Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0528
(486 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U5L1 Cluster: Signal recognition particle receptor su... 235 3e-61
UniRef50_P08240 Cluster: Signal recognition particle receptor su... 213 2e-54
UniRef50_A7RR36 Cluster: Predicted protein; n=2; Nematostella ve... 210 1e-53
UniRef50_Q5D9K7 Cluster: SJCHGC06360 protein; n=2; cellular orga... 200 1e-50
UniRef50_Q5KKG9 Cluster: Signal recognition particle binding pro... 191 6e-48
UniRef50_Q9M0A0 Cluster: Signal recognition particle receptor-li... 182 4e-45
UniRef50_A5K2S1 Cluster: Signal recognition particle receptor, p... 180 2e-44
UniRef50_Q4PF71 Cluster: Putative uncharacterized protein; n=1; ... 177 1e-43
UniRef50_Q54ZR7 Cluster: Signal recognition particle receptor al... 164 8e-40
UniRef50_Q5CV65 Cluster: Srp101p GTpase. signal recognition part... 163 1e-39
UniRef50_A7ANF7 Cluster: SRP54-type protein, GTPase domain conta... 163 2e-39
UniRef50_Q4N567 Cluster: Signal recognition particle receptor al... 159 2e-38
UniRef50_Q22T92 Cluster: SRP54-type protein, GTPase domain conta... 154 1e-36
UniRef50_A0E7D9 Cluster: Chromosome undetermined scaffold_81, wh... 151 8e-36
UniRef50_Q4Q161 Cluster: Signal recognition particle receptor li... 149 4e-35
UniRef50_UPI0000499FED Cluster: Signal recognition particle rece... 148 6e-35
UniRef50_Q01F74 Cluster: SrrA undefined product; n=1; Ostreococc... 142 4e-33
UniRef50_A4RST6 Cluster: Predicted protein; n=1; Ostreococcus lu... 142 4e-33
UniRef50_Q7R237 Cluster: GLP_630_47100_45385; n=2; Giardia intes... 129 3e-29
UniRef50_A2EHQ0 Cluster: SRP54-type protein, putative; n=1; Tric... 126 3e-28
UniRef50_Q8SR80 Cluster: SIGNAL RECOGNITION PARTICLE RECEPTOR AL... 120 1e-26
UniRef50_Q2U958 Cluster: Signal recognition particle receptor; n... 115 7e-25
UniRef50_A1CMF5 Cluster: Signal sequence receptor alpha subunit,... 113 2e-24
UniRef50_Q8U051 Cluster: Signal recognition particle receptor; n... 94 2e-18
UniRef50_Q8PYQ0 Cluster: Signal recognition particle subunit Ffh... 91 9e-18
UniRef50_A5UL28 Cluster: Signal recognition particle GTPase SRP5... 91 9e-18
UniRef50_A3LNS4 Cluster: GTP binding signal recognition particle... 90 3e-17
UniRef50_Q57739 Cluster: Probable signal recognition particle pr... 90 3e-17
UniRef50_Q9Y7B0 Cluster: Signal sequence receptor alpha subunit;... 89 5e-17
UniRef50_A7DRN3 Cluster: Signal recognition particle-docking pro... 86 5e-16
UniRef50_P32916 Cluster: Signal recognition particle receptor su... 85 6e-16
UniRef50_A1RXA8 Cluster: Signal recognition particle-docking pro... 83 2e-15
UniRef50_O43032 Cluster: Signal recognition particle receptor al... 81 1e-14
UniRef50_UPI00015BB111 Cluster: signal recognition particle-dock... 79 4e-14
UniRef50_A0RUF0 Cluster: Signal recognition particle GTPase; n=1... 79 5e-14
UniRef50_Q5UY25 Cluster: Signal recognition particle receptor; n... 78 1e-13
UniRef50_A3CWZ1 Cluster: Signal recognition particle-docking pro... 77 2e-13
UniRef50_A3DNH8 Cluster: Signal recognition particle-docking pro... 76 4e-13
UniRef50_A4XLF5 Cluster: Signal recognition particle protein; n=... 76 5e-13
UniRef50_Q2FS95 Cluster: Signal recognition particle-docking pro... 75 6e-13
UniRef50_Q6KYV1 Cluster: Signal recognition particle receptor Ft... 75 9e-13
UniRef50_A2BN60 Cluster: Signal recognition particle GTPase; n=2... 74 1e-12
UniRef50_Q54431 Cluster: Signal recognition particle protein; n=... 73 5e-12
UniRef50_P27414 Cluster: Probable signal recognition particle pr... 70 2e-11
UniRef50_A6Q553 Cluster: Signal recognition particle protein; n=... 70 3e-11
UniRef50_Q01442 Cluster: Signal recognition particle protein; n=... 66 3e-10
UniRef50_P56005 Cluster: Signal recognition particle protein; n=... 65 9e-10
UniRef50_O07347 Cluster: Signal recognition particle protein; n=... 64 1e-09
UniRef50_A1RMB9 Cluster: Signal recognition particle protein; n=... 64 2e-09
UniRef50_Q8ZTT8 Cluster: Signal recognition particle protein (Do... 64 2e-09
UniRef50_P74214 Cluster: Signal recognition particle protein; n=... 64 2e-09
UniRef50_O67615 Cluster: Signal recognition particle protein; n=... 64 2e-09
UniRef50_Q6MDH1 Cluster: Probable signal recognition particle ch... 63 3e-09
UniRef50_A6BZ37 Cluster: Signal recognition particle protein; n=... 63 4e-09
UniRef50_A4RQK2 Cluster: IISP family transporter: signal recogni... 63 4e-09
UniRef50_A6DB28 Cluster: Signal recognition particle protein; n=... 62 6e-09
UniRef50_Q895M4 Cluster: Signal recognition particle, subunit ff... 62 9e-09
UniRef50_Q5QUU7 Cluster: Signal recognition particle GTPase; n=4... 61 1e-08
UniRef50_A7DS34 Cluster: GTP-binding signal recognition particle... 61 1e-08
UniRef50_P0AGD9 Cluster: Signal recognition particle protein; n=... 61 1e-08
UniRef50_Q8KD87 Cluster: Signal recognition particle protein; n=... 60 2e-08
UniRef50_A7CS33 Cluster: Signal recognition particle protein; n=... 60 2e-08
UniRef50_A6DNU8 Cluster: Signal recognition particle; n=1; Lenti... 60 2e-08
UniRef50_A4E6S7 Cluster: Putative uncharacterized protein; n=1; ... 60 2e-08
UniRef50_Q9AXU1 Cluster: Chloroplast SRP54; n=1; Chlamydomonas r... 60 2e-08
UniRef50_P66845 Cluster: Signal recognition particle protein; n=... 60 3e-08
UniRef50_P37107 Cluster: Signal recognition particle 54 kDa prot... 59 5e-08
UniRef50_A7HFQ6 Cluster: Signal recognition particle protein; n=... 59 6e-08
UniRef50_A3UI71 Cluster: Probable cell division protein; n=1; Oc... 58 8e-08
UniRef50_Q5LTS4 Cluster: Signal recognition particle-docking pro... 58 1e-07
UniRef50_O83431 Cluster: Signal recognition particle protein; n=... 58 1e-07
UniRef50_A7ICC8 Cluster: Signal recognition particle-docking pro... 57 2e-07
UniRef50_Q8D2V4 Cluster: Ffh protein; n=1; Wigglesworthia glossi... 57 2e-07
UniRef50_Q5P9Q2 Cluster: Cell division protein; n=2; Anaplasma|R... 57 2e-07
UniRef50_Q57AW4 Cluster: FtsY, signal recognition particle-docki... 56 3e-07
UniRef50_Q7UI11 Cluster: Signal recognition particle protein; n=... 56 6e-07
UniRef50_A4E6S8 Cluster: Putative uncharacterized protein; n=1; ... 56 6e-07
UniRef50_Q89AE4 Cluster: Signal recognition particle protein; n=... 56 6e-07
UniRef50_Q11CW5 Cluster: Signal recognition particle-docking pro... 55 1e-06
UniRef50_O67066 Cluster: Cell division protein ftsY homolog; n=5... 55 1e-06
UniRef50_Q0BWE6 Cluster: Signal recognition particle-docking pro... 54 1e-06
UniRef50_A1RXH9 Cluster: GTP-binding signal recognition particle... 54 2e-06
UniRef50_P44518 Cluster: Signal recognition particle protein; n=... 54 2e-06
UniRef50_UPI00015BCE02 Cluster: UPI00015BCE02 related cluster; n... 53 3e-06
UniRef50_Q8G736 Cluster: FtsY signal recognition particle; n=4; ... 53 3e-06
UniRef50_A6FXA0 Cluster: Signal recognition particle protein; n=... 53 3e-06
UniRef50_A0RUN9 Cluster: Signal recognition particle GTPase; n=1... 53 4e-06
