Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0540
         (404 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.1  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   2.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   2.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   4.6  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 313 HLGDFFYIKVHSTIILCLV*IFISCNCIIK 224
           HL     ++V    + CL+ + I C+C++K
Sbjct: 251 HLAVLNILRVGKNFV-CLLSLIILCDCVVK 279


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
          vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 31 EALMQRCLAPNCATGG 78
          E+L+  CL  NC  GG
Sbjct: 15 ESLVSGCLITNCPRGG 30


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 98  PWSLSVCRRSRGGRHIVR 151
           P++  VC RS G +H+++
Sbjct: 134 PFTCEVCNRSFGYKHVLQ 151


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 90  QHDRGHCLSVAVPEGGATLSVSVLGH 167
           QHD G   S   P G  T ++  LG+
Sbjct: 268 QHDLGSPSSGPAPPGDFTENMGTLGY 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,644
Number of Sequences: 336
Number of extensions: 1593
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)