTLHWHGVWQRGSQYY 212


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 390 ITLHWLFKWHEYSKFF 437
           +TLHW   W   S+++
Sbjct: 197 VTLHWHGVWQRGSQYY 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,838
Number of Sequences: 336
Number of extensions: 2916
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)