UniRef50_Q8TUY9 Cluster: Signal recognition 54 kDa protein; n=4;... 53 4e-06
UniRef50_Q6MBM6 Cluster: Probable signal recognition particle; n... 52 5e-06
UniRef50_Q2RV63 Cluster: Cell division transporter substrate-bin... 52 5e-06
UniRef50_A7H885 Cluster: Signal recognition particle-docking pro... 52 5e-06
UniRef50_Q4UKH4 Cluster: Signal recognition particle protein; n=... 52 5e-06
UniRef50_A5EYA3 Cluster: Signal recognition particle FtsY; n=2; ... 52 7e-06
UniRef50_P75054 Cluster: Signal recognition particle protein; n=... 52 7e-06
UniRef50_O05289 Cluster: FtsY protein; n=5; Mollicutes|Rep: FtsY... 51 1e-05
UniRef50_O59332 Cluster: Putative uncharacterized protein PH1670... 51 1e-05
UniRef50_Q4FT71 Cluster: Cell division transporter substrate-bin... 50 2e-05
UniRef50_A5CCH6 Cluster: Cell division ABC transporter, periplas... 50 2e-05
UniRef50_A3IG83 Cluster: Recognition particle-docking protein; n... 50 2e-05
UniRef50_A4WFP3 Cluster: Signal recognition particle-docking pro... 50 3e-05
UniRef50_A3VPZ8 Cluster: FtsY, signal recognition particle-docki... 50 3e-05
UniRef50_A3ER96 Cluster: Signal recognition particle GTPase; n=1... 50 3e-05
UniRef50_Q895M6 Cluster: Signal recognition particle receptor ft... 50 4e-05
UniRef50_Q8GDY7 Cluster: Signal recognition particle receptor Ft... 50 4e-05
UniRef50_P49966 Cluster: Signal recognition particle 54 kDa prot... 50 4e-05
UniRef50_Q2GDL8 Cluster: Signal recognition particle-docking pro... 49 5e-05
UniRef50_Q0HPY1 Cluster: Signal recognition particle-docking pro... 49 5e-05
UniRef50_A3ER43 Cluster: Signal recognition particle GTPase; n=2... 49 6e-05
UniRef50_A2E0A3 Cluster: SRP54-type protein, putative; n=2; Tric... 49 6e-05
UniRef50_O15821 Cluster: Signal recognition particle 54 kDa prot... 49 6e-05
UniRef50_Q9PC71 Cluster: Cell division protein; n=11; Xanthomona... 48 9e-05
UniRef50_Q058E9 Cluster: Signal recognition particle receptor; n... 48 9e-05
UniRef50_Q97ZE7 Cluster: Signal recognition 54 kDa protein; n=8;... 48 9e-05
UniRef50_Q6YPP7 Cluster: Signal recognition particle GTPase; n=2... 48 1e-04
UniRef50_Q8ZT95 Cluster: Signal recognition 54 kDa protein; n=5;... 48 1e-04
UniRef50_Q9Z966 Cluster: Signal Recognition Particle GTPase; n=8... 48 1e-04
UniRef50_P37106 Cluster: Signal recognition particle 54 kDa prot... 48 1e-04
UniRef50_Q97IA0 Cluster: Signal recognition particle GTPase, Fts... 47 2e-04
UniRef50_A1IE17 Cluster: Cell division protein FtsY; n=2; Bacter... 47 2e-04
UniRef50_P51835 Cluster: Cell division protein ftsY homolog; n=4... 47 2e-04
UniRef50_Q1V114 Cluster: Cell division particle; n=2; Candidatus... 47 3e-04
UniRef50_Q83MV0 Cluster: Signal recognition particle protein; n=... 46 3e-04
UniRef50_Q64TK4 Cluster: Recognition particle-docking protein Ft... 46 3e-04
UniRef50_A2F1E7 Cluster: SRP54-type protein, putative; n=1; Tric... 46 3e-04
UniRef50_Q68VX4 Cluster: Cell division protein ftsY homolog; n=2... 46 3e-04
UniRef50_O51103 Cluster: Cell division protein, putative; n=3; B... 46 5e-04
UniRef50_A2STI3 Cluster: GTP-binding signal recognition particle... 46 5e-04
UniRef50_Q7VQG1 Cluster: 4.5S-RNP protein, GTP binding export fa... 46 6e-04
UniRef50_Q6YPP6 Cluster: Signal recognition particle-docking pro... 46 6e-04
UniRef50_Q60CH3 Cluster: Cytochrome oxidase assembly family prot... 46 6e-04
UniRef50_Q0EZI9 Cluster: Signal recognition particle GTPase; n=1... 46 6e-04
UniRef50_Q010M2 Cluster: Signal recognition particle 54kDa subun... 46 6e-04
UniRef50_O32861 Cluster: Cell division protein ftsY homolog; n=1... 46 6e-04
UniRef50_P57137 Cluster: Cell division protein ftsY homolog; n=2... 46 6e-04
UniRef50_Q7MXM2 Cluster: Signal recognition particle-docking pro... 45 8e-04
UniRef50_A5US56 Cluster: Signal recognition particle-docking pro... 45 8e-04
UniRef50_Q57565 Cluster: Signal recognition 54 kDa protein; n=13... 45 8e-04
UniRef50_Q1NXJ3 Cluster: Cell division transporter substrate-bin... 45 0.001
UniRef50_Q9RS67 Cluster: Signal recognition particle-docking pro... 44 0.001
UniRef50_Q7VRI6 Cluster: Cell division protein FtsY; n=1; Candid... 44 0.001
UniRef50_A0C5I7 Cluster: Chromosome undetermined scaffold_15, wh... 44 0.001
UniRef50_P20424 Cluster: Signal recognition particle subunit SRP... 44 0.001
UniRef50_O51637 Cluster: Signal recognition particle protein; n=... 44 0.002
UniRef50_A6T2T2 Cluster: Signal recognition particle receptor; n... 44 0.002
UniRef50_A6DTV8 Cluster: Fused Signal Recognition Particle (SRP)... 44 0.002
UniRef50_A3YMT1 Cluster: Signal recognition particle-docking pro... 44 0.002
UniRef50_Q89B28 Cluster: Cell division protein ftsY homolog; n=1... 44 0.002
UniRef50_Q7UT17 Cluster: Cell division protein FtsY; n=2; Planct... 44 0.002
UniRef50_Q7VPR9 Cluster: FtsY cell division protein; n=8; Chlamy... 44 0.002
UniRef50_Q8SS36 Cluster: SIGNAL RECOGNITION PARTICLE 54kDa SUBUN... 43 0.003
UniRef50_Q9HMN5 Cluster: Signal recognition 54 kDa protein; n=14... 43 0.003
UniRef50_P14929 Cluster: Cell division protein ftsY homolog; n=2... 43 0.003
UniRef50_Q9PR03 Cluster: SRP family of GTP-binding proteins-cell... 43 0.004
UniRef50_Q315N5 Cluster: Signal recognition particle-docking pro... 43 0.004
UniRef50_Q1ILB3 Cluster: Signal recognition particle-docking pro... 42 0.006
UniRef50_Q0IE72 Cluster: Signal recognition particle-docking pro... 42 0.006
UniRef50_A7TKC3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.007
UniRef50_Q5PAC1 Cluster: Signal recognition particle protein; n=... 42 0.010
UniRef50_A7D784 Cluster: GTP-binding signal recognition particle... 42 0.010
UniRef50_Q7NP07 Cluster: Glr0251 protein; n=7; Cyanobacteria|Rep... 41 0.013
UniRef50_Q1AW79 Cluster: Signal recognition particle-docking pro... 41 0.013
UniRef50_P73930 Cluster: Cell division protein ftsY homolog; n=1... 41 0.013
UniRef50_O33010 Cluster: Cell division protein ftsY homolog; n=9... 41 0.013
UniRef50_P66843 Cluster: Cell division protein ftsY homolog; n=4... 41 0.013
UniRef50_Q74IQ0 Cluster: Signal recognition particle receptor Ft... 41 0.017
UniRef50_Q7R3W6 Cluster: GLP_68_88884_87292; n=1; Giardia lambli... 40 0.030
UniRef50_O25458 Cluster: Cell division protein ftsY homolog; n=1... 40 0.039
UniRef50_Q8C1Y6 Cluster: Colon RCB-0549 Cle-H3 cDNA, RIKEN full-... 39 0.052
UniRef50_Q6MNR5 Cluster: Signal recognition particle-docking pro... 39 0.052
UniRef50_A6GK47 Cluster: Signal recognition particle-docking pro... 39 0.052
UniRef50_A7PXY2 Cluster: Chromosome chr15 scaffold_37, whole gen... 39 0.052
UniRef50_Q1VJW0 Cluster: Cell division particle; n=2; Psychrofle... 39 0.069
UniRef50_Q6CRH5 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 39 0.069
UniRef50_Q97QH0 Cluster: Signal recognition particle-docking pro... 38 0.091
UniRef50_Q9SWS7 Cluster: Chloroplast SRP receptor homolog, alpha... 38 0.091
UniRef50_Q9HKT0 Cluster: Signal recognition 54 kDa protein; n=4;... 38 0.12
