Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0543
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          24   3.5  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          24   3.5  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          24   3.5  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           23   6.1  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.1  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -1

Query: 225 NFTSDESASKNSFKPKNYRLILVIKFNWTR*QIFWVETCYN 103
           ++  DE+ SK       Y +   I  NW   +  W  T YN
Sbjct: 53  SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -1

Query: 225 NFTSDESASKNSFKPKNYRLILVIKFNWTR*QIFWVETCYN 103
           ++  DE+ SK       Y +   I  NW   +  W  T YN
Sbjct: 53  SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -1

Query: 225 NFTSDESASKNSFKPKNYRLILVIKFNWTR*QIFWVETCYN 103
           ++  DE+ SK       Y +   I  NW   +  W  T YN
Sbjct: 53  SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -1

Query: 222 FTSDESASKNSFKPKNYRLILVIKFNWTR*QIFWVETCYN 103
           +  DE+ SK       Y +   I  NW   +  W  T YN
Sbjct: 54  YVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYN 93


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 361  QSDNQTK*CKAQKPI-CSHNIQTTSAHYVKCTGCIVN 254
            + D + K    Q+P    HNIQ+        +GCIVN
Sbjct: 1615 REDQRVKFILRQRPSEIRHNIQSFREILSNVSGCIVN 1651


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,485
Number of Sequences: 2352
Number of extensions: 11930
Number of successful extensions: 60
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)