Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0534
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 258 4e-69
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 136 2e-32
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 134 8e-32
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 117 9e-27
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 115 3e-26
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 113 2e-25
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 108 3e-24
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 2e-23
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 104 7e-23
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 9e-23
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 101 4e-22
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 101 7e-22
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 99 2e-21
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 97 1e-20
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 95 3e-20
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 92 3e-19
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 92 4e-19
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 91 7e-19
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 85 4e-17
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 62 5e-17
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 83 2e-16
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 82 3e-16
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 81 6e-16
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 79 4e-15
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 76 2e-14
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 7e-14
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 74 1e-13
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 73 2e-13
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 69 4e-12
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 69 4e-12
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 68 8e-12
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 65 5e-11
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 64 9e-11
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 63 2e-10
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 60 1e-09
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 57 1e-08
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 57 1e-08
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 56 3e-08
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 55 4e-08
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 54 1e-07
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 52 5e-07
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 51 9e-07
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 49 4e-06
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 48 5e-06
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 48 7e-06
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 47 2e-05
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 44 1e-04
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 43 2e-04
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 42 3e-04
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 42 4e-04
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 41 0.001
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 40 0.001
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 40 0.002
SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 40 0.002
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 39 0.004
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 39 0.004
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 38 0.007
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 38 0.007
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 38 0.007
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 37 0.012
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 37 0.016
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 36 0.021
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 36 0.028
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 36 0.028
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.028
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 36 0.038
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 35 0.066
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 34 0.11
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 33 0.15
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 33 0.20
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 33 0.26
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 31 0.81
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 31 0.81
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_11465| Best HMM Match : EGF (HMM E-Value=0.13) 30 1.9
SB_3199| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 3.3
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 29 4.3
SB_3591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 29 4.3
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_9653| Best HMM Match : Retrotrans_gag (HMM E-Value=0.05) 27 9.9
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_8527| Best HMM Match : zf-C2H2 (HMM E-Value=4.3e-21) 27 9.9
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 258 bits (631), Expect = 4e-69
Identities = 114/135 (84%), Positives = 127/135 (94%)
Frame = +1
Query: 232 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 411
IWDTAGQERFQSLGVAFYRGADCCVLVFDVT PN+FK+L+SWRDEFLIQASPRDP+NFPF
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 412 VILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEA 591
V+LGNK+DL+NRAVS KR Q WC SKNDIPYFETSAKEA+NVE AFQTIA+NALAQET+
Sbjct: 61 VVLGNKIDLENRAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAKNALAQETDV 120
Query: 592 ELYNEFPDQIKLNAN 636
ELYN+FPDQIKL+ +
Sbjct: 121 ELYNDFPDQIKLSGD 135
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 183 bits (446), Expect = 1e-46
Identities = 86/160 (53%), Positives = 109/160 (68%), Gaps = 1/160 (0%)
Frame = +1
Query: 73 WLKVIILG-DSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAG 249
WL+ L D GVGK+SLMN+FV KF Q TIG +FL K+V +D T+QIWDTAG
Sbjct: 210 WLEYNTLSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAG 269
Query: 250 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 429
QERF+SL FYRG+D C+LV+ V +F +L W+ EFL A RD DNFPF++LGNK
Sbjct: 270 QERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNK 329
Query: 430 VDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAF 549
VD++ RAVS + WC+ +PYFETSAK++ NV AF
Sbjct: 330 VDVEGRAVSQEEADSWCRQNGGVPYFETSAKDSTNVNDAF 369
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 136 bits (328), Expect = 2e-32
Identities = 71/168 (42%), Positives = 105/168 (62%), Gaps = 1/168 (0%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K++++GDSGVGK+SL+ +F + FSN Y +TIG DF + + VD + + +QIWDTAGQER
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
F++L A+YR A VL++DV TF L W +E S + +++GNK DL
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEE----VSEYACEGVNTILVGNKCDL 125
Query: 439 -DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQ 579
D R V +++ + K DI + ETSAK++ NVE F+T+A A+
Sbjct: 126 IDCRQVGYNTAKEFAE-KLDISFIETSAKDSTNVESVFRTMAAELKAK 172
