Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0529
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical pr... 197 5e-51
AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical ... 138 3e-33
Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical pr... 135 3e-32
Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr... 31 0.58
U41270-5|AAA82442.2| 364|Caenorhabditis elegans Hypothetical pr... 30 1.8
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 29 3.1
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 4.1
U56961-5|AAK39298.2| 156|Caenorhabditis elegans Hypothetical pr... 27 9.5
L14714-1|AAA28180.2| 244|Caenorhabditis elegans Temporarily ass... 27 9.5
DQ298419-1|ABC33802.1| 230|Caenorhabditis elegans metaxin 2 pro... 27 9.5
>Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical
protein C37E2.1 protein.
Length = 379
Score = 197 bits (481), Expect = 5e-51
Identities = 96/171 (56%), Positives = 125/171 (73%), Gaps = 3/171 (1%)
Frame = +2
Query: 179 ALQPRATKEGRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLE 358
A +P ++K T+IPGDGVGPEL+Y VQ++ K IP++FE F SEV+ T S+ +E
Sbjct: 32 APRPPTELNQKLKVTIIPGDGVGPELIYTVQDIVKQTGIPIEFEEIFLSEVHYTRSSSIE 91
Query: 359 DVVNSIAVNK-ICIKGILATPDFSHT-GELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 532
+ V SI N + +KG + HT GELQ LNM+LR +LDL+ANVVH+K+L +K RH
Sbjct: 92 NAVESIGRNNNVALKGAIEESAVLHTEGELQGLNMRLRRSLDLFANVVHIKTLDGIKTRH 151
Query: 533 -QDVDCIIIREQTEGEYSALEHESVPGVVECLKIITAAKSERIAKFAFDYA 682
+ +D +I+REQTEGEYS+LEHE VPGV+ECLKI T K+ERIAKFAFDYA
Sbjct: 152 GKQLDFVIVREQTEGEYSSLEHELVPGVIECLKISTRTKAERIAKFAFDYA 202
>AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical
protein C30F12.7 protein.
Length = 373
Score = 138 bits (335), Expect = 3e-33
Identities = 68/165 (41%), Positives = 101/165 (61%)
Frame = +2
Query: 188 PRATKEGRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVV 367
P A GR +PGDG+GPE++ ++ +F PV+FE S + L ++ +
Sbjct: 28 PLAKYGGRHTVCALPGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVS--SSLLDGDMDAAM 85
Query: 368 NSIAVNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRHQDVDC 547
+I N + IKG + T + + N++LR LDLYAN++H ++P V RH +D
Sbjct: 86 LAIERNGVAIKGNIETKH--DDPQFNSRNVELRTKLDLYANILHCVTIPTVPTRHSGIDI 143
Query: 548 IIIREQTEGEYSALEHESVPGVVECLKIITAAKSERIAKFAFDYA 682
++IRE TEGEYS LEHE+VPG+VE +KI+T K ERI++ AF+YA
Sbjct: 144 VLIRENTEGEYSGLEHEAVPGIVESIKIVTREKIERISRMAFEYA 188
>Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical
protein F35G12.2 protein.
Length = 396
Score = 135 bits (326), Expect = 3e-32
Identities = 82/215 (38%), Positives = 121/215 (56%), Gaps = 10/215 (4%)
Frame = +2
Query: 68 LSRNIFRAVMQGSQHVGKGVHTSSVTTEKNVCYAPFGA--LQPRATK----EGRIKCTLI 229
+S N+ ++ S++V V + V T N F + LQ TK GR T++
Sbjct: 1 MSSNVLGHTLRSSKNV---VQKAFVATSPNSDMLRFRSPVLQTNTTKLARYGGRHNVTVL 57
Query: 230 PGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGIL 409
PGDG+GPE+++ V+ + A PVDFE + S L + + +I N + +KG +
Sbjct: 58 PGDGIGPEMLHHVERILSAVQAPVDFEVVNLTSKEDA-SEDLAEAITAIKRNGVALKGNI 116
Query: 410 ATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRHQDVDCIIIREQTEGEYSAL 589
T F + + N++LR L+LYANV+H ++P V RH +D +IIRE TEGEYS
Sbjct: 117 ETK-FDNPSFVSR-NLELRRQLNLYANVLHCSTIPTVPSRHTGIDMVIIRENTEGEYSGN 174
Query: 590 EHESV----PGVVECLKIITAAKSERIAKFAFDYA 682
EHE+V P VVE LK++T KSE+I +FAF +A
Sbjct: 175 EHEAVNAPHPRVVESLKVVTREKSEQITRFAFQFA 209
>Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical
protein F43G9.1 protein.
