Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0539
(328 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 24 0.41
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 24 0.41
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 24 0.41
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 2.2
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 3.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 5.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 5.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 5.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 5.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 5.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 5.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 5.0
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 20 8.8
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 20 8.8
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.2 bits (50), Expect = 0.41
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 155 TMHNNDILLIYNNKKNY 205
T+HNN+ YNNKK Y
Sbjct: 311 TIHNNNNYNNYNNKKLY 327
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 24.2 bits (50), Expect = 0.41
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -2
Query: 174 ISLLCIVYCKII 139
+SLLC++YC ++
Sbjct: 6 VSLLCVIYCALV 17
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 24.2 bits (50), Expect = 0.41
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -2
Query: 174 ISLLCIVYCKII 139
+SLLC++YC ++
Sbjct: 6 VSLLCVIYCALV 17
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 2.2
Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = +2
Query: 155 TMHNND-ILLIYNNKKNY 205
T+HNN+ YNNK NY
Sbjct: 89 TIHNNNNYKYNYNNKYNY 106
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.0 bits (42), Expect = 3.8
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 254 SSVHFSTTFTRYSLLVHNFF 195
S++ + + RY LL+++FF
Sbjct: 322 SAIAYVSDVFRYGLLIYDFF 341
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 155 TMHNNDILLIYNNKKNY 205
T+HNN+ YNN NY
Sbjct: 88 TIHNNNYKYNYNN-NNY 103
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 155 TMHNNDILLIYNNKKNY 205
T+HNN+ YNN NY
Sbjct: 88 TIHNNNYKYNYNN-NNY 103
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 5.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 155 TMHNNDILLIYNNKKNY 205
T+HNN+ YNN NY
Sbjct: 89 TIHNNNYKYNYNN-NNY 104
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 5.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 155 TMHNNDILLIYNNKKNY 205
T+HNN+ YNN NY
Sbjct: 89 TIHNNNYKYNYNN-NNY 104
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 5.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 155 TMHNNDILLIYNNKKNY 205
T+HNN+ YNN NY
Sbjct: 89 TIHNNNYKYNYNN-NNY 104
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 5.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 155 TMHNNDILLIYNNKKNY 205
T+HNN+ YNN NY
Sbjct: 89 TIHNNNYKYNYNN-NNY 104
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.6 bits (41), Expect = 5.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 104 HIIIIGRWKKCFFFLNKIIHLDFL 33
HI +IG + F +K IH+ FL
Sbjct: 122 HIPVIGISSRDSAFSDKNIHVSFL 145
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 19.8 bits (39), Expect = 8.8
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = -3
Query: 236 TTFTRYSLLVHNFFYC 189
+ T Y L HN YC
Sbjct: 148 SNITMYDLKSHNDIYC 163
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 19.8 bits (39), Expect = 8.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 155 TMHNNDILLIYNNKKNY 205
T+HNN+ YN K Y
Sbjct: 322 TIHNNNNYKNYNKKLYY 338
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,722
Number of Sequences: 438
Number of extensions: 1665
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7217694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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