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 134 bits (323), Expect = 8e-32
Identities = 73/184 (39%), Positives = 106/184 (57%), Gaps = 1/184 (0%)
Frame = +1
Query: 61 GKSSWLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWD 240
GK K+++LG+S VGK+SL+ +FV +F ++TIGA FLT+ V +DD V +IWD
Sbjct: 17 GKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 241 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 420
TAGQER+ SL +YRGA ++V+D+T +TF ++W E QASP N +
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASP----NIVIALS 132
Query: 421 GNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAEL 597
GNK DL R V + Q + + N + + ETSAK A+NV F I + ++ +
Sbjct: 133 GNKADLASKRMVEYEDAQSYAED-NGLLFMETSAKTAMNVNDIFLAIGKKGKKKKGKTLN 191
Query: 598 YNEF 609
EF
Sbjct: 192 LTEF 195
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 120 bits (289), Expect = 1e-27
Identities = 63/164 (38%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K++ LGD GVGK+SL +F+ F +Y+ TIG DF+TK V++DD V +QIWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD- 435
F+ L ++ R ++ ++VFD+T +F+S+ W + + +I+GNK+D
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESVGDW----VKMVRDERGEKAVIIIVGNKMDE 280
Query: 436 LDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARN 567
D R VS ++ + + + Y ETSAK NV+L F ++++
Sbjct: 281 SDRRKVSYDVAEKSAE-RLGLSYVETSAKSGYNVKLLFTKLSKD 323
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 117 bits (281), Expect = 9e-27
Identities = 58/151 (38%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K++++GDSGVGK+SL+++F +F + K+TIG +F T+ + V+ +I+ Q+WDTAGQER
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
++++ A+YRGA VLV+D+T TF+ +E W E A P +++GNK DL
Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADP----TIVVMLVGNKCDL 129
Query: 439 DN-RAVSVKRGQQWCQSKNDIPYFETSAKEA 528
+ RAV+ +++ ++ + + E SA +A
Sbjct: 130 KHLRAVASDDAKKY-GDEHGLAFIEASALDA 159
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 115 bits (277), Expect = 3e-26
Identities = 62/162 (38%), Positives = 100/162 (61%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
KV++LGD VGK+SL+ +F + +F+ Q TIG DF + +D + V +Q+WDTAG+E+
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
+++L +F+RGAD +LVFDV+ +F S+ RD +L + + +++GNK D
Sbjct: 72 YRALSRSFFRGADGALLVFDVSVKESFDSI---RDYWLHEFHKVSGSDTITILVGNKCDK 128
Query: 439 DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 564
++ VS + Q N + + ETSAK+ NV AF+ +AR
Sbjct: 129 KDKKVSEEDIQNLSSCYN-LSWLETSAKDNTNVNEAFEAMAR 169
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 113 bits (271), Expect = 2e-25
Identities = 59/165 (35%), Positives = 99/165 (60%), Gaps = 4/165 (2%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
KV+ +GDSGVGK+S +++F + ++ + ATIG DF K + V+ + + +Q+WDTAGQER
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQER 957
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
F+S+ ++R AD ++ +DVTA ++F +L+ W ++ + ++LGNK DL
Sbjct: 958 FRSITKQYFRKADGILIFYDVTAESSFTNLKKW----MVSVEEGAEEGVAKMVLGNKTDL 1013
Query: 439 ----DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIA 561
++R V G+ ++ D Y ETSAK N++ A +A
Sbjct: 1014 AEDEESRVVKTIDGKN-LANQYDALYMETSAKTGNNIQEAMYKLA 1057
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 109 bits (262), Expect = 2e-24
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 2/178 (1%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
KV+++GD GVGKTSL+ +F F + +T+G D T+ + + V +Q WDTAGQE+
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEK 72
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
F+ + ++YR AD +LVFD+T TF S+ W L+ N V++GNK DL
Sbjct: 73 FRGITQSYYRNADAVILVFDITNRGTFASIPQW----LMNVQKYTNKNILKVLVGNKTDL 128
Query: 439 D--NRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNE 606
+R V+ + + + ++ Y ETSAK NVE+ +A L + + ++ E
Sbjct: 129 KGASRKVNTRSAANLAEFE-ELLYLETSAKWDDNVEVLIAELAEQ-LRENAKNRVFEE 184
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 108 bits (260), Expect = 3e-24
Identities = 56/163 (34%), Positives = 100/163 (61%), Gaps = 2/163 (1%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV-IVDDRIVTMQIWDTAGQE 255
++I++GDS VGK+SL+ QF +F T+G DF + + + D + +QIWDTAGQE
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQE 74
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 435
RF+S+ ++YR C++++D+T ++F ++ W E + F+++G+K+D
Sbjct: 75 RFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKE---AKQCVEEAEVVFMLVGHKID 131
Query: 436 LDN-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIA 561
++ R VS + G+ + ++ N + + ETSAK N+E AF ++A
Sbjct: 132 KESKRVVSTEEGECFAEAHN-MMFIETSAKVLCNIEEAFISVA 173
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 106 bits (254), Expect = 2e-23
Identities = 62/183 (33%), Positives = 103/183 (56%), Gaps = 22/183 (12%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFV---------------------NKKFSNQYKATIGADFLTK 195
K++++GDSGVGK+ L+ +F + ++ Y +TIG DF +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 196 EVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLI 375
+ +D + + +QIWDTAGQERF+++ ++YRGA ++V+DVT +F +++ W E
Sbjct: 70 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 129
Query: 376 QASPRDPDNFPFVILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQ 552
A +N +++GNK DL + V +++ +S +P+ ETSAK A NVE AF
Sbjct: 130 YAC----ENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLG-VPFLETSAKNATNVEQAFM 184
Query: 553 TIA 561
T+A
Sbjct: 185 TMA 187
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 105 bits (252), Expect = 3e-23
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI-VDDRIVTMQIWDTAGQE 255
KV+++GD GK S + ++VN + YK TIG DF K + + + +QIW AGQE
Sbjct: 20 KVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQE 79
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 435
RF S+ +Y+GAD CV++FD+ T W+ + + P +++GNK D
Sbjct: 80 RFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVGNKSD 139
Query: 436 LDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAEL-YNEFP 612
L +R V + + C+ + + + E S KE +NV+ + + ++ + E + Y
Sbjct: 140 LPDRPVDKEIIDKLCKEHSFLCWTEMSVKEDINVKKPMEYLVKHLMEDGKEGSVPYKPVM 199
Query: 613 DQ 618
DQ
Sbjct: 200 DQ 201
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 105 bits (251), Expect = 4e-23
Identities = 50/120 (41%), Positives = 77/120 (64%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 255
LK++I+G+SGVGK+SL+ +F + F ATIG DF K + V+ + IWDTAGQE
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 435
RF++L ++YRGA +LV+D + TF LE W +E + ++ +D +++GNK+D
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKD---IVKMLVGNKID 125
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 104 bits (249), Expect = 7e-23
Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 6/168 (3%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K+++ GD+ VGK+S + + +F + +T+G DF K ++VD + +Q+WDTAGQER
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQER 503
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
F+S+ +++R AD +L++DVT +F + W + I+ S P P ++ GNK+D+
Sbjct: 504 FRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVE--AIEESCSKP--VPIMLCGNKIDI 559
Query: 439 ------DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 564
+N+ V ++ + ETS+KE N+ A +AR
Sbjct: 560 RQSAAAENKTVITAESGSRLAKEHGALFIETSSKENKNIAEACIELAR 607
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 103 bits (248), Expect = 9e-23