UniRef50_P61011 Cluster: Signal recognition particle 54 kDa prot... 38 0.12
UniRef50_Q649P3 Cluster: Dihydropteroate synthase; n=1; uncultur... 38 0.16
UniRef50_Q4PB16 Cluster: Putative uncharacterized protein; n=1; ... 37 0.21
UniRef50_UPI00006CE525 Cluster: SRP54-type protein, GTPase domai... 37 0.28
UniRef50_Q6BNS1 Cluster: Debaryomyces hansenii chromosome E of s... 36 0.37
UniRef50_Q0UIN8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.37
UniRef50_Q9AAK0 Cluster: Chemotaxis response regulator protein-g... 36 0.37
UniRef50_A1V7R2 Cluster: Dipeptide transport system permease pro... 36 0.49
UniRef50_A2DJ16 Cluster: Putative uncharacterized protein; n=1; ... 36 0.49
UniRef50_Q2GDM3 Cluster: Signal recognition particle protein; n=... 36 0.64
UniRef50_UPI0000F2BF27 Cluster: PREDICTED: similar to hCG2041257... 35 0.85
UniRef50_Q03NW2 Cluster: Predicted membrane protein; n=1; Lactob... 35 0.85
UniRef50_A4SZX6 Cluster: TPR repeat-containing protein; n=1; Pol... 35 0.85
UniRef50_A3DCP5 Cluster: GTP-binding signal recognition particle... 35 1.1
UniRef50_Q92JD3 Cluster: Uncharacterized protein RC0134; n=3; sp... 35 1.1
UniRef50_Q7PQY3 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 34 1.5
UniRef50_Q8YLE7 Cluster: Heterocyst glycolipid synthase; n=10; N... 34 2.0
UniRef50_Q67K29 Cluster: Flagellar GTP-binding protein; n=1; Sym... 34 2.0
UniRef50_O83587 Cluster: Cell division protein; n=1; Treponema p... 34 2.0
UniRef50_Q3V8C0 Cluster: Flagellar biosynthetic protein FlhF, pu... 34 2.0
UniRef50_Q1MZ86 Cluster: Cytochrome c4; n=1; Oceanobacter sp. RE... 34 2.0
UniRef50_Q1EWK0 Cluster: GTP-binding signal recognition particle... 34 2.0
UniRef50_Q9FMK9 Cluster: Emb|CAB76911.1; n=5; Arabidopsis thalia... 34 2.0
UniRef50_P75362 Cluster: Cell division protein ftsY homolog; n=4... 34 2.0
UniRef50_Q1VMG0 Cluster: Signal recognition particle-docking pro... 33 2.6
UniRef50_Q945R1 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_Q4RGH1 Cluster: Chromosome 18 SCAF15100, whole genome s... 33 3.4
UniRef50_Q98IK0 Cluster: Mlr2365 protein; n=1; Mesorhizobium lot... 33 3.4
UniRef50_Q0EZU7 Cluster: Adenylate/Guanylate Cyclase; n=1; Marip... 33 3.4
UniRef50_A4XIZ5 Cluster: GTP-binding signal recognition particle... 33 3.4
UniRef50_A1ZLE9 Cluster: TPR repeat, putative; n=1; Microscilla ... 33 3.4
UniRef50_Q5KZ39 Cluster: Peptidase T; n=45; Bacteria|Rep: Peptid... 33 3.4
UniRef50_Q9X009 Cluster: Flagellar biosynthesis protein FlhF; n=... 33 4.5
UniRef50_Q73L22 Cluster: Signal recognition particle-docking pro... 33 4.5
UniRef50_A5GBS8 Cluster: Polymorphic outer membrane protein prec... 33 4.5
UniRef50_A0UJZ2 Cluster: Putative uncharacterized protein precur... 33 4.5
UniRef50_Q5CVM4 Cluster: Secreted protein with cysteine rich rep... 33 4.5
UniRef50_Q54YZ6 Cluster: RhoGEF domain-containing protein; n=1; ... 33 4.5
UniRef50_Q4QGJ2 Cluster: Surface antigen protein 2, putative; n=... 33 4.5
UniRef50_Q4P121 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_A6S7R9 Cluster: Predicted protein; n=1; Botryotinia fuc... 32 6.0
UniRef50_Q7W0U4 Cluster: Putative uncharacterized protein; n=3; ... 32 7.9
UniRef50_Q1RN79 Cluster: FlhF; n=1; Azospirillum brasilense|Rep:... 32 7.9
UniRef50_A7HUE0 Cluster: O-antigen polymerase; n=1; Parvibaculum... 32 7.9
UniRef50_A1ZYD1 Cluster: Putative uncharacterized protein; n=1; ... 32 7.9
UniRef50_A0T917 Cluster: Haemagluttinin motif; n=3; Burkholderia... 32 7.9
UniRef50_Q4H3V6 Cluster: ATRX protein; n=1; Ciona intestinalis|R... 32 7.9
UniRef50_A2DCA9 Cluster: Putative uncharacterized protein; n=2; ... 32 7.9
UniRef50_Q5KDM4 Cluster: Specific transcriptional repressor, put... 32 7.9
>UniRef50_Q9U5L1 Cluster: Signal recognition particle receptor
subunit alpha homolog; n=9; Coelomata|Rep: Signal
recognition particle receptor subunit alpha homolog -
Drosophila melanogaster (Fruit fly)
Length = 614
Score = 235 bits (576), Expect = 3e-61
Identities = 115/149 (77%), Positives = 125/149 (83%)
Frame = +1
Query: 40 GTREQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 219
G EQLRTHTR MV LYEKGYGKDAAGIAMEAI++A DT+ DVVL+
Sbjct: 437 GAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVLV 496
Query: 220 DTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSP 399
DTAGRMQDNEPLMR+L+KLI VN PD VLFVGEALVGNEAVDQLVKFNQ+LADYSS+ +P
Sbjct: 497 DTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENP 556
Query: 400 HVIDGIVLTKFDTIDDKVGAAISMTYITG 486
H+IDGIVLTKFDTIDDKVGAAISMTYITG
Sbjct: 557 HIIDGIVLTKFDTIDDKVGAAISMTYITG 585
>UniRef50_P08240 Cluster: Signal recognition particle receptor
subunit alpha; n=28; Coelomata|Rep: Signal recognition
particle receptor subunit alpha - Homo sapiens (Human)
Length = 638
Score = 213 bits (519), Expect = 2e-54
Identities = 108/148 (72%), Positives = 117/148 (79%)
Frame = +1
Query: 40 GTREQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 219
G EQLRTHTR MV L+EKGYGKDAAGIAMEAI +A + DVVL+
Sbjct: 460 GAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLV 519
Query: 220 DTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSP 399
DTAGRMQDN PLM ALAKLI VN PD VLFVGEALVGNEAVDQLVKFN+ALAD+S + +P
Sbjct: 520 DTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTP 579
Query: 400 HVIDGIVLTKFDTIDDKVGAAISMTYIT 483
+IDGIVLTKFDTIDDKVGAAISMTYIT
Sbjct: 580 RLIDGIVLTKFDTIDDKVGAAISMTYIT 607
>UniRef50_A7RR36 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 625
Score = 210 bits (513), Expect = 1e-53
Identities = 104/149 (69%), Positives = 116/149 (77%)
Frame = +1
Query: 40 GTREQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 219
G EQLRTH R V LYEKGYGKDAA IAM+AI +A + + DVVL+
Sbjct: 447 GAVEQLRTHVRHLNALHPPAHANGPPSVLLYEKGYGKDAASIAMDAINFAREQRVDVVLV 506
Query: 220 DTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSP 399
DTAGRMQDNEPLMRAL+KLI +N+PD VLFVGEALVGNEAVDQL KFNQALAD+SS P
Sbjct: 507 DTAGRMQDNEPLMRALSKLIKLNDPDLVLFVGEALVGNEAVDQLKKFNQALADHSSQDRP 566
Query: 400 HVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+IDGI+LTKFDTIDD+VGAAISMTY TG
Sbjct: 567 RLIDGILLTKFDTIDDQVGAAISMTYTTG 595
>UniRef50_Q5D9K7 Cluster: SJCHGC06360 protein; n=2; cellular
organisms|Rep: SJCHGC06360 protein - Schistosoma
japonicum (Blood fluke)
Length = 659
Score = 200 bits (489), Expect = 1e-50
Identities = 103/148 (69%), Positives = 110/148 (74%)
Frame = +1
Query: 40 GTREQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 219
G EQLRTH R MV LYE+GYG+DAA IA AI YA D DVVL+
Sbjct: 482 GAVEQLRTHVRKLNYIHPADQHGGQIMVELYEQGYGRDAASIARSAINYARDRHFDVVLV 541
Query: 220 DTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSP 399
DTAGRMQDNEPLMRALA LI N+PD VLFVGEALVGNEAVDQLVKFNQ+LAD+S S P
Sbjct: 542 DTAGRMQDNEPLMRALALLIQTNQPDLVLFVGEALVGNEAVDQLVKFNQSLADHSYSDHP 601
Query: 400 HVIDGIVLTKFDTIDDKVGAAISMTYIT 483
IDGIVLTKFDTIDDKVGAAISM I+
Sbjct: 602 RCIDGIVLTKFDTIDDKVGAAISMACIS 629
