Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0541
         (683 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017594-1|AAH17594.1|  242|Homo sapiens APAF1 interacting prote...   282   9e-76
BC009077-1|AAH09077.1|  242|Homo sapiens APAF1 interacting prote...   281   2e-75
AF132963-1|AAD27738.1|  242|Homo sapiens CGI-29 protein protein.      278   1e-74
BC008440-1|AAH08440.1|  242|Homo sapiens APAF1 interacting prote...   277   2e-74
BC010133-1|AAH10133.1|  204|Homo sapiens Unknown (protein for MG...   214   2e-55

>BC017594-1|AAH17594.1|  242|Homo sapiens APAF1 interacting protein
           protein.
          Length = 242

 Score =  282 bits (691), Expect = 9e-76
 Identities = 133/200 (66%), Positives = 150/200 (75%), Gaps = 1/200 (0%)
 Frame = +1

Query: 85  DPEHPRKLIPELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIX 264
           D EHPR LIPELC QFYHLGWVTGTGGGIS+K GD+IYIAPSGVQKER++  D+FV  I 
Sbjct: 20  DKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVYDIN 79

Query: 265 XXXXXXXXXXXXXXXSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLYD-KVFEITHQE 441
                          SQCTPLFM AY MR AGAVIHTHS  AV  TLL+  + F+ITHQE
Sbjct: 80  EKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQE 139

Query: 442 MIKGIKDTSLGRYLRYDEKLVVPIIENTPFEKDLAGSLEEALKEYPGTSAVLVRRHGVYV 621
           MIKGIK  + G Y RYD+ LVVPIIENTP EKDL   +  A+ EYP + AVLVRRHGVYV
Sbjct: 140 MIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYV 199

Query: 622 WGDTWQQAKTMTECYDYLFE 681
           WG+TW++AKTM ECYDYLF+
Sbjct: 200 WGETWEKAKTMCECYDYLFD 219


>BC009077-1|AAH09077.1|  242|Homo sapiens APAF1 interacting protein
           protein.
          Length = 242

 Score =  281 bits (689), Expect = 2e-75
 Identities = 133/200 (66%), Positives = 150/200 (75%), Gaps = 1/200 (0%)
 Frame = +1

Query: 85  DPEHPRKLIPELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIX 264
           D EHPR LIPELC QFYHLGWVTGTGGGIS+K GD+IYIAPSGVQKER++  D+FV  I 
Sbjct: 20  DKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDIN 79

Query: 265 XXXXXXXXXXXXXXXSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLYD-KVFEITHQE 441
                          SQCTPLFM AY MR AGAVIHTHS  AV  TLL+  + F+ITHQE
Sbjct: 80  EKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQE 139

Query: 442 MIKGIKDTSLGRYLRYDEKLVVPIIENTPFEKDLAGSLEEALKEYPGTSAVLVRRHGVYV 621
           MIKGIK  + G Y RYD+ LVVPIIENTP EKDL   +  A+ EYP + AVLVRRHGVYV
Sbjct: 140 MIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYV 199

Query: 622 WGDTWQQAKTMTECYDYLFE 681
           WG+TW++AKTM ECYDYLF+
Sbjct: 200 WGETWEKAKTMCECYDYLFD 219


>AF132963-1|AAD27738.1|  242|Homo sapiens CGI-29 protein protein.
          Length = 242

 Score =  278 bits (682), Expect = 1e-74
 Identities = 132/200 (66%), Positives = 149/200 (74%), Gaps = 1/200 (0%)
 Frame = +1

Query: 85  DPEHPRKLIPELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIX 264
           D EHPR LIPELC QFYHLGWVTGTGGGIS+K GD+IYIAPSGVQKER++  D+FV  I 
Sbjct: 20  DKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDIN 79

Query: 265 XXXXXXXXXXXXXXXSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLYD-KVFEITHQE 441
                          SQCTPLFM AY MR AGAVIHTHS  AV  TLL+  + F+ITHQE
Sbjct: 80  EKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQE 139

Query: 442 MIKGIKDTSLGRYLRYDEKLVVPIIENTPFEKDLAGSLEEALKEYPGTSAVLVRRHGVYV 621
           MIKGIK  + G Y RYD+ LVVPIIENTP EK L   +  A+ EYP + AVLVRRHGVYV
Sbjct: 140 MIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKTLKDRMAHAMNEYPDSCAVLVRRHGVYV 199

Query: 622 WGDTWQQAKTMTECYDYLFE 681
           WG+TW++AKTM ECYDYLF+
Sbjct: 200 WGETWEKAKTMCECYDYLFD 219


>BC008440-1|AAH08440.1|  242|Homo sapiens APAF1 interacting protein
           protein.
          Length = 242

 Score =  277 bits (680), Expect = 2e-74
 Identities = 132/200 (66%), Positives = 149/200 (74%), Gaps = 1/200 (0%)
 Frame = +1

Query: 85  DPEHPRKLIPELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIX 264
           D E PR LIPELC QFYHLGWVTGTGGGIS+K GD+IYIAPSGVQKER++  D+FV  I 
Sbjct: 20  DKERPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDIN 79

Query: 265 XXXXXXXXXXXXXXXSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLYD-KVFEITHQE 441
                          SQCTPLFM AY MR AGAVIHTHS  AV  TLL+  + F+ITHQE
Sbjct: 80  EKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQE 139

Query: 442 MIKGIKDTSLGRYLRYDEKLVVPIIENTPFEKDLAGSLEEALKEYPGTSAVLVRRHGVYV 621
           MIKGIK  + G Y RYD+ LVVPIIENTP EKDL   +  A+ EYP + AVLVRRHGVYV
Sbjct: 140 MIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAVNEYPDSCAVLVRRHGVYV 199

Query: 622 WGDTWQQAKTMTECYDYLFE 681
           WG+TW++AKTM ECYDYLF+
Sbjct: 200 WGETWEKAKTMCECYDYLFD 219


>BC010133-1|AAH10133.1|  204|Homo sapiens Unknown (protein for
           MGC:19822) protein.
          Length = 204

 Score =  214 bits (523), Expect = 2e-55
 Identities = 104/168 (61%), Positives = 121/168 (72%), Gaps = 1/168 (0%)
 Frame = +1

Query: 181 QGDKIYIAPSGVQKERMKANDLFVQTIXXXXXXXXXXXXXXXXSQCTPLFMLAYRMRNAG 360
           + D+IYIAPSGVQKER++  D+FV  I                SQCTPLFM AY MR AG
Sbjct: 14  RSDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPSPSKKLKKSQCTPLFMNAYTMRGAG 73

Query: 361 AVIHTHSPHAVRCTLLYD-KVFEITHQEMIKGIKDTSLGRYLRYDEKLVVPIIENTPFEK 537
           AVIHTHS  AV  TLL+  + F+ITHQEMIKGIK  + G Y RYD+ LVVPIIENTP EK
Sbjct: 74  AVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPEEK 133

Query: 538 DLAGSLEEALKEYPGTSAVLVRRHGVYVWGDTWQQAKTMTECYDYLFE 681
           DL   +  A+ EYP + AVLVRRHGVYVWG+TW++AKTM ECYDYLF+
Sbjct: 134 DLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFD 181


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,347,302
Number of Sequences: 237096
Number of extensions: 1956579
Number of successful extensions: 4195
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4180
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)