Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0538
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    24   1.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    24   1.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   3.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.3  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 220 YILFNTVKLLFVKVDLIKSCSIE 288
           ++LF T+K+L  K   +K+C +E
Sbjct: 148 FLLFATLKILLGKYTQLKACLME 170


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 220 YILFNTVKLLFVKVDLIKSCSIE 288
           ++LF T+K+L  K   +K+C +E
Sbjct: 148 FLLFATLKILLGKYTQLKACLME 170


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 220 YILFNTVKLLFVKVDLIKSCSIE 288
           ++LF T+K+L  K   +K+C +E
Sbjct: 468 FLLFATLKILLGKYTQLKACLME 490



 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 305 FVFKCNSIEQLFIRSTFTNNNLTVLNRMYSIHQVIEGRE 189
           F +  N+   +F+     N   T+L   YS+ ++  G E
Sbjct: 266 FWYTVNASTNIFLCDEICNEGQTILGISYSLEKLKTGDE 304


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 305 FVFKCNSIEQLFIRSTFTNNNLTVLNRMYSIHQVIEGRE 189
           F +  N+   +F+     N   T+L   YS+ ++  G E
Sbjct: 266 FWYTVNASTNIFLCDEICNEGQTILGISYSLEKLKTGDE 304


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 520 RKMYIFSYICVYVHIYI 570
           R ++ FS+ C+   IY+
Sbjct: 8   RVLFFFSFCCILFFIYL 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,330
Number of Sequences: 336
Number of extensions: 3410
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)