Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0529
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            25   3.0  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   5.2  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   5.2  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 657 IRSDFAAVMIFKHSTTPGTDSCSKAEYSPSVCS 559
           I ++   V+IF  S+   + S   AE SPS  S
Sbjct: 654 ISAEMRTVLIFAPSSNQSSSSTPNAEQSPSASS 686


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 78  IFFELLCRDLNMLERVYTQVR 140
           I F+ +CRD+  L R+Y   R
Sbjct: 218 IEFQKVCRDIEYLTRLYVSYR 238


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/52 (21%), Positives = 19/52 (36%)
 Frame = +2

Query: 101  GSQHVGKGVHTSSVTTEKNVCYAPFGALQPRATKEGRIKCTLIPGDGVGPEL 256
            G   +G+G+HT  +         PF  +    T   ++  T       G +L
Sbjct: 1025 GGTEMGQGLHTKMIQVAATALGIPFDRIHISETSTDKVPNTSATAASAGSDL 1076


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,261
Number of Sequences: 2352
Number of extensions: 16493
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)