Identities = 62/170 (36%), Positives = 94/170 (55%), Gaps = 5/170 (2%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K+II+GDS VGKT L + KF + + TIG DF K + ++ V +Q+WDTAGQER
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQER 107
Query: 259 F-QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 435
F +S+ +YR + V ++D+T +F++L +W E+ A D P +++GNK D
Sbjct: 108 FRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGD---VPKILIGNKCD 164
Query: 436 LD-NRAVSVKRGQQWCQSKNDIPYFETSAK---EAVNVELAFQTIARNAL 573
L R VS +++ S N +P +E S K E +E F T+ L
Sbjct: 165 LGLERTVSSNIARKFADSHN-MPLWEISIKNDAELEQIEAIFLTLTHKLL 213
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 101 bits (243), Expect = 4e-22
Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQY-KATIGA-DFLTKEVIVDDRIVTMQIWDTAGQ 252
K +I+G+SGVGK+ L+N+ N F ++ +T+ D + + D++ + + I DTAGQ
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQ 411
Query: 253 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 432
ER+ S+ A++RG LVFD+T TF L W D L + + N +++GNK
Sbjct: 412 ERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWID--LARTTSGADSNIQLILVGNKK 469
Query: 433 DL-DNRAVSVKRGQQWCQSKNDIPYFETSAKE 525
D+ DNRAV+ R +++ + N PY ETSAK+
Sbjct: 470 DMEDNRAVTYSRAKEFA-AMNGFPYIETSAKD 500
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 101 bits (241), Expect = 7e-22
Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Frame = +1
Query: 118 SLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGAD 297
S FV K+ S+ TIG +F +K V V + V +QIWDTAGQERF+S+ ++YRGA
Sbjct: 113 STTTAFVVKQDSSH---TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAA 169
Query: 298 CCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLD-NRAVSVKRGQQ 474
+LV+D+++ TF SL +W + ASP N +++GNK DLD +R V+ +
Sbjct: 170 GALLVYDISSRETFNSLTNWLTDARTLASP----NIVIILVGNKKDLDADREVTFLEASR 225
Query: 475 WCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAEL 597
+ Q +N++ + ETSA NVE F +R L + EL
Sbjct: 226 FAQ-ENELMFLETSALTGENVEEGFLKCSRTILNKIESGEL 265
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 99 bits (238), Expect = 2e-21
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 3/175 (1%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
KV++LG++GVGKTSL + F+ + TIG D +K V + ++ VT+ +WDTAG ER
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW---RDEFLIQASPRDPDNFPFVILGNK 429
F+++ +YRGA C+L+F+V P + + L W DEF PD V++ NK
Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFC-------PDALK-VLVANK 124
Query: 430 VDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAE 594
+DLD + V+ + + + S F SAK + A IA+ L + E E
Sbjct: 125 IDLDEQ-VTTESVELFASSHECHLTFRISAKTGEGIGKACTQIAKALLRENKELE 178
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 99 bits (238), Expect = 2e-21
Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K+I++GD+ VGKT L+ QF F TIG DF K V VD V +QIWDTAGQER
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
F+S+ ++Y AD ++ +D+T +F+SL W D+ + + I+GNK DL
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDD----TNRYTSKDVLIAIVGNKSDL 124
Query: 439 D-NRAV 453
NR V
Sbjct: 125 STNRKV 130
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 97.1 bits (231), Expect = 1e-20
Identities = 51/158 (32%), Positives = 82/158 (51%)
Frame = +1
Query: 91 LGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSL 270
+GD G GKT+ + + + +F +Y AT+G + + +WDTAGQE+F L
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 271 GVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDNRA 450
+Y C +++FDVT+ T+K++ +W + R +N P V+ GNKVD+ +R
Sbjct: 98 RDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-----ERVCENIPIVLCGNKVDIKDRK 152
Query: 451 VSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 564
V K K ++ Y++ SAK N E F +AR
Sbjct: 153 VKAK--AITFHRKKNLQYYDLSAKSNYNFEKPFLWLAR 188
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/131 (38%), Positives = 77/131 (58%)
Frame = +1
Query: 148 FSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTA 327
FS Y TIG DF + + +D V +QIWDTAGQERF+++ +YRG ++V+DVT+
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 328 PNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDNRAVSVKRGQQWCQSKNDIPYF 507
+TF +++ W E ++ D+ +++GNK D ++ V Q + +I F
Sbjct: 62 ADTFVNVKRWLHEI-----DQNCDDVIRILVGNKDDCPSKKVVETADLQKFGEQMNIRVF 116
Query: 508 ETSAKEAVNVE 540
ETSAKE +NVE
Sbjct: 117 ETSAKENINVE 127
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 92.3 bits (219), Expect = 3e-19
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K++++G GVGK++L QF+ F + Y TI D K+ ++D+R+ + I DTAGQE
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTI-EDSYRKQCVIDERVAHLDILDTAGQEE 71
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
F ++ + R + +LVF VT ++F+ + + ++ L +D FP +I GNK DL
Sbjct: 72 FSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQIL---RVKDRTEFPMIICGNKSDL 128
Query: 439 D-NRAVSVKRGQQWCQSKNDI 498
+ R VS GQ+ + +I
Sbjct: 129 EYERTVSTAEGQELARQLREI 149
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 91.9 bits (218), Expect = 4e-19
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Frame = +1
Query: 61 GKSSWLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI-----------V 207
GK +K + LGDSGVGKTSL+ Q+ + F+ ++ TIG DF K V+
Sbjct: 102 GKEFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERST 161
Query: 208 DDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASP 387
+ + +Q+WDTAGQERF+SL AF+R A +LVFD+T +F ++ +W + A
Sbjct: 162 RGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHAYC 221
Query: 388 RDPD 399
+PD
Sbjct: 222 ENPD 225
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 412 VILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTI 558
V+LGNK DL++ V + + + YFETSA NV + + +
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEAL 518
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 91.1 bits (216), Expect = 7e-19
Identities = 37/91 (40%), Positives = 67/91 (73%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K++I+G+S VGKTS + ++ + F++ + +T+G DF K V +D+ V +QIWDTAGQER
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLE 351
++++ A+YRGA +L++D+T +F++++
Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEESFQAVQ 113
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 85.4 bits (202), Expect = 4e-17
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
KV++LG GVGK++L QFV +F +Y TI DF KE+ VD+ ++I DTAG E+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVDNNPSILEILDTAGTEQ 63
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
F S+ + + +LV+ + TF L+ R + L + +N P V++GNK D+
Sbjct: 64 FASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQIL---RVKGSENVPIVLVGNKSDI 120
Query: 439 -DNRAVSVKRGQQWCQSKND 495
D R VS + + ++ D
Sbjct: 121 YDEREVSTSNAKTFLETNKD 140
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 62.5 bits (145), Expect(2) = 5e-17
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +1
Query: 265 SLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN 444
S + +Y+ A +VFDVT +TF +++ W+++ + + P V+L NK D
Sbjct: 705 SFNIVYYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAK 764
Query: 445 RAVSVKRGQ--QWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETE 588
+ Q ++C K I +FETSAKE VNV A + + L E E
Sbjct: 765 EGLVNNSAQMDEYCADKGFIGWFETSAKEDVNVNEAAKFLVSKILQNEKE 814
Score = 42.7 bits (96), Expect(2) = 5e-17
Identities = 17/32 (53%), Positives = 27/32 (84%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 174