>UniRef50_Q5KKG9 Cluster: Signal recognition particle binding
protein, putative; n=1; Filobasidiella neoformans|Rep:
Signal recognition particle binding protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 674
Score = 191 bits (466), Expect = 6e-48
Identities = 98/154 (63%), Positives = 112/154 (72%), Gaps = 5/154 (3%)
Frame = +1
Query: 40 GTREQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 219
G EQLR H R + L+E+GYGKDAAGIA +AI YA + DVVLI
Sbjct: 492 GAVEQLRVHVRNLGALGEEMGQGQGKRIELFERGYGKDAAGIAKDAIAYAKEHAFDVVLI 551
Query: 220 DTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSP 399
DTAGRMQDNEPLMRALAKL+ VN PD ++FVGEALVGNEAVDQL KF++AL D+S +
Sbjct: 552 DTAGRMQDNEPLMRALAKLVTVNNPDKIVFVGEALVGNEAVDQLTKFDRALRDFSGAGVG 611
Query: 400 HV-----IDGIVLTKFDTIDDKVGAAISMTYITG 486
V IDGI+LTKFDTIDDKVGAA+SMTYITG
Sbjct: 612 GVARKRGIDGIILTKFDTIDDKVGAALSMTYITG 645
>UniRef50_Q9M0A0 Cluster: Signal recognition particle receptor-like
protein; n=14; Eukaryota|Rep: Signal recognition
particle receptor-like protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 634
Score = 182 bits (443), Expect = 4e-45
Identities = 94/149 (63%), Positives = 113/149 (75%)
Frame = +1
Query: 40 GTREQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 219
G EQLRTH R + ++EKGY KD A +A EAI+ A+ +DVVL+
Sbjct: 470 GAVEQLRTHARRL-------------QIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLV 516
Query: 220 DTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSP 399
DTAGRMQDNEPLMRAL+KLI +N+PD VLFVGEALVGN+AVDQL KFNQ L+D S+S +P
Sbjct: 517 DTAGRMQDNEPLMRALSKLINLNQPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSTSGNP 576
Query: 400 HVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+IDGI+LTKFDTIDDKVGAA+SM YI+G
Sbjct: 577 RLIDGILLTKFDTIDDKVGAALSMVYISG 605
>UniRef50_A5K2S1 Cluster: Signal recognition particle receptor,
putative; n=5; Plasmodium|Rep: Signal recognition
particle receptor, putative - Plasmodium vivax
Length = 602
Score = 180 bits (438), Expect = 2e-44
Identities = 85/122 (69%), Positives = 98/122 (80%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V LYEKGYGKDAA IA EAI YA V+LIDTAGRMQDNEPLMR+L KLI +N PD
Sbjct: 453 VFLYEKGYGKDAAAIAKEAIAYAKKENFHVILIDTAGRMQDNEPLMRSLGKLILINNPDF 512
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
+LFVGEALVGN+A+DQL KFNQAL D + + + IDGI+LTKFDT+DDKVG A+SM Y+
Sbjct: 513 ILFVGEALVGNDAIDQLKKFNQALTDATCNGNKRTIDGILLTKFDTVDDKVGTALSMVYL 572
Query: 481 TG 486
TG
Sbjct: 573 TG 574
>UniRef50_Q4PF71 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 705
Score = 177 bits (430), Expect = 1e-43
Identities = 88/151 (58%), Positives = 107/151 (70%), Gaps = 2/151 (1%)
Frame = +1
Query: 40 GTREQLRTHTRXXXXXXXXXXXXXXXM--VTLYEKGYGKDAAGIAMEAIRYASDTKTDVV 213
G EQLR H R + LYE+GYGKDAAGIA +A+ YA DVV
Sbjct: 525 GAVEQLRVHVRNLGQLRVDGVALEEQKGHIELYERGYGKDAAGIAKDALSYAKAEGFDVV 584
Query: 214 LIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSS 393
LIDTAGRMQDNEPLMRALAKL++VN PD ++FVGEALVGNEAVDQ+ KF+ A+ D+S S
Sbjct: 585 LIDTAGRMQDNEPLMRALAKLVSVNRPDKIIFVGEALVGNEAVDQITKFDGAMKDFSGVS 644
Query: 394 SPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+P +DG +LTK+DT+DDKVG A++ T TG
Sbjct: 645 NPRGLDGSLLTKWDTVDDKVGTALTTTSATG 675
>UniRef50_Q54ZR7 Cluster: Signal recognition particle receptor alpha
subunit; n=2; Dictyostelium discoideum|Rep: Signal
recognition particle receptor alpha subunit -
Dictyostelium discoideum AX4
Length = 615
Score = 164 bits (399), Expect = 8e-40
Identities = 80/124 (64%), Positives = 100/124 (80%), Gaps = 2/124 (1%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V L+E+GY KDAA +A +AI +A DT DVVLIDT GRMQ+NEPLM+AL+KL+ N D
Sbjct: 463 VHLFERGYSKDAASVAQDAIAFAKDTGYDVVLIDTTGRMQNNEPLMKALSKLVNQNNVDL 522
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHV--IDGIVLTKFDTIDDKVGAAISMT 474
VLFVGEALVGN+ VDQL KF+++L+ ++++ H+ IDGI+LTKFDTIDDKVGAAISM
Sbjct: 523 VLFVGEALVGNDGVDQLTKFDKSLSLLANTTQTHIRTIDGIILTKFDTIDDKVGAAISMV 582
Query: 475 YITG 486
Y TG
Sbjct: 583 YSTG 586
>UniRef50_Q5CV65 Cluster: Srp101p GTpase. signal recognition
particle receptor alpha subunit; n=2;
Cryptosporidium|Rep: Srp101p GTpase. signal recognition
particle receptor alpha subunit - Cryptosporidium parvum
Iowa II
Length = 548
Score = 163 bits (397), Expect = 1e-39
Identities = 82/122 (67%), Positives = 95/122 (77%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V LYEKGYGKDAA +A +AI YA D DVVLIDTAGRMQDN PLM++LAKL+ VN P+
Sbjct: 402 VQLYEKGYGKDAAMVAKDAISYAKDKGFDVVLIDTAGRMQDNVPLMKSLAKLVQVNNPNL 461
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
VLFVGEALVGN+AV QL FN+ L ++ IDGI+LTKFDT+DDKVGAA+SM Y
Sbjct: 462 VLFVGEALVGNDAVHQLQVFNKYLVEFGD----RPIDGIILTKFDTVDDKVGAALSMVYT 517
Query: 481 TG 486
TG
Sbjct: 518 TG 519
>UniRef50_A7ANF7 Cluster: SRP54-type protein, GTPase domain
containing protein; n=1; Babesia bovis|Rep: SRP54-type
protein, GTPase domain containing protein - Babesia
bovis
Length = 566
Score = 163 bits (396), Expect = 2e-39
Identities = 83/125 (66%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V L+E+GYGKD + I E +++A D VLIDTAGRMQDNEPLM ALAKLI VN P
Sbjct: 413 VELFERGYGKDPSAICREGLKHARANSYDAVLIDTAGRMQDNEPLMTALAKLIHVNNPHL 472
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSP---HVIDGIVLTKFDTIDDKVGAAISM 471
+LFVGEALVGN+AVDQL KFNQA+ SS IDGIVLTKFDT+DDKVGAA+SM
Sbjct: 473 LLFVGEALVGNDAVDQLRKFNQAIQKMGDSSDELRGRKIDGIVLTKFDTVDDKVGAALSM 532
Query: 472 TYITG 486
YITG
Sbjct: 533 CYITG 537
>UniRef50_Q4N567 Cluster: Signal recognition particle receptor alpha
subunit, putative; n=2; Theileria|Rep: Signal
recognition particle receptor alpha subunit, putative -
Theileria parva
Length = 579
Score = 159 bits (387), Expect = 2e-38
Identities = 78/120 (65%), Positives = 94/120 (78%)
Frame = +1
Query: 127 LYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVL 306
L+E+GYGKD A IA E I++A + + DVVLIDTAGRMQDNEPLM AL KLI VN P+ ++
Sbjct: 435 LFERGYGKDPAQIAKEGIKHAVNNQFDVVLIDTAGRMQDNEPLMAALTKLIVVNNPNLII 494
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
FVGEALVGN+AVDQL KFN A+ + ID ++LTKFDT+DDKVGAA+SM YITG
Sbjct: 495 FVGEALVGNDAVDQLKKFNLAI----GKGTDRTIDALLLTKFDTVDDKVGAALSMVYITG 550
>UniRef50_Q22T92 Cluster: SRP54-type protein, GTPase domain
containing protein; n=2; Oligohymenophorea|Rep:
SRP54-type protein, GTPase domain containing protein -
Tetrahymena thermophila SB210
Length = 618
Score = 154 bits (373), Expect = 1e-36
Identities = 71/122 (58%), Positives = 92/122 (75%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
+ ++++GY + A IA +AIR A K DV+LIDTAGRMQDNEPLM+ L+ L+ N PD
Sbjct: 468 IPVFDRGYKDEPADIAFQAIREAQAKKVDVLLIDTAGRMQDNEPLMKQLSTLVVQNNPDL 527
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
++F+GEALVGN+ DQL+KFN+AL D S ID I+L+KFDT+DDKVGAA+SMTY
Sbjct: 528 IVFIGEALVGNDGTDQLMKFNKALIDLSPKDRIREIDAIILSKFDTVDDKVGAALSMTYN 587
Query: 481 TG 486
TG
Sbjct: 588 TG 589
