Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0539
         (328 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   1.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   3.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   7.6  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 212 LVHNFFYCYI*VKYHYYA 159
           L+   FYCY  +K H Y+
Sbjct: 15  LLFYLFYCYKTIKQHIYS 32


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 212 LVHNFFYCYI*VKYHYYA 159
           L+   FYCY  +K H Y+
Sbjct: 15  LLFYLFYCYKTIKQHIYS 32


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -3

Query: 245 HFSTTFTRYSLLVHNFFYCY 186
           +F    + +S+ +  F+YCY
Sbjct: 236 NFLFVLSTFSICITQFYYCY 255


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 98  IIIGRWKKCF 69
           ++ G WKKCF
Sbjct: 169 VLDGDWKKCF 178


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 208 CIIFFIVIY 182
           CI+FFI +Y
Sbjct: 17  CILFFIYLY 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,202
Number of Sequences: 336
Number of extensions: 1312
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)