KV+++GD GVGKTSL+ ++V++ FS Y+AT+
Sbjct: 673 KVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 83.0 bits (196), Expect = 2e-16
Identities = 43/116 (37%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Frame = +1
Query: 220 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 399
V +QIWDTAGQERF+++ ++YR + ++ +D+T +TFK++ W ++ A P+
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYA----PE 150
Query: 400 NFPFVILGNKVDLD-NRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 564
N +++GNK DL+ R VS++ + ETSAK+A N+E AF +AR
Sbjct: 151 NAIKLLVGNKKDLEREREVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLAR 206
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 82.2 bits (194), Expect = 3e-16
Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = +1
Query: 220 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 399
+ +QIWDTAGQERF ++ A+YRGA +LV+DVT +F ++ W L + +
Sbjct: 5 IKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKW----LKKIDDHANE 60
Query: 400 NFPFVILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNAL 573
+ +++GNK D+ D R +S +G+Q S I + ETSA +NVE +F + + L
Sbjct: 61 DVKRMLVGNKCDMYDKRVISQTKGEQLASSYG-ISFIETSALSNINVEKSFVVLTEDIL 118
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 81.4 bits (192), Expect = 6e-16
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +1
Query: 199 VIVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ 378
+IV+D+ IWDTAGQERF+SL +YR A +LV+D+T +TF SL W E L +
Sbjct: 2 MIVNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRE-LQR 60
Query: 379 ASPRDPDNFPFVILGNKVD-LDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQT 555
P+D + GNK D D R V V+ Q + S + I + ETSA + NV F+
Sbjct: 61 YGPQD---IVIAVAGNKCDKADQRDVQVQDAQDFAGSVDAI-FAETSALTSKNVHWLFEE 116
Query: 556 I 558
+
Sbjct: 117 L 117
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 78.6 bits (185), Expect = 4e-15
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +1
Query: 235 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 414
W+ AGQERF+++ ++YRGA ++V+D+T ++ +L W E AS + +
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYAS----EGVHMI 428
Query: 415 ILGNKVDLD-NRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 564
++GNK+DLD +R V Q+W + +D+P+ ETSAK A NV+ AF ++R
Sbjct: 429 LVGNKIDLDTDREVQPDAAQEWA-ALHDMPFVETSAKGAKNVKEAFLVLSR 478
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 76.2 bits (179), Expect = 2e-14
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 255
+ VI++GDS GKT+L+N +V +F+ +Y+AT+ + L+ V VD + + +WDT+G E
Sbjct: 233 IPVILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLWDTSGHE 291
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKS-LESWRDEFLIQASPRDPDNFPFVILGNKV 432
+ + Y D ++ FD++ P T S LE W +I+ P N P +++G K
Sbjct: 292 DYDHVRPLSYNNVDIVLICFDISRPKTADSILEKW----IIEVCDLCP-NKPVLLVGCKQ 346
Query: 433 DLDNRA-VSVKRGQQWCQ 483
DL + + K + CQ
Sbjct: 347 DLRSEVNIVSKLASKVCQ 364
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 74.5 bits (175), Expect = 7e-14
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K++I+GD GKT L+ F +F Y T+ +++ ++ VD + V + +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 5989
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKVD 435
+ L Y D ++ F + +P++ +++ E W E + P N P +++GNK D
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCP----NVPIILVGNKKD 6044
Query: 436 L-------------DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNAL 573
L V ++ G+ + Y E SAK V F+T R AL
Sbjct: 6045 LRMDENTKRELQKMKQEPVKIEEGRAMADKISAYAYLECSAKTKDGVREVFETATRAAL 6103
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 73.7 bits (173), Expect = 1e-13
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Frame = +1
Query: 55 LHGKSSWLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 234
L K LK +I+GD GVGKTSL+ ++ F N Y T D V V+ ++ ++
Sbjct: 12 LERKKEQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT-AFDTYHVTVEVNKKLCMIEF 70
Query: 235 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDPDNFPF 411
DTAGQE F +L Y AD ++ F V +P +F ++ S W E + + P+ P
Sbjct: 71 CDTAGQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPE-IREFQPK----API 125
Query: 412 VILGNKVDL-------------DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAF 549
+++G DL D++ +SVK+ + + + Y ETS+ N++ F
Sbjct: 126 ILVGTHSDLKDCYKILTELSQQDSQPISVKKAEGLVKKTRCVCYVETSSVTQKNLKTVF 184
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 72.9 bits (171), Expect = 2e-13
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
KV++LG GVGK++L QFV +F +Y TI DF + TAG E+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDF----------------YHTAGTEQ 47
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
F S+ + + +LV+ + TF L+ R + L + +N P V++GNK D+
Sbjct: 48 FASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQIL---RVKGSENVPIVLVGNKSDI 104
Query: 439 -DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 564
D R VSV + ++ P++ETSAK NV+ F + R
Sbjct: 105 YDEREVSVGEAKDLAEAWG-CPFYETSAKTRSNVDKVFAEVVR 146
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 69.7 bits (163), Expect = 2e-12
Identities = 45/169 (26%), Positives = 89/169 (52%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 255
+K++++GD GVGK++ + F +Y T+ D + +++D + + +WDTAGQE
Sbjct: 6 VKLVVVGDGGVGKSAFLITATTNAFPGEYIPTV-FDNYSSNIMLDGKAYNVGLWDTAGQE 64
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 435
+ L Y D ++ FD+ + +F+++ES ++L + + P+ P +++GNK D
Sbjct: 65 DYDRLRPLSYPMTDVFLVCFDIGSRTSFENIES---KWLPELNHHMPET-PKILVGNKRD 120
Query: 436 LDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQE 582
L R+ +S++ I Y E +A+ L Q + ++L Q+
Sbjct: 121 L--RSAQQNTSLSNHRSRDPITYEE---GKALAKRLGMQYLENSSLTQD 164
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 69.7 bits (163), Expect = 2e-12
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 255
+K +++GD VGKT L+ + KF ++Y T+ D V++ T+ ++DTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKV 432
+ L Y D ++ F V +P++F+++ E W E + P+ PF+++G +V
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE-ITHHCPKT----PFLLVGTQV 117
Query: 433 DLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVEL-AFQTIARNALAQETEAELYNE 606
DL + ++++ SKN A E + EL A + + +AL Q+ +++E
Sbjct: 118 DLRDDQGTIEK-----LSKNKQKPIAVEAAEKLARELRAVKYVECSALTQKGLKNVFDE 171
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 68.5 bits (160), Expect = 4e-12
Identities = 39/111 (35%), Positives = 60/111 (54%)
Frame = +1
Query: 232 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 411
I DTAGQE + ++ + R + + VF V +F+ + +R++ +D + P
Sbjct: 281 ILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQI---KRVKDAEEVPM 337
Query: 412 VILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 564
V++GNK DL R VS Q+ +S N IP+ ETSAK V+ AF T+ R
Sbjct: 338 VLVGNKCDLPQRTVSTSDAQELAKSYN-IPFQETSAKTRQGVDDAFYTLVR 387
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 68.5 bits (160), Expect = 4e-12
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD-DRIVTMQIWDTAGQE 255
+V++LG GVGKTSL+ +F++ FS QY T+G D K V + D ++I DTAG
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTLSKDFNAFLEIMDTAGSY 167
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTF-KSLESWRDEFLIQASPRDPDNFPFVILGNKV 432
F ++ + AD VLV+ V + ++LE R+ I+ P V++GNK
Sbjct: 168 PFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGK-----TVPMVLVGNKT 222
Query: 433 DL 438
DL
