Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0536
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    30   0.015
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    29   0.026
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   6.9  

>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 30.3 bits (65), Expect = 0.015
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 9   NFARYGNPTPK-RTKILPYIWNPSREPNPTALVIDSRITT 125
           NFA+ G+P PK +T  +   W P  +     L I +++TT
Sbjct: 469 NFAKNGDPNPKEKTPFINVTWKPVTQNEMNFLDIGTKLTT 508


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 0.026
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +3

Query: 9   NFARYGNPTP-KRTKILPYIWNPSREPNPTALVIDSRITTAPMWNEQSVKLW 161
           NFA+ GNP P +   ++   W P        L I +++TT    + + +  W
Sbjct: 470 NFAKNGNPNPSEENPLINVTWKPVTRNEMNFLDIGTKLTTGVDPDSERMAFW 521


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 567 DLFTKRHEYESHLL*TSSNSKCSFSRANNESNKC 668
           D F +   Y      TSS++ C+     N +NKC
Sbjct: 672 DCFYENKFYRQEAQWTSSDNPCTTCFCENGNNKC 705


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 565 RICLPNGMNTSHIYCKHRVIANAVFHALIT 654
           ++C PN  NT   +C+  V+A+ V   ++T
Sbjct: 138 QVCTPNATNTVWSHCQ-CVLADGVERGILT 166


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 565 RICLPNGMNTSHIYCKHRVIANAVFHALIT 654
           ++C PN  NT   +C+  V+A+ V   ++T
Sbjct: 138 QVCTPNATNTVWSHCQ-CVLADGVERGILT 166


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 12/57 (21%), Positives = 23/57 (40%)
 Frame = +3

Query: 27  NPTPKRTKILPYIWNPSREPNPTALVIDSRITTAPMWNEQSVKLWNETYRKYRKRNY 197
           NP      +LP  W  +  P+P A      + +  + N   V   N+  R  +++ +
Sbjct: 53  NPAFFHPGLLPLAWQANSPPSPPAPSELPALKSRKLNNNNVVSSTNQEIRGPKRKTW 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,833
Number of Sequences: 336
Number of extensions: 3086
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)