Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0531
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.0  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 449 LYTKSVNFFTIKFEL 493
           +Y K + FF I FE+
Sbjct: 65  IYCKEIRFFEISFEI 79


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 296  VGKLYKCIVSTTITTNK 246
            V KL+KC++ T    NK
Sbjct: 1081 VNKLFKCMICTYKADNK 1097


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 296  VGKLYKCIVSTTITTNK 246
            V KL+KC++ T    NK
Sbjct: 1081 VNKLFKCMICTYKADNK 1097


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +2

Query: 449 LYTKSVNFFTIKFELYS*TFYILYASTFHAK 541
           ++ K V  F  +  LY   +Y++  +TF+ +
Sbjct: 61  IHIKIVLMFFKEASLYCFNYYVIVVTTFYKR 91


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 498 ARPSTSYMPVPSMPRTI 548
           A P+   +P PS PR+I
Sbjct: 53  ASPTPGDVPTPSSPRSI 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,597
Number of Sequences: 336
Number of extensions: 3782
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)