Sbjct: 223 DL 224
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 67.7 bits (158), Expect = 8e-12
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Frame = +1
Query: 250 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 429
QER++++ A+YRGA VLV+D+ +F +L W +E AS D+ +++GNK
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHAS----DDLSIILIGNK 57
Query: 430 VDLDN-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAEL 597
DL + R + +RG+Q+ +++ + + ETSA ++ NV AF+ I + + + EL
Sbjct: 58 SDLKHLRMIENRRGKQFA-AEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNEL 113
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +1
Query: 280 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ-ASPRDPDNFPFVILGNKVDLDNRAVS 456
FY+ +LV+DVT+ +F++L+ W DE SP D ++ FV+ NKVD R V
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSRKRLVE 69
Query: 457 VKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTI 558
G+QW ++ + YFETSA+ + FQT+
Sbjct: 70 ESEGRQWAEN-HKFCYFETSAQTGDGIPEVFQTL 102
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 64.9 bits (151), Expect = 5e-11
Identities = 25/55 (45%), Positives = 42/55 (76%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDT 243
KV+++GDSGVGK++L+++F +F+ + K+TIG +F T+ + VD + + QIWDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 64.1 bits (149), Expect = 9e-11
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Frame = +1
Query: 82 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERF 261
++ G S VGKTSL+ +F+ F++ Y TI DF K V ++ +QI DT+G F
Sbjct: 31 IVFFGASSVGKTSLILRFLGYAFNDDYSPTI-EDFFIKHVFFNNETYELQIIDTSGTYEF 89
Query: 262 QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL- 438
++ D VLV+ P +F L +R E L R P +++ NK DL
Sbjct: 90 PAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNR----HPCIVVCNKNDLP 145
Query: 439 ---------DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAF 549
D+R + + Q Q++ + + SAKE VE F
Sbjct: 146 LATHLGVLTDHRGLRIS-AQHLVQTEWQSLWIDCSAKENSQVEDIF 190
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ-E 255
++ +LGD GVGKT+L+ +F+ +F +Y TI D K + +DD VT++I DTA + +
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTI-EDKYRKSINIDDVTVTLEILDTASRGQ 65
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDN 402
L F R D ++V+ +TF +L +RD + P N
Sbjct: 66 NSCKLRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKLSRDTNLPSN 114
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 61.7 bits (143), Expect = 5e-10
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 4/192 (2%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNK----KFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 246
KV+++GD+GVGK+ ++++ + + S YK T G + + DT+
Sbjct: 15 KVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGH---ASYFTASNSCHLYLLDTS 71
Query: 247 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN 426
G E ++ L + + DC V F + P++ SLE W ++FL D +LG
Sbjct: 72 GLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFL-DVFLGDSSRVLKFVLGC 130
Query: 427 KVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNE 606
K+D + A + + + S+ TSA NV F+ IA + E++ +
Sbjct: 131 KIDTQHEADIQPKAEDFA-SRIGAELSITSAITGTNVNDFFERIADKLKQHVSSTEVWVD 189
Query: 607 FPDQIKLNANDN 642
D N +
Sbjct: 190 KTDNFVAEPNSS 201
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +1
Query: 292 ADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN-RAVSVKRG 468
A+ +LV+D+T TF ++ W A+ ++ +ILGNK D+D+ R VS +RG
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHAN----EDVEKMILGNKCDMDDRRIVSRERG 180
Query: 469 QQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQE 582
+Q + ++ I + ETSAK +N+E AFQ +A++ L +E
Sbjct: 181 EQIAR-EHGIRFLETSAKTNINIEQAFQYLAQDILKKE 217
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 174
K++++GDSGVGKT ++ +F + F+ + +TI
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 246
K++++GDSGVGK++L++++ +F KATIG + + V ++ + V QIWDTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 304 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRAVSVKRGQQWC 480
+LV+D+T ++FK + W ASP N V+LGNK+D D R + +RG+
Sbjct: 6 LLVYDITTEDSFKHISQWLQNIEDNASP----NVCKVLLGNKLDAEDERVIDAQRGRS-V 60
Query: 481 QSKNDIPYFETSAKEAVNVELAFQTIARNALAQ 579
N++ ++E SA+ NV+ AF +AR Q
Sbjct: 61 GEDNNLEFYEASARTGENVQQAFMAVARKIKEQ 93
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 255
LKV++ GD+ VGKTS + + A + + V + + +WDT G
Sbjct: 7 LKVVLTGDNNVGKTSFLINLTQNELEGTPTAFANYELGLE---VGSQKFLLDLWDTEGTT 63
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 435
+ L Y+G+D +L FD++ TF+ +ES ++L + + P + V++GNK D
Sbjct: 64 EYDRLRPLTYQGSDIILLCFDISNRQTFERIES---KWLPETTQVLPGSIR-VLIGNKND 119
Query: 436 L-DNRAVSVKRGQQWCQSKNDIPY 504
+ R +RG+ S N + Y
Sbjct: 120 IRKTRQDKDRRGKVLKMSSNSVIY 143
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 56.8 bits (131), Expect = 1e-08
Identities = 36/123 (29%), Positives = 62/123 (50%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 255
+++ ++G GKT+ +N + +FS T+G F ++V + VT+++WD GQ
Sbjct: 21 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGN--VTIKVWDIGGQP 76
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 435
RF+S+ + RG +C V + D LE+ ++E P ++LGNK D
Sbjct: 77 RFRSMWERYCRGVNCIVYMVDAA---DHDKLEASKNELHNLLEKPQLAGIPILVLGNKKD 133
Query: 436 LDN 444
L N
Sbjct: 134 LPN 136
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNK--KFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 252
KV++ GDS VGK++L+ F + + Y T+GA+ L K V + + T +W+
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIPE--TTDSVWEHP-- 62
Query: 253 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 432
+ ++ +DV+ +F + W + ++ + +N P ++ K
Sbjct: 63 --------------NLVIVAYDVSNEQSFNACNKWLER--CRSLAKSDNNLPGALIATKT 106
Query: 433 DL-DNRAVSVKRGQQWCQSKNDIPYFETSA 519
DL R +S K+G+ + SKN + YFE SA
Sbjct: 107 DLKQRRVISTKQGKDYANSKN-LEYFECSA 135
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 55.6 bits (128), Expect = 3e-08
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 255
+KV+ +GD VGKTS + F + A+I D +K + +D + T+ + DT G
Sbjct: 10 IKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCDTPGTM 68
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDPDNFPFVILGNKV 432
+ +++ A +L FD+ +F ++ES W ++ S + P V++GNK+
Sbjct: 69 HPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLETS-----DVPKVLVGNKM 123
Query: 433 DLD-NRAVSVKRGQ----------QWCQSKNDIPYFETSAKEAVNVELAFQT 555
+L ++ S GQ + K++IPY E SAKE +E T
Sbjct: 124 ELRCSQQESTDLGQTHDCVPFTEAKALACKSNIPYVENSAKELKGLEDVLMT 175
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 55.2 bits (127), Expect = 4e-08
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K+ ILG GVGKTSL+ F KFS ++ T+ D+ V +D + I DTAG
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTYA 72
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDE-FLIQA-SPRDPDNFPFVILGNKV 432
F + ++VF + + ++F+ DE + I+ + + ++ NK+
Sbjct: 73 FPVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEIYSIKVKAGSEAKKIILNLVANKL 132
Query: 433 DLD--NRAVSVKRGQQWCQSKNDI--PYFETSAKEAVNVELAFQTIARNALAQETEAE 594
D+D R ++ R ++ + Y E S+ VE F +I + + E E
Sbjct: 133 DIDCRERVITAARAHAELSKRSWLTGEYMEISSMLNFRVERTFHSIVKLIVEDFEEKE 190
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD-----FLTKEVIVDDRIVTMQIWD 240
+++ ++GDSGVGKTSL++ +++ + TIG + KE + + ++ WD
Sbjct: 7 VRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWD 66
Query: 241 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFL 372