>UniRef50_A0E7D9 Cluster: Chromosome undetermined scaffold_81, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_81,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 585
Score = 151 bits (366), Expect = 8e-36
Identities = 72/122 (59%), Positives = 93/122 (76%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
+ +Y++GY D IA +AIR A+ K DVVL+DTAGRMQ NEPLMRAL++++ +N PD
Sbjct: 435 IPVYDRGYKDDPPEIAYQAIREATIKKIDVVLVDTAGRMQHNEPLMRALSRIVTMNNPDL 494
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
VLFVGEALVGN+ VDQLV FN+AL S + ID I+L+KFDT+D+KVGAA+S+T
Sbjct: 495 VLFVGEALVGNDGVDQLVNFNKALIVNSPKDNVREIDAIILSKFDTVDEKVGAALSLTSA 554
Query: 481 TG 486
TG
Sbjct: 555 TG 556
>UniRef50_Q4Q161 Cluster: Signal recognition particle receptor like
protein, putative; n=5; Trypanosomatidae|Rep: Signal
recognition particle receptor like protein, putative -
Leishmania major
Length = 605
Score = 149 bits (360), Expect = 4e-35
Identities = 76/123 (61%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V +++ GYG D + +A A+ AS DVV++DTAGRMQD+E MRALAKLI N+PD
Sbjct: 454 VPIFQLGYGTDPSTVAAAAMAQASKQHIDVVMVDTAGRMQDHESRMRALAKLIHDNQPDL 513
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSS-SSSPHVIDGIVLTKFDTIDDKVGAAISMTY 477
VLFVGEALVGN +DQL KFNQ L D++ S IDGIVLTKFDTIDDKVGAA+SM Y
Sbjct: 514 VLFVGEALVGNNGIDQLRKFNQCLVDFAPVGSQLRGIDGIVLTKFDTIDDKVGAALSMVY 573
Query: 478 ITG 486
G
Sbjct: 574 ELG 576
>UniRef50_UPI0000499FED Cluster: Signal recognition particle
receptor alpha subunit; n=1; Entamoeba histolytica
HM-1:IMSS|Rep: Signal recognition particle receptor
alpha subunit - Entamoeba histolytica HM-1:IMSS
Length = 488
Score = 148 bits (359), Expect = 6e-35
Identities = 70/122 (57%), Positives = 92/122 (75%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
+TLYEKGY D + IA A++ A + DV+L+DTAGRMQ N+ LM+A+AKL+ + D
Sbjct: 338 ITLYEKGYDTDPSAIARNALKRAKEDGYDVLLVDTAGRMQGNDALMKAIAKLVHSAQTDL 397
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
VLFV EALVGN+AV+QL FN+ + DY+ + ++GI+LTKFDTIDDKVGAAIS+TY
Sbjct: 398 VLFVAEALVGNDAVNQLTTFNRYIIDYAPNKQSKGVNGIILTKFDTIDDKVGAAISLTYC 457
Query: 481 TG 486
TG
Sbjct: 458 TG 459
>UniRef50_Q01F74 Cluster: SrrA undefined product; n=1; Ostreococcus
tauri|Rep: SrrA undefined product - Ostreococcus tauri
Length = 502
Score = 142 bits (344), Expect = 4e-33
Identities = 69/117 (58%), Positives = 91/117 (77%)
Frame = +1
Query: 127 LYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVL 306
LYE+GY +D + IA +AI+ A+ DVV+IDTAGRMQDNEPLMR+LAKL+ VN+PD
Sbjct: 354 LYERGYERDPSTIAQQAIQQATRQNIDVVMIDTAGRMQDNEPLMRSLAKLLNVNKPDFTF 413
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTY 477
FVG+ALVGN+ V Q+++F + L + + S VIDGI LTKFDTID+KVGAA+S+ +
Sbjct: 414 FVGDALVGNDGVSQILQFERRLQELTELSG-GVIDGIFLTKFDTIDEKVGAALSLVH 469
>UniRef50_A4RST6 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 525
Score = 142 bits (344), Expect = 4e-33
Identities = 69/117 (58%), Positives = 88/117 (75%)
Frame = +1
Query: 127 LYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVL 306
L+E+GY +D + IA +AI+ A+ DVV+IDTAGRMQDNEPLMRALAKL++VN PD L
Sbjct: 375 LFERGYERDPSVIAQQAIQQATRQGIDVVMIDTAGRMQDNEPLMRALAKLLSVNLPDLTL 434
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTY 477
FVGEALVGN+ V Q+++F L + VIDGI L+KFDTID+KVG A+S+ Y
Sbjct: 435 FVGEALVGNDGVSQILQFEHRLQALMQTEKKCVIDGIFLSKFDTIDNKVGTALSLVY 491
>UniRef50_Q7R237 Cluster: GLP_630_47100_45385; n=2; Giardia
intestinalis|Rep: GLP_630_47100_45385 - Giardia lamblia
ATCC 50803
Length = 571
Score = 129 bits (312), Expect = 3e-29
Identities = 64/119 (53%), Positives = 83/119 (69%)
Frame = +1
Query: 124 TLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTV 303
TLY +GYGK+A+ IA I+ A D+ LIDT GR +N PLM+AL L+ N PD V
Sbjct: 424 TLYSQGYGKNASAIAKYGIKEAESLNYDICLIDTTGRQYNNGPLMQALGALVLENAPDVV 483
Query: 304 LFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
LFVGEAL GNE V+QL +F+ AL Y++S IDGI+LTKFDT DKVGAA+++ ++
Sbjct: 484 LFVGEALTGNEGVEQLKQFDCALKSYTNSRG---IDGIILTKFDTCGDKVGAALNLCFV 539
>UniRef50_A2EHQ0 Cluster: SRP54-type protein, putative; n=1;
Trichomonas vaginalis G3|Rep: SRP54-type protein,
putative - Trichomonas vaginalis G3
Length = 533
Score = 126 bits (304), Expect = 3e-28
Identities = 64/123 (52%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Frame = +1
Query: 121 VTLYEKGYGK-DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPD 297
+ L+++G + D +A +AI+YA D K DVVL+DTAGRMQ++E LM+ +A+LI +PD
Sbjct: 380 IELFQRGNDRRDPVPVAKDAIQYAIDKKIDVVLVDTAGRMQNSEGLMKQIARLINEVKPD 439
Query: 298 TVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTY 477
LFV EALVG DQ+ F+ L Y+ IDGIVLTKFDTIDDKVGAA+++ Y
Sbjct: 440 LSLFVAEALVGGNGSDQISSFDMNLKRYAGVKDAKGIDGIVLTKFDTIDDKVGAALTLVY 499
Query: 478 ITG 486
TG
Sbjct: 500 ETG 502
>UniRef50_Q8SR80 Cluster: SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA
SUBUNIT; n=1; Encephalitozoon cuniculi|Rep: SIGNAL
RECOGNITION PARTICLE RECEPTOR ALPHA SUBUNIT -
Encephalitozoon cuniculi
Length = 425
Score = 120 bits (290), Expect = 1e-26
Identities = 57/120 (47%), Positives = 84/120 (70%)
Frame = +1
Query: 118 MVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPD 297
+V YEKGYGKD A +A AI+ A DV+LIDTAGRM + + LM +L KL+ +N PD
Sbjct: 276 LVGFYEKGYGKDDASVARCAIQEAQHEGYDVILIDTAGRMHNKKNLMASLTKLMKINRPD 335
Query: 298 TVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTY 477
+++VGEALVG++++D + +FN+A+ D S ID I+LTK DT+DD++G ++M +
Sbjct: 336 HIIYVGEALVGSDSLDHIREFNKAIRDADQSRK---IDSILLTKVDTVDDRIGQILNMAF 392
>UniRef50_Q2U958 Cluster: Signal recognition particle receptor; n=2;
Aspergillus|Rep: Signal recognition particle receptor -
Aspergillus oryzae
Length = 607
Score = 115 bits (276), Expect = 7e-25
Identities = 64/149 (42%), Positives = 84/149 (56%)
Frame = +1
Query: 40 GTREQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 219
G EQLR H R V LYEKGYGKDAA +A +A+ Y + K DVVLI
Sbjct: 439 GAVEQLRVHARNLKELSARENVG---QVELYEKGYGKDAANVAKDAVEYGAANKFDVVLI 495
Query: 220 DTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSP 399
DTAGR +++ LM +L K +PD + VGEALVG ++V Q FNQA +
Sbjct: 496 DTAGRRHNDQRLMSSLEKFGKFAKPDKIFMVGEALVGTDSVMQARNFNQAF------GTG 549
Query: 400 HVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+DG +++K DT+ D VG +SM + TG
Sbjct: 550 RNLDGFIISKCDTVGDMVGTLVSMVHATG 578
>UniRef50_A1CMF5 Cluster: Signal sequence receptor alpha subunit,
putative; n=16; Pezizomycotina|Rep: Signal sequence
receptor alpha subunit, putative - Aspergillus clavatus
Length = 654
Score = 113 bits (272), Expect = 2e-24
Identities = 63/149 (42%), Positives = 83/149 (55%)
Frame = +1
Query: 40 GTREQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLI 219
G EQLR H R V LYEKGYGKDAA +A +A+ Y + DVVLI
Sbjct: 486 GAVEQLRVHARNLKELSARETAGE---VELYEKGYGKDAANVAKDAVEYGAANDFDVVLI 542
Query: 220 DTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSP 399
DTAGR +++ LM +L K +PD + VGEALVG ++V Q FNQA +
Sbjct: 543 DTAGRRHNDQRLMSSLEKFAKFAKPDKIFMVGEALVGTDSVMQARNFNQAF------GTG 596
