Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0541
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   1.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   1.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   1.3  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.4  

>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 525 RVFYYWDY*FLIITEISA*GCVF 457
           R+++YW + FLI+  +    C+F
Sbjct: 319 RIYFYWSFGFLIVRTVCL--CLF 339


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 525 RVFYYWDY*FLIITEISA*GCVF 457
           R+++YW + FLI+  +    C+F
Sbjct: 319 RIYFYWSFGFLIVRTVCL--CLF 339


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 525 RVFYYWDY*FLII 487
           R+++YW + FLII
Sbjct: 319 RIYFYWSFGFLII 331


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 538 LFQKACFLLLGLLISHH 488
           +F K C L   LLIS H
Sbjct: 1   MFLKLCLLASALLISTH 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,135
Number of Sequences: 336
Number of extensions: 3461
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)