G ++ FY G + +LV D+T +F +L W E L
Sbjct: 67 IGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEVL 110
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +1
Query: 250 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 429
QER++++ A+YRGA VLV+D+ +F +L W +E AS D+ +++GNK
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHAS----DDLSIILIGNK 57
Query: 430 VDLDN-RAVSVKRGQQWC 480
DL + R + +RG C
Sbjct: 58 SDLKHLRMIENRRGSNSC 75
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 52.0 bits (119), Expect = 4e-07
Identities = 38/162 (23%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Frame = +1
Query: 82 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERF 261
+++LG +GVGK++L+ +F +F ++Y T+ + +D+ T+ I DTA +
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTY-DVSATIDEDPATLHITDTA--STY 186
Query: 262 QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLD 441
+ + ++ G ++V+ + TF++ + + + + + V+ GNK DL
Sbjct: 187 EPVYLSQNEG---FIVVYSINELRTFETAKQ-LVKLIREIKKQKALTTLIVLAGNKCDLK 242
Query: 442 N-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 564
+ RAVS + +++ ++++ + ETSA +N ++ F R
Sbjct: 243 HCRAVSRQEAREFA-AEHECVFHETSAANNINTKVIFHDCVR 283
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Frame = +1
Query: 238 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVI 417
DTAG+E++ L + RGA ++ +D+T ++ K L R L+QA+ +P N VI
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLND-RHLHLLQAA--EP-NCLVVI 333
Query: 418 LGNKVDL---DNRAVSVKRGQQWCQSKNDI-----------PYFETSAKEAVNVELAFQT 555
+G K DL D R ++ G + + +N++ P+FETS+K V+ F+
Sbjct: 334 VGCKKDLVTDDTREITEAAGMELAKVQNELKSRSLLSLKRTPFFETSSKTGDGVDNVFEF 393
Query: 556 IARNAL 573
I L
Sbjct: 394 ILSTCL 399
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 50.8 bits (116), Expect = 9e-07
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = +1
Query: 280 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLD-NRAVS 456
+ R + ++++ +T ++F ++D+ R D+ P V++GNK DL+ R V+
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQI---ERVRRTDDIPIVLVGNKDDLEGKREVT 61
Query: 457 VKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEFPDQIK 624
+ GQ+ + D P+FETSA + V+ AF + R +E + L F ++ K
Sbjct: 62 TQEGQELAH-RFDCPFFETSACQRHFVDDAFHGLVREIRKKEKQ-RLTGHFQEEKK 115
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/88 (28%), Positives = 53/88 (60%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 255
+KV+I+G+ GVGK++L +F+ K+F +Y T+ + + ++ V +V +++ DTAG+
Sbjct: 862 VKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY-RQDAEVAGEVVAIELTDTAGEN 920
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTF 339
L G + V+++ +T+ ++F
Sbjct: 921 SPAKLERCLEIG-EVFVVLYSITSRHSF 947
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 48.4 bits (110), Expect = 5e-06
Identities = 35/121 (28%), Positives = 55/121 (45%)
Frame = +1
Query: 82 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERF 261
V++LG GKTS++ + KF +Y T+ E I + + ++WD G+E+
Sbjct: 24 VVMLGLDKSGKTSILYR---NKF-REYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQN 79
Query: 262 QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLD 441
+ L A+ R D + V D T+ LE RDE + + P +I NK D
Sbjct: 80 RPLWKAYARQTDAVIYVVDSTSAG---KLEEARDELFNLLNSAQLNGAPILIFANKQDCP 136
Query: 442 N 444
N
Sbjct: 137 N 137
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 48.0 bits (109), Expect = 7e-06
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI-VDDRIVTMQIWDTAGQ 252
LK+ I+GD VGKT+L F +Y T D ++ VD ++D+AG
Sbjct: 7 LKLYIVGDGAVGKTALFITAATNTFPTEYIPT-AYDASEQDFFNVDGIKYQAVLFDSAGG 65
Query: 253 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLE-SWRDEFLIQASPRDPDNFPFVILGNK 429
E F L Y D ++ FD+ +F+++ W E L SP P V++GNK
Sbjct: 66 EDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPE-LDHFSP----GVPRVLVGNK 120
Query: 430 VDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAEL 597
DL K+ Q+ S + + Y E KEA Q I +AL E E+
Sbjct: 121 KDL-----RPKQDQEDSHSIDFVSYEE--GKEAAQ-NFKMQYIENSALLNENVKEV 168
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
K+ ++G VGK+SL QFV +F + Y TI F TK + + +++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKNIKYKGQEFFLELVDTAGQDE 66
Query: 259 FQSLGVAFYRGADCCVLVFDVTA 327
+ ++ G +LV+ VT+
Sbjct: 67 YSIFPQSYSMGIHGYILVYAVTS 89
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD-FLTKEVIVDDRIVTMQIWDTAGQE 255
K+ + G GVGKTS+ + +F + ++ D V + ++ + + +WDT G E
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGME 69
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 435
++SL Y + ++V+ + P++ ++ + A V++ NK+D
Sbjct: 70 EYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAA-----KIVLVANKMD 124
Query: 436 LDN 444
L N
Sbjct: 125 LPN 127
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 46.4 bits (105), Expect = 2e-05
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKK--FSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAG 249
++++ILGDS VGKT L+ Q K S ++ +I +++ +IVD ++ +++ D
Sbjct: 19 IRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVA-NIIVDGKVYKLELCDVDN 77
Query: 250 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDPDNFPFVILGN 426
+ S + D L F V ++F+ +E+ W E + SP N P +++G
Sbjct: 78 LDTKISKP---FSDTDVFCLCFSVGDMDSFRHVENKWYAE-VKNCSP----NSPIIVVGT 129
Query: 427 KVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKE 525
K DL + KRG++ +D P S KE
Sbjct: 130 KTDLRENE-NKKRGKK----DDDSPTAIVSVKE 157
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/123 (26%), Positives = 63/123 (51%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 255
+++++LG GKT+++ + K+ + TIG + E + + VT+ IWD GQ+
Sbjct: 20 VRIVMLGLDAAGKTTILYKLKLKETVSTIP-TIGFNV---ETLQPTKNVTLTIWDVGGQD 75
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 435
+ + L +++G + L+F V + + + E+ + + S D P V++ NK D
Sbjct: 76 KIRPLWRHYFQGTE--GLLFVVDSSDVLRMPEAKEELHGVLDSDEFRD-VPVVVVANKQD 132
Query: 436 LDN 444
L N
Sbjct: 133 LPN 135
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/62 (32%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI-VDDRIVTMQIWDTAGQ 252
++V++LG GVGK++L +F+ ++F +Y T+ + + ++ +D+ V++ I DTAG+
Sbjct: 17 VRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTL--ESTHRHILQIDNEDVSLDISDTAGE 74
Query: 253 ER 258
R
Sbjct: 75 VR 76
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/69 (28%), Positives = 42/69 (60%)
Frame = +1
Query: 64 KSSWLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDT 243
++S ++ + G +GVGKTS++ +F KFS +Y+ T+ D +K + + I+ + D+
Sbjct: 5 RNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTV-EDCYSKVLNKNGSIMVLNTTDS 63
Query: 244 AGQERFQSL 270
+G +F ++
Sbjct: 64 SGSYQFPAM 72
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Frame = +1
Query: 214 RIVTMQIWDTAGQERF-----QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ 378
+ V + I DT G+ R +S YR V+VFDVT +F+ + +W D +
Sbjct: 15 KTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERVPTWLD----K 70
Query: 379 ASPRDPDNFPFVILGNKVD--LDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQ 552
P V++GNK D L++ + ++ + N Y ETSA N++ F
Sbjct: 71 VQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAKYA-TNNGFLYIETSALGMCNIDEIF- 128
Query: 553 TIARNALAQETE 588
I L Q+ E
Sbjct: 129 AILLELLMQQAE 140
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 412 VILGNKVDLD-NRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETE 588
V++GNK LD R VSV G+ + +P+FETSA++ +NV F+ + + L + +