Query: 400 HVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+DG +++K DT+ D VG +SM + TG
Sbjct: 597 RNLDGFIISKCDTVGDMVGTLVSMVHATG 625
>UniRef50_Q8U051 Cluster: Signal recognition particle receptor; n=5;
Euryarchaeota|Rep: Signal recognition particle receptor
- Pyrococcus furiosus
Length = 322
Score = 93.9 bits (223), Expect = 2e-18
Identities = 52/120 (43%), Positives = 75/120 (62%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V + + YG D A +A +AI++A DVVLIDTAGR + N LM + K+ V +P+
Sbjct: 179 VKVIKHSYGADPAAVAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVTKPNL 238
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
V+FVG+AL GN V+Q +FN+A+ IDGI+LTK D D + GAA+S++Y+
Sbjct: 239 VIFVGDALAGNAIVEQARQFNEAVK----------IDGIILTKLDA-DARGGAALSISYV 287
>UniRef50_Q8PYQ0 Cluster: Signal recognition particle subunit
Ffh/SRP54; n=9; Euryarchaeota|Rep: Signal recognition
particle subunit Ffh/SRP54 - Methanosarcina mazei
(Methanosarcina frisia)
Length = 419
Score = 91.5 bits (217), Expect = 9e-18
Identities = 51/114 (44%), Positives = 68/114 (59%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEAL 324
G D A + +A++YA D VL DTAGRM N LM + K+ V+ PD ++FV EA+
Sbjct: 286 GADPAAVIYDAVQYAKAHNIDFVLSDTAGRMHTNMNLMAQMEKICRVSSPDLIIFVDEAV 345
Query: 325 VGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
GN+AV++ +FN A+ IDG +LTK D D K GAAIS+ YITG
Sbjct: 346 AGNDAVERAAQFNDAVP----------IDGSILTKIDA-DAKGGAAISIAYITG 388
>UniRef50_A5UL28 Cluster: Signal recognition particle GTPase SRP54;
n=1; Methanobrevibacter smithii ATCC 35061|Rep: Signal
recognition particle GTPase SRP54 - Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861)
Length = 470
Score = 91.5 bits (217), Expect = 9e-18
Identities = 51/120 (42%), Positives = 73/120 (60%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V L + G D A +A +A+ +A ++VLIDTAGRMQ N LM + K+ V +PD
Sbjct: 320 VKLIKHQKGSDPAAVAFDAVEHAKAQGKELVLIDTAGRMQTNTNLMDEMKKIKRVAKPDL 379
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
V+FVG+AL GN+A Q KFN+A+ +DG++LTK D D K GA++S+ Y+
Sbjct: 380 VVFVGDALTGNDATQQASKFNEAID----------LDGVILTKADA-DSKGGASLSIGYV 428
>UniRef50_A3LNS4 Cluster: GTP binding signal recognition particle
receptor; n=6; Saccharomycetales|Rep: GTP binding signal
recognition particle receptor - Pichia stipitis (Yeast)
Length = 545
Score = 89.8 bits (213), Expect = 3e-17
Identities = 54/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Frame = +1
Query: 40 GTREQLRTHTRXXXXXXXXXXXXXXXMVTLYEKGYGKD--AAGIAMEAIRYASDTKTDVV 213
G EQL+ H + ++EKGYG A AI++A+ K D+V
Sbjct: 373 GAVEQLKVHVNNLQRLNSQSSNGENK-IDIFEKGYGSGDHVVTTAKMAIQHAASEKFDIV 431
Query: 214 LIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSS 393
LIDTAGR N LM L K PD ++ VGEALVG ++V+Q + FN A + S
Sbjct: 432 LIDTAGRTHSNTKLMAPLKKFGDAANPDKIIMVGEALVGTDSVEQAINFNNAFGNKRS-- 489
Query: 394 SPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
+D +++K DT+ D VG I+M T
Sbjct: 490 ----LDFFIISKVDTVGDLVGTMINMVMAT 515
>UniRef50_Q57739 Cluster: Probable signal recognition particle
protein MJ0291; n=7; Euryarchaeota|Rep: Probable signal
recognition particle protein MJ0291 - Methanococcus
jannaschii
Length = 409
Score = 89.8 bits (213), Expect = 3e-17
Identities = 52/114 (45%), Positives = 70/114 (61%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEAL 324
G D+A + +AI++A DVVL DTAGR N LM + K++ V +PD V+FVG+AL
Sbjct: 266 GADSAAVIYDAIQHAKARGIDVVLADTAGRQATNVNLMEEIKKVVRVTKPDLVIFVGDAL 325
Query: 325 VGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
GN+AV Q +FN+A+ IDGI+LTK D D K GAA+S+ Y G
Sbjct: 326 TGNDAVYQAEEFNRAVN----------IDGIILTKVDA-DAKGGAALSIGYAIG 368
>UniRef50_Q9Y7B0 Cluster: Signal sequence receptor alpha subunit;
n=1; Yarrowia lipolytica|Rep: Signal sequence receptor
alpha subunit - Yarrowia lipolytica (Candida lipolytica)
Length = 557
Score = 89.0 bits (211), Expect = 5e-17
Identities = 48/121 (39%), Positives = 68/121 (56%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V L+ +GYGKD A A +A+ Y DVVLIDTAGR ++ LM L K P+
Sbjct: 413 VELFAQGYGKDPAHTAEKAVEYGEKHGFDVVLIDTAGRRHSDKRLMGDLEKFAKRARPNK 472
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
++ VGEALVG ++V Q FN A +D +++K DT+ D +G+ ++MTY
Sbjct: 473 IIMVGEALVGTDSVQQARNFNDAF------GKDRNLDFFLISKCDTVGDMIGSIVNMTYA 526
Query: 481 T 483
T
Sbjct: 527 T 527
>UniRef50_A7DRN3 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: Signal recognition particle-docking protein
FtsY - Candidatus Nitrosopumilus maritimus SCM1
Length = 513
Score = 85.8 bits (203), Expect = 5e-16
Identities = 50/119 (42%), Positives = 73/119 (61%)
Frame = +1
Query: 127 LYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVL 306
L + Y D A +A +A+ YA KTDVVLIDTAGRMQ +E LM+ + K+ V PD +
Sbjct: 163 LVAQNYNSDPAAVARDAVLYAKSHKTDVVLIDTAGRMQTSENLMQQIEKITKVVNPDLKI 222
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
FVG++L GN+ V+Q +F+ + ++ H G +LTK D D + GAA+S+ +T
Sbjct: 223 FVGDSLAGNDTVNQAREFH-------AHTNFH---GSILTKSDA-DARGGAALSIVKVT 270
>UniRef50_P32916 Cluster: Signal recognition particle receptor
subunit alpha homolog; n=6; Saccharomycetales|Rep:
Signal recognition particle receptor subunit alpha
homolog - Saccharomyces cerevisiae (Baker's yeast)
Length = 621
Score = 85.4 bits (202), Expect = 6e-16
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = +1
Query: 121 VTLYEKGYGKD--AAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEP 294
V L+E GYG IA +AI+Y+ D D+VL+DTAGR ++ LM L +P
Sbjct: 475 VELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKP 534
Query: 295 DTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMT 474
D ++ VGEALVG ++V Q FN A + +D +++K DT+ + +G ++M
Sbjct: 535 DKIIMVGEALVGTDSVQQAKNFNDAFGKGRN------LDFFIISKCDTVGEMLGTMVNMV 588
Query: 475 YITG 486
Y TG
Sbjct: 589 YATG 592
>UniRef50_A1RXA8 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Thermofilum pendens Hrk 5|Rep: Signal
recognition particle-docking protein FtsY - Thermofilum
pendens (strain Hrk 5)
Length = 302
Score = 83.4 bits (197), Expect = 2e-15
Identities = 49/115 (42%), Positives = 65/115 (56%)
Frame = +1
Query: 139 GYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGE 318
GY D A +A EA++ VVLIDTAGRM + LM + K+ V PD +FVG+
Sbjct: 169 GYNADPAAVAYEAVKKGEKGDFQVVLIDTAGRMHTKKNLMDEMKKIARVASPDFKVFVGD 228
Query: 319 ALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
ALVGN+AV+Q F + DG +LTKFD D + GAA+S+ Y+T
Sbjct: 229 ALVGNDAVEQAKTFFSEVG----------FDGSILTKFDA-DIRGGAALSVVYVT 272
>UniRef50_O43032 Cluster: Signal recognition particle receptor alpha
subunit Srp101; n=1; Schizosaccharomyces pombe|Rep:
Signal recognition particle receptor alpha subunit
Srp101 - Schizosaccharomyces pombe (Fission yeast)
Length = 547
Score = 81.4 bits (192), Expect = 1e-14
Identities = 41/119 (34%), Positives = 65/119 (54%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
+ L+ +GYGKD++ + A+ YA DV+LIDTAGR +++ LM +L K + D
Sbjct: 404 IELFAQGYGKDSSFVVKNAVEYAKQNSFDVILIDTAGRRHNDQRLMGSLEKFTKATKLDK 463