Length = 358
Score = 120 bits (288), Expect = 1e-27
Identities = 66/159 (41%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Frame = +2
Query: 215 KCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEV---NPTLSAPLEDVVNSIAVN 385
+ TLIPGDG+GPE+ +VQ++F+AA P+ ++ + V + P + + N
Sbjct: 26 RVTLIPGDGIGPEISASVQKIFEAADAPIAWDPVDVTPVKGRDGVFRIPSR-CIELMHAN 84
Query: 386 KICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRHQDVDCIIIREQ 565
K+ +KG L TP G ++LN+ +R LYANV +SL K + +VD + IRE
Sbjct: 85 KVGLKGPLETP--IGKGH-RSLNLAVRKEFSLYANVRPCRSLEGHKTLYDNVDVVTIREN 141
Query: 566 TEGEYSALEHESVPGVVECLKIITAAKSERIAKFAFDYA 682
TEGEYS +EHE VPGVV+ +K+IT S +A FAF+YA
Sbjct: 142 TEGEYSGIEHEIVPGVVQSIKLITETASRNVASFAFEYA 180
>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/58 (24%), Positives = 35/58 (60%)
Frame = +2
Query: 479 LYANVVHVKSLPNVKCRHQDVDCIIIREQTEGEYSALEHESVPGVVECLKIITAAKSE 652
+ ++++ + S+P+++ R + +DC++ QT+G + L S P V++ + I + +E
Sbjct: 836 IISSLLALCSIPHIQVRRRQLDCVMSLMQTDGAF--LLSTSWPNVIQIISAIIDSDTE 891
>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/58 (24%), Positives = 35/58 (60%)
Frame = +2
Query: 479 LYANVVHVKSLPNVKCRHQDVDCIIIREQTEGEYSALEHESVPGVVECLKIITAAKSE 652
+ ++++ + S+P+++ R + +DC++ QT+G + L S P V++ + I + +E
Sbjct: 836 IISSLLALCSIPHIQVRRRQLDCVMSLMQTDGAF--LLSTSWPNVIQIISAIIDSDTE 891
>U41270-5|AAA82442.2| 364|Caenorhabditis elegans Hypothetical
protein AH9.4 protein.
Length = 364
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 386 KICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 532
+ I G T FSHTGE TL+ K AL + ++ + P+VK H
Sbjct: 217 RYAISGPATTKRFSHTGETDTLDNKAHVALAI--SITASTNTPSVKRIH 263
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 434 GELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 532
G LQT++ +N LDLY+ + K K RH
Sbjct: 169 GSLQTIHFLTKNLLDLYSQLFSRKITAEFKTRH 201
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 434 GELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 532
G LQT++ +N LDLY+ + K K RH
Sbjct: 169 GSLQTIHFLTKNLLDLYSQLFSRKITAEFKTRH 201
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +2
Query: 308 ESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFSHTGELQTLNMKLRNALDLYA 487
ES S N L PL D+ N + + +GI+ F H G+++ +++ ++
Sbjct: 795 ESVILSMANDNLE-PLGDLKNLNQKSTVKCEGIICATTFVHRGQIRFSGLEVNILTPIF- 852
Query: 488 NVVHVKSLPNVKCRHQDVDCIII 556
VH L NV+ + V + I
Sbjct: 853 --VHEGRLTNVENKQNHVKHLFI 873
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +2
Query: 308 ESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFSHTGELQTLNMKLRNALDLYA 487
ES S N L PL D+ N + + +GI+ F H G+++ +++ ++
Sbjct: 795 ESVILSMANDNLE-PLGDLKNLNQKSTVKCEGIICATTFVHRGQIRFSGLEVNILTPIF- 852
Query: 488 NVVHVKSLPNVKCRHQDVDCIII 556
VH L NV+ + V + I
Sbjct: 853 --VHEGRLTNVENKQNHVKHLFI 873
>U56961-5|AAK39298.2| 156|Caenorhabditis elegans Hypothetical
protein T19D7.6 protein.
Length = 156
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 383 NKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVK 523
N + + P F++ EL N K+RN L AN+ K+ PN++
Sbjct: 55 NNVLTENSFNMPKFANLKELSVRNNKIRNLGVLLANI--QKNCPNIE 99
>L14714-1|AAA28180.2| 244|Caenorhabditis elegans Temporarily
assigned gene nameprotein 354, isoform a protein.
Length = 244
Score = 27.5 bits (58), Expect = 9.5
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 AVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFSH-TGE 439
AVQ + S+P + N +P + VV + +NK I G A DF H G
Sbjct: 31 AVQTFLRMTSLPFNVRQ----RPNVDFISP-DGVVPLLKINKTLITGFNAIVDFVHKKGV 85
Query: 440 LQTLNMKLRNALDLYANVVHVKSL 511
T ++ D+ AN+ ++ L
Sbjct: 86 TLTSHLSETQVADMRANISMIEHL 109
>DQ298419-1|ABC33802.1| 230|Caenorhabditis elegans metaxin 2
protein.
Length = 230
Score = 27.5 bits (58), Expect = 9.5
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 AVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFSH-TGE 439
AVQ + S+P + N +P + VV + +NK I G A DF H G
Sbjct: 47 AVQTFLRMTSLPFNVRQ----RPNVDFISP-DGVVPLLKINKTLITGFNAIVDFVHKKGV 101
Query: 440 LQTLNMKLRNALDLYANVVHVKSL 511
T ++ D+ AN+ ++ L
Sbjct: 102 TLTSHLSETQVADMRANISMIEHL 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,335,890
Number of Sequences: 27780
Number of extensions: 372173
Number of successful extensions: 1111
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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