Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0535
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plu...    29   2.7  
AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   2.7  
AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   2.7  
Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p...    28   4.7  
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p...    28   4.7  
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related...    28   4.7  
Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z54327-12|CAD56557.1|  543|Caenorhabditis elegans Hypothetical p...    27   8.2  
Z54327-11|CAD56556.1|  589|Caenorhabditis elegans Hypothetical p...    27   8.2  
Z54307-8|CAD56577.1|  543|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z54307-7|CAD56576.1|  589|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z54307-5|CAD56575.1|  513|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z54307-4|CAD56574.1|  510|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z54307-3|CAD56573.1|  516|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z54307-2|CAD56572.1|  503|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z54307-1|CAA91092.2|  493|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plus
           homeodomain, axonguidance protein 1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 280 PSRITPFNPFQIPLLNTIIL 339
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 280 PSRITPFNPFQIPLLNTIIL 339
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 280 PSRITPFNPFQIPLLNTIIL 339
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical
           protein ZK1067.5 protein.
          Length = 427

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +1

Query: 406 KQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIAT-GFHGIHVIIGTLFLLIC 582
           +Q L L  LLG+       Y  +E  ++  D  Y     + T GF  +H  +GT+  ++C
Sbjct: 292 RQLLVLVFLLGYMTISACVYTILEPMWSFLDSFYFCLVSLLTVGFGDLHP-VGTVEYMLC 350

Query: 583 YI 588
            I
Sbjct: 351 SI 352


>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
           protein 104, isoforma protein.
          Length = 1584

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 286 RITPFNPFQIPLLNTIILIRSGVTVT*SHHSLIENNFS 399
           R+ PFN  +I   +  +L  +G T T + HS+ + NFS
Sbjct: 9   RVRPFNQREISNTSKCVLQVNGNTTTINGHSINKENFS 46


>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
           protein 104, isoformb protein.
          Length = 1628

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 286 RITPFNPFQIPLLNTIILIRSGVTVT*SHHSLIENNFS 399
           R+ PFN  +I   +  +L  +G T T + HS+ + NFS
Sbjct: 9   RVRPFNQREISNTSKCVLQVNGNTTTINGHSINKENFS 46


>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
           protein protein.
          Length = 1584

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 286 RITPFNPFQIPLLNTIILIRSGVTVT*SHHSLIENNFS 399
           R+ PFN  +I   +  +L  +G T T + HS+ + NFS
Sbjct: 9   RVRPFNQREISNTSKCVLQVNGNTTTINGHSINKENFS 46


>Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical
           protein T09E11.4 protein.
          Length = 671

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 375 LIDRK*LLTNKTKIIFNYFIRILFYYFTSI 464
           LID + LL NKT   F YF    F YFT++
Sbjct: 619 LIDYEPLLFNKTTNRFEYFDSRGFLYFTAV 648


>Z54327-12|CAD56557.1|  543|Caenorhabditis elegans Hypothetical
           protein F14F11.1c protein.
          Length = 543

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 463 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 612
           ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 309 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 365


>Z54327-11|CAD56556.1|  589|Caenorhabditis elegans Hypothetical
           protein F14F11.1b protein.
          Length = 589

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 463 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 612
           ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 355 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 411


>Z54307-8|CAD56577.1|  543|Caenorhabditis elegans Hypothetical
           protein F14F11.1c protein.
          Length = 543

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 463 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 612
           ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 309 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 365


>Z54307-7|CAD56576.1|  589|Caenorhabditis elegans Hypothetical
           protein F14F11.1b protein.
          Length = 589

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 463 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 612
           ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 355 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 411


>Z54307-5|CAD56575.1|  513|Caenorhabditis elegans Hypothetical
           protein F14F11.1g protein.
          Length = 513

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 463 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 612
           ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 279 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 335


>Z54307-4|CAD56574.1|  510|Caenorhabditis elegans Hypothetical
           protein F14F11.1f protein.
          Length = 510

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 463 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 612
           ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 276 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 332


>Z54307-3|CAD56573.1|  516|Caenorhabditis elegans Hypothetical
           protein F14F11.1e protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 463 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 612
           ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 282 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 338


>Z54307-2|CAD56572.1|  503|Caenorhabditis elegans Hypothetical
           protein F14F11.1d protein.
          Length = 503

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 463 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 612
           ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 269 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 325


>Z54307-1|CAA91092.2|  493|Caenorhabditis elegans Hypothetical
           protein F14F11.1a protein.
          Length = 493

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 463 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 612
           ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 259 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 315


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,968,709
Number of Sequences: 27780
Number of extensions: 168806
Number of successful extensions: 514
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)