Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0538
         (617 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q585Z6 Cluster: Putative uncharacterized protein; n=1; ...    38   0.25 
UniRef50_Q10Z10 Cluster: Pentapeptide repeat; n=1; Trichodesmium...    36   1.0  
UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092; ...    34   2.4  
UniRef50_A0D152 Cluster: Chromosome undetermined scaffold_34, wh...    33   4.1  
UniRef50_A3YD39 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  
UniRef50_Q8IHR3 Cluster: Transport protein, putative; n=2; Plasm...    33   5.5  
UniRef50_A7ATT5 Cluster: Membrane protein, putative; n=1; Babesi...    33   5.5  
UniRef50_Q4DCQ5 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  
UniRef50_Q5AG59 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  

>UniRef50_Q585Z6 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 287

 Score = 37.5 bits (83), Expect = 0.25
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +1

Query: 157 ERQRTSRGPLASLPSMTWWIEYILFNTVKLLFVKVDLIKSCS-IELHLKTNESRICAR 327
           E +R S G LAS P +  W++  L N    +++KV L K C+ ++ HL    +RI AR
Sbjct: 228 ESKRASNGYLASFPHLQQWVDPALMNAA--MYIKV-LDKRCNMLDEHLSEKRNRILAR 282


>UniRef50_Q10Z10 Cluster: Pentapeptide repeat; n=1; Trichodesmium
           erythraeum IMS101|Rep: Pentapeptide repeat -
           Trichodesmium erythraeum (strain IMS101)
          Length = 448

 Score = 35.5 bits (78), Expect = 1.0
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = -1

Query: 332 LWRAQIRDSFVFKCNSIEQLFIRSTFTNNNLTVLNRMYS 216
           LWR++I D+++ + N +    IR+   N+NLT +N  Y+
Sbjct: 127 LWRSEITDAYLIQANLLYANLIRANLRNSNLTNVNLSYA 165


>UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092;
           n=3; Homo sapiens|Rep: CDNA FLJ46861 fis, clone
           UTERU3011092 - Homo sapiens (Human)
          Length = 291

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +1

Query: 526 MYIFSYICVYVHIYIACVHL 585
           +Y + YICVY+HIYI C+H+
Sbjct: 200 IYTYVYICVYIHIYI-CIHV 218


>UniRef50_A0D152 Cluster: Chromosome undetermined scaffold_34, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_34,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 528

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 20/71 (28%), Positives = 40/71 (56%)
 Frame = +1

Query: 106 QLTMIQDFSGSGIIHIRERQRTSRGPLASLPSMTWWIEYILFNTVKLLFVKVDLIKSCSI 285
           Q+ +++D+  S I  + + QR +  P+  + S+  W+E I+ + + +      LIKSC I
Sbjct: 230 QMKLLEDYDQSQIDKLLQEQRDTI-PIQIVKSVQKWLELIIADHITIN----PLIKSCLI 284

Query: 286 ELHLKTNESRI 318
           ++H   ++S I
Sbjct: 285 QIHNIISQSEI 295


>UniRef50_A3YD39 Cluster: Putative uncharacterized protein; n=1;
           Marinomonas sp. MED121|Rep: Putative uncharacterized
           protein - Marinomonas sp. MED121
          Length = 860

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 251 NNNLTVLNRMYSIHQVIEGREASGPRDVLCRSRIWIMPEPLK 126
           NNNLT+ NR+     + E R  S  +D+L   R  ++P+ LK
Sbjct: 178 NNNLTLANRLLKSAHIDEVRLLSPDQDILLSERNIVLPDSLK 219


>UniRef50_Q8IHR3 Cluster: Transport protein, putative; n=2;
           Plasmodium|Rep: Transport protein, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 872

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 514 FDRKMYIFSYICVYVHIYIACVHLF 588
           F RKM I+ YI +Y++IYI C++ F
Sbjct: 826 FHRKM-IYIYIYIYIYIYIMCIYFF 849


>UniRef50_A7ATT5 Cluster: Membrane protein, putative; n=1; Babesia
           bovis|Rep: Membrane protein, putative - Babesia bovis
          Length = 1820

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 583 DEHTQCIYVHTHIYMKICTFFYQNCFRLRVNVSPASHQNKH 461
           DE  +C+Y+  HI +  C +F  +    ++   P  HQ++H
Sbjct: 464 DEIIRCLYICIHIILDGCLYFIDSLTSYKLFALPLDHQSEH 504


>UniRef50_Q4DCQ5 Cluster: Putative uncharacterized protein; n=1;
            Trypanosoma cruzi|Rep: Putative uncharacterized protein -
            Trypanosoma cruzi
          Length = 4702

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +1

Query: 169  TSRGPLASLPSMTWW--IEYILFNTVKLLFVKVDL 267
            T R P+A+ PS++WW   E +LF+T+K L    D+
Sbjct: 3138 TLRLPIAAFPSLSWWPSPEAVLFHTLKYLVEVCDV 3172


>UniRef50_Q5AG59 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 126

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +1

Query: 142 IIHIRERQRTSRGPLASLPSMT--WWIEYILFNTVKLLFVKVDLIKSCSIELHLKTNESR 315
           I+ +  R++T    + S P++    W+  + F  + LLF+  D    C I  H+    +R
Sbjct: 57  ILLLFRRKKTGHSSIFSSPAVVDGKWVYELCFTFILLLFLNFDFRMLCIIGYHIPPRGTR 116

Query: 316 ICARHKKIVIRV 351
           +     KIV+R+
Sbjct: 117 LTT--PKIVVRI 126


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,017,299
Number of Sequences: 1657284
Number of extensions: 11124283
Number of successful extensions: 27210
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26537
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)