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTY 477
+ V EALVG +++ Q F +L +DG +++K DT+ VG + M Y
Sbjct: 464 IFQVAEALVGTDSLAQAKHFQASLYH-------RPLDGFIISKVDTVGQLVGVMVGMVY 515
>UniRef50_UPI00015BB111 Cluster: signal recognition particle-docking
protein FtsY; n=1; Ignicoccus hospitalis KIN4/I|Rep:
signal recognition particle-docking protein FtsY -
Ignicoccus hospitalis KIN4/I
Length = 340
Score = 79.4 bits (187), Expect = 4e-14
Identities = 49/117 (41%), Positives = 67/117 (57%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V + K YG D A +A +AI YA +VVLIDTAGRM + LM L K+ V EPD
Sbjct: 198 VPIITKPYGSDPASVAYDAIEYAKARGFNVVLIDTAGRMHVDVDLMNELRKVARVAEPDY 257
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISM 471
+ V +AL GN+AV+Q F++A+ +D ++LTK D D K GA +S+
Sbjct: 258 KVLVLDALTGNDAVEQAKFFDEAVG----------VDAVILTKVDA-DAKGGAVLSV 303
>UniRef50_A0RUF0 Cluster: Signal recognition particle GTPase; n=1;
Cenarchaeum symbiosum|Rep: Signal recognition particle
GTPase - Cenarchaeum symbiosum
Length = 422
Score = 79.0 bits (186), Expect = 5e-14
Identities = 45/116 (38%), Positives = 68/116 (58%)
Frame = +1
Query: 136 KGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVG 315
+ YG D A +A +A+ YA D VL+DTAGRMQ ++ LM + K+I V +PD +FVG
Sbjct: 136 QNYGSDPAAVARDAVLYARSHGVDCVLVDTAGRMQTSKNLMEQIEKIIRVVQPDLKIFVG 195
Query: 316 EALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
++L GN+ V+Q +F++ + D +LTK D D + GAA+S+ T
Sbjct: 196 DSLAGNDTVNQAGEFHEHIK----------FDCSILTKNDA-DARGGAALSIVKTT 240
>UniRef50_Q5UY25 Cluster: Signal recognition particle receptor; n=8;
Halobacteriaceae|Rep: Signal recognition particle
receptor - Haloarcula marismortui (Halobacterium
marismortui)
Length = 429
Score = 77.8 bits (183), Expect = 1e-13
Identities = 46/114 (40%), Positives = 64/114 (56%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEAL 324
G D + +A+ YA DVVL DTAGR+ ++ LM L K+ +PD LFV EA+
Sbjct: 297 GSDPTAVVYDAVEYAKANDIDVVLGDTAGRLHTSDDLMAQLEKIDRNIDPDMTLFVDEAV 356
Query: 325 VGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
G +AV++ +FN A IDG +LTK D D + GAAIS+ ++TG
Sbjct: 357 AGQDAVNRAREFNDAAE----------IDGAILTKADA-DPQGGAAISVAHVTG 399
>UniRef50_A3CWZ1 Cluster: Signal recognition particle-docking
protein FtsY; n=3; Euryarchaeota|Rep: Signal recognition
particle-docking protein FtsY - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 354
Score = 77.0 bits (181), Expect = 2e-13
Identities = 46/114 (40%), Positives = 66/114 (57%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEAL 324
G D + + +A++YA DVVL DTAGR + LM L K+ V +PD V++V EA+
Sbjct: 220 GADPSAVLFDAVQYAKAHDIDVVLADTAGRFHNRANLMNQLDKIRRVMKPDLVVYVDEAV 279
Query: 325 VGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
GN+AV + +FN+A+ D +VLTK D +D K GAAIS+ + G
Sbjct: 280 AGNDAVIRADEFNKAVG----------TDAVVLTKAD-MDPKGGAAISVAHTVG 322
>UniRef50_A3DNH8 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Staphylothermus marinus F1|Rep:
Signal recognition particle-docking protein FtsY -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 295
Score = 76.2 bits (179), Expect = 4e-13
Identities = 44/112 (39%), Positives = 66/112 (58%)
Frame = +1
Query: 142 YGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEA 321
YG D A IA +AIR+A DVVLIDTAGRM + L+ L K+I V +P + V +A
Sbjct: 161 YGADPASIAFDAIRHAETRGYDVVLIDTAGRMHTDSNLVDELRKIIRVAKPHRKILVVDA 220
Query: 322 LVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTY 477
L GN+A++Q V F++A+ +D +++TK D ++ G +S+ Y
Sbjct: 221 LTGNDAIEQAVFFDKAVG----------VDAVIVTKVDAY-EQGGVPLSIVY 261
>UniRef50_A4XLF5 Cluster: Signal recognition particle protein; n=2;
Bacteria|Rep: Signal recognition particle protein -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 443
Score = 75.8 bits (178), Expect = 5e-13
Identities = 45/122 (36%), Positives = 67/122 (54%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V+ Y KDA IA+E + +A + D+ ++DTAGR+ NE LM L + + +P
Sbjct: 156 VSCYADYDKKDAVKIAVEGVNFAKSNRFDIAIVDTAGRLHINEELMNELVAIKSAIKPTE 215
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
+L V +A+ G +AV+ FN L IDGI++TK D D + GAA+S+ I
Sbjct: 216 ILLVLDAMTGQDAVNVAEAFNNQLG----------IDGIIMTKLDG-DTRGGAALSVKAI 264
Query: 481 TG 486
TG
Sbjct: 265 TG 266
>UniRef50_Q2FS95 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Methanospirillum hungatei JF-1|Rep:
Signal recognition particle-docking protein FtsY -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 353
Score = 75.4 bits (177), Expect = 6e-13
Identities = 45/114 (39%), Positives = 64/114 (56%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEAL 324
G D + + + YA K DVVL DTAGR + LM LAK+ V PD +++V EA+
Sbjct: 220 GSDPTAVLFDTVEYARAHKIDVVLGDTAGRFHNRANLMNQLAKIRRVINPDLIVYVDEAV 279
Query: 325 VGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
GN+AV + +F +++ +D I+LTK D +D K GAAIS+ Y G
Sbjct: 280 AGNDAVIRAEEFAKSVG----------MDAIMLTKVD-MDPKGGAAISVAYAVG 322
>UniRef50_Q6KYV1 Cluster: Signal recognition particle receptor FtsY;
n=4; Thermoplasmatales|Rep: Signal recognition particle
receptor FtsY - Picrophilus torridus
Length = 315
Score = 74.9 bits (176), Expect = 9e-13
Identities = 43/110 (39%), Positives = 63/110 (57%)
Frame = +1
Query: 142 YGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEA 321
+G D A +A +AI +A + D VLID+AGRMQ N+ L+ + K+ V PD L V +
Sbjct: 182 FGSDPASVAYDAIEHARARRIDYVLIDSAGRMQTNKNLLSEMKKIKRVARPDLTLLVLDG 241
Query: 322 LVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISM 471
++GN+A++Q F + DG+VLTK DT D + GA IS+
Sbjct: 242 MIGNDAIEQAKTFMNEIN----------FDGVVLTKLDT-DARGGAVISV 280
>UniRef50_A2BN60 Cluster: Signal recognition particle GTPase; n=2;
Desulfurococcales|Rep: Signal recognition particle
GTPase - Hyperthermus butylicus (strain DSM 5456 / JCM
9403)
Length = 312
Score = 74.1 bits (174), Expect = 1e-12
Identities = 47/115 (40%), Positives = 63/115 (54%)
Frame = +1
Query: 142 YGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEA 321
YG D A + +AI YA V+L DTAGRM + LM L K+ V +PD V +A
Sbjct: 174 YGADPASVVYDAIEYARARGYRVILADTAGRMHTDRDLMEELRKITRVAKPDYRALVVDA 233
Query: 322 LVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
L GN+AV+Q F++A+ ID I+LTK D D K G A+S+ +TG
Sbjct: 234 LTGNDAVEQARFFDEAVG----------IDFIILTKVDA-DVKGGTALSVAAVTG 277
>UniRef50_Q54431 Cluster: Signal recognition particle protein; n=76;
Firmicutes|Rep: Signal recognition particle protein -
Streptococcus mutans
Length = 516
Score = 72.5 bits (170), Expect = 5e-12
Identities = 43/122 (35%), Positives = 68/122 (55%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V +++ G A I + + A + + D VLIDTAGR+Q +E LM L + A+ P+
Sbjct: 158 VPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNE 217
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
+L V ++++G EA + +FNQ L + G++LTK D D + GAA+S+ I
Sbjct: 218 ILLVVDSMIGQEAANVAREFNQQLE----------VTGVILTKIDG-DTRGGAALSVRQI 266
Query: 481 TG 486
TG
Sbjct: 267 TG 268