Sbjct: 12 VLVGNKCHLDCEREVSVAEGRGLAKELG-LPFFETSAEKNINVTDCFEALVDSILEEIKQ 70
Query: 589 AELY 600
E++
Sbjct: 71 KEIF 74
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Frame = +1
Query: 79 KVIILGD-SGVGKTS--LMNQFVNKKFSNQYKATIGADFLTKEVI------VDDRIVTMQ 231
K++ +GD +G GK L + N+ S K TIG DF + D V +Q
Sbjct: 52 KIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRETDKKKDSTVKLQ 111
Query: 232 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDE 366
WD A ERF + + R ++ + +P+ S W ++
Sbjct: 112 FWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSALKWSEK 156
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/151 (21%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 258
++ ++G GVGK+S+ +++ +F+ E+ ++ +++ DTAGQE
Sbjct: 2600 RLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTAGQEE 2645
Query: 259 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD-NFPFVILGNKVD 435
+ S + D +++F + + +++ L+ R + + + + P VI+GNK+
Sbjct: 2646 YTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTTCTIPMVIVGNKMT 2705
Query: 436 LDNRAVSVKRGQQWCQSKNDIPYFETSAKEA 528
N S + Q Q N T K A
Sbjct: 2706 GLNVRESFQLMMQQIQKINPALLERTIPKNA 2736
>SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +1
Query: 295 DCCVLVFDVTAPNTFKSLESWRDEFLIQASPR-DPDNFPFVILGNKVDLDNRAVSVKRGQ 471
D ++++DV A N K LE +++ L PFVI+ +K D D + ++
Sbjct: 156 DGFLVLYDVEATNA-KRLEDTQEKVLSAVITYVQKSKRPFVIVASKCD-DTQLSLLQEVY 213
Query: 472 QWCQSKN-DIPYFETSAKEAVNVELAFQTIAR 564
++ Q+K ++P ETS + VNV+LAF +A+
Sbjct: 214 RFAQTKKLNVPIVETSTYQNVNVDLAFVVLAQ 245
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 280 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ-ASPRDPDNFPFVILGNK 429
FY+ +LV+DVT+ +F++L+ W DE SP D ++ FV+ NK
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANK 55
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +1
Query: 82 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 177
+++LG +GVGKT+L+ +FV +F N+Y T+G
Sbjct: 327 MVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 38.7 bits (86), Expect = 0.004
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFL--TKEVIVD----DRI-VTMQI 234
LK+ ++GD+ VGKT ++ ++ + S Q T+ + +E DR+ +
Sbjct: 9 LKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVTY 68
Query: 235 WDTAGQERFQSLGVA-----FYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDP 396
WDT R + L ++ YR D ++ FD+T P +F+++ + W E L P
Sbjct: 69 WDTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPE-LKHYMPET- 126
Query: 397 DNFPFVILGNKVDL 438
P +++GNK D+
Sbjct: 127 ---PVLVVGNKKDM 137
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 177
KV+I+GD+ VGKTS + ++V+ +YK TIG
Sbjct: 24 KVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 67 SSWLKVIILGDSGVGKTSLMNQFVNKKFSNQ--YKATIGADFLTKEVIVDDRIVTMQIWD 240
S +K+++LG+SG GKTS + V + NQ T+G +V D + +Q+ D
Sbjct: 258 SKRIKLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDG--LEVQVVD 315
Query: 241 TAGQERFQ 264
AGQ R+Q
Sbjct: 316 CAGQRRYQ 323
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 400 NFPFVILGNKVDLDN-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTI 558
N +++GNK D++ R VS RG+Q + ++ETSAK+ NV+ F+ +
Sbjct: 12 NAQVILVGNKCDMEEERVVSYDRGKQLADQLG-LEFYETSAKDNTNVKKVFERL 64
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 177
L+V++LG GVGK++L + + K+F +Y +T+G
Sbjct: 17 LRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 37.1 bits (82), Expect = 0.012
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Frame = +1
Query: 193 KEVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFL 372
KE+ + D + + I DTAG ++ D V+V+ +T + S E R
Sbjct: 6 KELRIGDSSMELDILDTAGNGE-----ASYIHNGDGFVVVYSIT---DYYSYEMARQLVK 57
Query: 373 IQASPRDPDNF---PFVILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVEL 543
+ R D+ P V++GNK DL K + S+ ++ETSA NV +
Sbjct: 58 LVTQVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEAREFASEYGCSHYETSALTNRNVHV 117
Query: 544 AFQTIA 561
F +A
Sbjct: 118 IFYNMA 123
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRI 219
L + +LG+ VGK+SL+ F + F +Y TI +F++K ++ +D++
Sbjct: 28 LTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI-EEFVSKHLLYNDQL 74
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 36.7 bits (81), Expect = 0.016
Identities = 29/122 (23%), Positives = 53/122 (43%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 255
+K++I GD GKT + ++ K F+ QY T E+ DD G
Sbjct: 226 MKIVIKGDRNTGKTCMFHRLHGKPFNEQY-------IPTNEIQEDD----------DGNA 268
Query: 256 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 435
+ V Y+G +++ D+T P W ++ + P+ P + P ++L N+ D
Sbjct: 269 VLDAGFVDVYKGTHGVLMLLDITKP--------WTFTYVRRELPKVPPHIPVLVLANRRD 320
Query: 436 LD 441
++
Sbjct: 321 ME 322
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 36.3 bits (80), Expect = 0.021
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +1
Query: 100 SGVG-KTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGV 276
SG G KT+++ + K+ N T+ E I + +T +WD GQ++ + L
Sbjct: 117 SGRGRKTTILYKLKLKETVN----TVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWR 172
Query: 277 AFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 438
+++GA+ + V D + R+E + + P V++ NK DL
Sbjct: 173 HYFQGAEGIIFVVDSADKERIFEV---REELTRVLQHSELNGVPVVVVANKQDL 223
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 280 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN-RAVS 456
+YRGA +LV+D+ T++++E W E A N +++GNK DL + RAV
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDLRHLRAVP 57
Query: 457 VKRGQQWCQ 483
+ + +
Sbjct: 58 TDEAKAFAE 66
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 58 HGKSSWLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 207
H K KV+ G GVGKTSL + ++KF + + D KEV+V
Sbjct: 22 HTKVPLYKVVFAGFRGVGKTSLFLRIRDEKFYGKESRDMTPDICVKEVVV 71
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 79 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 174
K+ ILG S VGKTSLM K F+N++ TI
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTI 220
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 35.9 bits (79), Expect = 0.028
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFV--NKKFSNQYKATIGAD-FLTKEVIVDDRIVTMQIWDTA 246
+K++++G GKT+LM++ + N F N I + F K+ + + +IWD
Sbjct: 552 MKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFI-FKIWDFG 610
Query: 247 GQERFQSLGVAFYRGADCCVLVFDV-TAPNTFKSLESWRDEFLIQASPRDPDNFPFVILG 423
GQE + + F +LV+++ LE W D S R P + VI+G
Sbjct: 611 GQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTI----SARAPGS-SLVIVG 665
Query: 424 NKVD 435
+D
Sbjct: 666 THLD 669
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 412 VILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAF 549
V++GNK DL D R V +GQ + + + ETSAK +NV F
Sbjct: 2 VLVGNKCDLEDERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIF 48
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 34.7 bits (76), Expect = 0.066
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +1
Query: 304 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRAVSVKRGQQ 474
+LV+D+T +F+ ++W AS +D + ++LGNK D+ D R VS +RG+Q
Sbjct: 89 MLVYDITNDKSFEKHQNWIRNIEEHAS-QDVEK---MVLGNKCDMEDRRQVSKERGEQ 142
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA-GQ 252
+K++ +G G GKT+L+NQ + K S + I D+ ++ R + + ++D + G
Sbjct: 1113 MKLVTVGMGGRGKTTLLNQLLKSKASAPHNELIIRDW----CLMSSRTLYLAVYDVSKGV 1168
Query: 253 ERFQSL 270
+ F+SL
Sbjct: 1169 QEFESL 1174
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/59 (25%), Positives = 33/59 (55%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 252
L V +LG GVGK++ + + ++F +Y + ++ + +D + + + + DTAG+
Sbjct: 182 LSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNY-KHSMEIDGQYLALDVLDTAGK 239
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/119 (21%), Positives = 60/119 (50%)
Frame = +1
Query: 88 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQS 267
++G GKT+++ + ++ + T+G + T V + ++ +WD GQ++ ++
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVP-TLGFNVET----VTYKNISFTVWDIGGQDKIRA 55
Query: 268 LGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN 444
L +Y+G C ++F V + + ++ E+ R+E + + +++ NK D+ N
Sbjct: 56 LWRVYYQG--CQGIIFVVDSADRERAEEA-RNELHKLLAEEELQQVILLVIANKQDMAN 111
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGA 180
LKV+++GDS VGKT L+ F+ ++ Q T G+
Sbjct: 13 LKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAGS 47
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.1 bits (72), Expect = 0.20
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 220 VTMQIWDTAGQERFQSLGVAFYR 288
+ + +WDTAGQE F ++ A+YR
Sbjct: 34 IRLMLWDTAGQEEFDAITKAYYR 56
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 58 HGKSSWLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 237
H S K+ ++GD+ GKTSL+N V K + + T+ + +V D + +W
Sbjct: 56 HATSERYKLSVVGDAESGKTSLLNALV--KSDIEVEETVIFEECVTDVTSGDSNLEFMLW 113
Query: 238 DTA 246
D++
Sbjct: 114 DSS 116
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 32.7 bits (71), Expect = 0.26
Identities = 27/130 (20%), Positives = 59/130 (45%)
Frame = +1
Query: 55 LHGKSSWLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 234
L GK ++++++G GKT+++ + + TIG + T V+ + ++ +
Sbjct: 12 LFGKKE-MRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVET----VEYKNISFTV 65
Query: 235 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 414
WD GQ++ + L +++ + V D N + + R+E + + + +
Sbjct: 66 WDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERVGEAREELNRMLNEDELRDAVLL 122
Query: 415 ILGNKVDLDN 444
+ NK DL N
Sbjct: 123 VFANKQDLPN 132
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 490 NDIPYFETSAKEAVNVELAFQTIAR 564
+++ + ETSAK +NV+LAF IAR
Sbjct: 150 HNVAFMETSAKTGLNVDLAFMAIAR 174
>SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 43 CAKCLHGKSSWLKVIILGDSGVGKTSLMNQFVNKK 147
CA + + LKV I+G+ GK++L+NQ V +K
Sbjct: 29 CASTVAPDTKLLKVAIIGEPNSGKSTLINQLVGEK 63
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.5 bits (68), Expect = 0.61
Identities = 28/135 (20%), Positives = 63/135 (46%)
Frame = +1
Query: 55 LHGKSSWLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 234
L GK ++++++G GKT+++ + + TIG + + V+ + ++ +
Sbjct: 12 LFGKKQ-MRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVES----VEYKNISFTV 65
Query: 235 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 414
WD GQ++ + L +++ + V D N + + ++E + + +
Sbjct: 66 WDVGGQDKIRPLWRHYFQNTQGLIYVVD---SNDRERVNESKEELNKMLQEDELKDAVVL 122
Query: 415 ILGNKVDLDNRAVSV 459
++ NK DL N A+SV
Sbjct: 123 VMANKQDLPN-ALSV 136
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 31.1 bits (67), Expect = 0.81
Identities = 27/128 (21%), Positives = 56/128 (43%)
Frame = +1
Query: 55 LHGKSSWLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 234
L GK L+++++G GKT+++ + N TIG + +V+ + + +
Sbjct: 85 LLGKDE-LRLLMVGLDAAGKTTILYHLKLDEPVNTIP-TIGFNV----EVVEYKNIKFTV 138
Query: 235 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 414
WD GQ++ + L +++ + V D N ++ ++E + +
Sbjct: 139 WDIGGQDKIRLLWRLYFQETQGLIFVVD---SNDRDRIQEAKEELFKLLKEEELKRAALL 195
Query: 415 ILGNKVDL 438
+L NK DL
Sbjct: 196 VLANKQDL 203
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 427 KVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTI 558
++DL R +S K GQ+W +++ D+ Y+ETS+ V F +
Sbjct: 37 QIDLISRRVISSKEGQKWARAQ-DLKYYETSSANGQGVYEMFNDL 80
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 82 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRI----VTMQIWDTAG 249
++ILG GKT+L+ Q + +KF Y T + +I V + WD G
Sbjct: 24 ILILGLDNAGKTTLLEQ-IKRKFCKTYNGIPFEKITTTVGLNIGKITISHVKLMFWDLGG 82
Query: 250 QERFQSL 270
Q+ ++L
Sbjct: 83 QQELRTL 89
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 82 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD 213
V +LG +G GKT ++ +NK + NQ + + D K V D+
Sbjct: 2508 VFVLGPAGTGKTQVIRS-LNKTYMNQKRKPMMFDLNPKAVTADE 2550
>SB_11465| Best HMM Match : EGF (HMM E-Value=0.13)
Length = 695
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 353 LSKDLNVLGAVTSKTNTQQSAPR*KATPSDWNRSWPAVSHICIVTILSSTITSFV 189
L+K LN+ V S N+ + + P + +SH ++TIL S I+ F+
Sbjct: 525 LNKQLNISIGVISTWNSTRDIRKENIDPESRKKDEVHISHAVVITILVSGISGFL 579
>SB_3199| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 399
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = -2
Query: 344 DLNVLGAVTSKTNTQ-QSAPR*KATPSDWNRSWPAVSHICIV--TILSSTITSFVRKSAP 174
DLN+ G T + Q QS+ W ++ +++ I+ ++L +++T +V
Sbjct: 2 DLNLTGNFTFPNSKQNQSSMCLPYKDEVWVKALKGATYVLIIALSLLGNSLTIYVISKKK 61
Query: 173 IVALYWLENFLLTN*FIRDVFPTPLSPRIIT 81
A+ NFL+ N + D+F T +S I+T
Sbjct: 62 --AMRSTTNFLIANKCVADLFITCVSMPIVT 90
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 28.7 bits (61), Expect = 4.3
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 13/138 (9%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKF-SN---------QYKATIGADFLTKEVIVDD--RI 219
+K++++G G GKT+L+ + SN ++ I L++ I
Sbjct: 667 MKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVDEWSVQISTSLLSRIGITSGIGPT 726
Query: 220 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT-APNTFKSLESWRDEFLIQASPRDP 396
+T+ WD AGQ + + F + + V++ T ++L SW L+ R P
Sbjct: 727 ITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSW----LLNIKARAP 782
Query: 397 DNFPFVILGNKVDLDNRA 450
+ +I+G +D RA
Sbjct: 783 YS-DVIIIGTHLDRIPRA 799
>SB_3591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1585
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = -3
Query: 520 WHLSQNTGCRSCS----GTIVDHV*QKRHDYPSRLC 425
W+LS N GC+ GT +D + +H+ P +C
Sbjct: 875 WYLSDNNGCKKSKENLVGTTLDQENECQHEIPKDVC 910
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 67 SSWLKVIILGDSGVGKTSLMNQFVNKK 147
+S +++ G G GKTSL+N F++K+
Sbjct: 359 TSGRNILLTGPRGCGKTSLINDFLDKQ 385
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +1
Query: 76 LKVIILGDSGVGKTSLMNQFVNKKFSN 156
+KV++LG GKTSL+ ++++ +F++
Sbjct: 28 VKVVLLGKEYSGKTSLVERYLHHRFND 54
>SB_9653| Best HMM Match : Retrotrans_gag (HMM E-Value=0.05)
Length = 626
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 3/25 (12%)
Frame = -3
Query: 325 QLRQKLIRSNPP---HDRKLLQAIG 260
+LR++L RSNPP +DRKL+ A G
Sbjct: 323 ELRKELRRSNPPNQNYDRKLIAAPG 347
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 300 AIRPTIESYSKRLEPFLA 247
+++PT SY K+ EPFLA
Sbjct: 2755 SVKPTAASYEKKSEPFLA 2772
>SB_8527| Best HMM Match : zf-C2H2 (HMM E-Value=4.3e-21)
Length = 1049
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 24 HHCVKMLCKMSSRKKLLAKGNYPG*QRCWKNISDESVC 137
HH C+ SS + +A + G + W N D C
Sbjct: 755 HHAAVTHCRFSSSGRTIASADTDGIVKVWTNYPDIKTC 792
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,970,272
Number of Sequences: 59808
Number of extensions: 436871
Number of successful extensions: 1402
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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