>UniRef50_P27414 Cluster: Probable signal recognition particle
protein; n=8; Sulfolobaceae|Rep: Probable signal
recognition particle protein - Sulfolobus acidocaldarius
Length = 369
Score = 70.1 bits (164), Expect = 2e-11
Identities = 41/119 (34%), Positives = 64/119 (53%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V L YG D A +A +AI +A DVVLIDTAGRM + L+ L +++ + +PD
Sbjct: 229 VQLIRGKYGADPASVAFDAISFAKSRNIDVVLIDTAGRMHIDSDLVEELKRVLRIAKPDF 288
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTY 477
+ + ++L G++A++Q F + D ++LTK D D K G A+S+ Y
Sbjct: 289 RILILDSLAGSDALEQARHFENNVG----------YDAVILTKVDA-DAKGGIALSLAY 336
>UniRef50_A6Q553 Cluster: Signal recognition particle protein; n=12;
Epsilonproteobacteria|Rep: Signal recognition particle
protein - Nitratiruptor sp. (strain SB155-2)
Length = 452
Score = 69.7 bits (163), Expect = 3e-11
Identities = 41/113 (36%), Positives = 62/113 (54%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALV 327
KD + +A++ A + DVV+IDTAGR+ +E LM L K+ PD V +V ++L
Sbjct: 160 KDPVKVVNDALKLAREKLYDVVIIDTAGRLAIDEALMEELKKVKEAAHPDEVFYVADSLT 219
Query: 328 GNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
G +AV KFN+ + I G++LTK+D D K G A+S+ + G
Sbjct: 220 GQDAVRSAAKFNEDVG----------ITGVILTKYDG-DAKGGVALSLAHQIG 261
>UniRef50_Q01442 Cluster: Signal recognition particle protein; n=15;
Bacteria|Rep: Signal recognition particle protein -
Mycoplasma mycoides
Length = 447
Score = 66.5 bits (155), Expect = 3e-10
Identities = 40/119 (33%), Positives = 67/119 (56%)
Frame = +1
Query: 127 LYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVL 306
++EKG +D A +A+ YA + DVV++DTAGR+Q ++ LM+ L L P+ +L
Sbjct: 160 VFEKGK-QDPVKTAEQALEYAKENNFDVVILDTAGRLQVDQVLMKELDNLKKKTSPNEIL 218
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
V + + G E ++ +FN L + G+V+TK D D + GA +S++Y+T
Sbjct: 219 LVVDGMSGQEIINVTNEFNDKLK----------LSGVVVTKLDG-DARGGATLSISYLT 266
>UniRef50_P56005 Cluster: Signal recognition particle protein; n=13;
Campylobacterales|Rep: Signal recognition particle
protein - Helicobacter pylori (Campylobacter pylori)
Length = 448
Score = 64.9 bits (151), Expect = 9e-10
Identities = 38/113 (33%), Positives = 63/113 (55%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALV 327
K IA A++ A + + DV+L+D+AGR+ ++ LM+ L ++ + P VL+V +AL
Sbjct: 158 KSVKEIASNALKRAKEAQFDVLLVDSAGRLAIDKELMQELKEVKEILNPHEVLYVADALS 217
Query: 328 GNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
G + V FN+ + + G+VL+KFD+ D K G A+ +TY G
Sbjct: 218 GQDGVKSANTFNEEIG----------VSGVVLSKFDS-DSKGGIALGITYQLG 259
>UniRef50_O07347 Cluster: Signal recognition particle protein; n=15;
Bacteria|Rep: Signal recognition particle protein -
Thermus aquaticus
Length = 430
Score = 64.5 bits (150), Expect = 1e-09
Identities = 39/94 (41%), Positives = 57/94 (60%)
Frame = +1
Query: 205 DVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYS 384
D++L+DTAGR+Q +EPLM LA+L V PD VL V +A+ G EA+ F++ +
Sbjct: 182 DLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDEKVG--- 238
Query: 385 SSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+ G+VLTK D D + GAA+S ++TG
Sbjct: 239 -------VTGLVLTKLDG-DARGGAALSARHVTG 264
>UniRef50_A1RMB9 Cluster: Signal recognition particle protein; n=21;
Bacteria|Rep: Signal recognition particle protein -
Shewanella sp. (strain W3-18-1)
Length = 457
Score = 63.7 bits (148), Expect = 2e-09
Identities = 42/108 (38%), Positives = 61/108 (56%)
Frame = +1
Query: 163 IAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAV 342
IA AI +A DVV+IDTAGR+ +E +M + L A +P LFV +A+ G +A
Sbjct: 171 IAKAAIAHAKLKFIDVVIIDTAGRLHVDEAMMDEIKALHAAVKPIETLFVVDAMTGQDAA 230
Query: 343 DQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+ FN+AL + G++LTK D D + GAA+S+ +ITG
Sbjct: 231 NTAKAFNEALP----------LTGVILTKVDG-DARGGAALSIRHITG 267
>UniRef50_Q8ZTT8 Cluster: Signal recognition particle protein
(Docking protein), probable; n=5; Thermoproteaceae|Rep:
Signal recognition particle protein (Docking protein),
probable - Pyrobaculum aerophilum
Length = 305
Score = 63.7 bits (148), Expect = 2e-09
Identities = 42/113 (37%), Positives = 61/113 (53%)
Frame = +1
Query: 142 YGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEA 321
YG D A +A +A+++A VLIDTAGRM + LM L K+ V EP +FV +A
Sbjct: 173 YGADPASVAYDALQHAKARGYHFVLIDTAGRMHTDANLMEELRKIQRVTEPHYSIFVFDA 232
Query: 322 LVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
+GNEA++ +A Y S IDG++ TK D K G+ ++ Y+
Sbjct: 233 QLGNEALE--------IAKYYSKYVK--IDGMIATKVDAY-PKGGSILTFIYV 274
>UniRef50_P74214 Cluster: Signal recognition particle protein; n=38;
Cyanobacteria|Rep: Signal recognition particle protein -
Synechocystis sp. (strain PCC 6803)
Length = 482
Score = 63.7 bits (148), Expect = 2e-09
Identities = 41/122 (33%), Positives = 65/122 (53%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V +++ G + IA + + A + D VLIDTAGR+Q + +M LA++ V +PD
Sbjct: 156 VPVFDLGSDANPVEIARQGVEKAKELGVDTVLIDTAGRLQIDPQMMAELAEIKQVVKPDD 215
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
L V +A+ G EA + F++ + I G +LTK D D + GAA+S+ I
Sbjct: 216 TLLVVDAMTGQEAANLTHTFHEQIG----------ITGAILTKLDG-DTRGGAALSVRQI 264
Query: 481 TG 486
+G
Sbjct: 265 SG 266
>UniRef50_O67615 Cluster: Signal recognition particle protein; n=3;
Bacteria|Rep: Signal recognition particle protein -
Aquifex aeolicus
Length = 454
Score = 63.7 bits (148), Expect = 2e-09
Identities = 39/122 (31%), Positives = 64/122 (52%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V YE G A IA A++ A + D +L+DTAGR+ +E LM+ L ++ V P
Sbjct: 151 VPYYEFEEGLGAVEIARRAVKRAKEESVDYLLLDTAGRLHVDEELMKELQEIKEVTNPSE 210
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
+L+V +A+ G A++ F++ L + G+V+TK D D + G A+S+ +
Sbjct: 211 ILYVADAMQGQTALETAKTFHERLG----------LTGVVITKMDG-DARGGLALSVKEV 259
Query: 481 TG 486
G
Sbjct: 260 LG 261
>UniRef50_Q6MDH1 Cluster: Probable signal recognition particle chain
ffh; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Probable signal recognition particle chain
ffh - Protochlamydia amoebophila (strain UWE25)
Length = 454
Score = 63.3 bits (147), Expect = 3e-09
Identities = 37/113 (32%), Positives = 63/113 (55%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALV 327
KD IA +A+++A + + D++++DTAGR+ + LM L K+ V P +LFV A
Sbjct: 178 KDPVRIAKDALKHAQEAQHDLLIVDTAGRLHVDNELMTQLEKIKEVLNPGEILFVANATT 237
Query: 328 GNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
G +AV+ +F++ + + G +LT D + + GAAIS+ +TG
Sbjct: 238 GQDAVNVATEFSKRIE----------VSGTILTMLDG-NARGGAAISIREVTG 279
>UniRef50_A6BZ37 Cluster: Signal recognition particle protein; n=1;
Planctomyces maris DSM 8797|Rep: Signal recognition
particle protein - Planctomyces maris DSM 8797
Length = 492
Score = 62.9 bits (146), Expect = 4e-09
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDT-KTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEA 321
G +A + + A D V++DTAGR+ + LM+ L ++ +PD V+F +A
Sbjct: 165 GNNAVKVCQNGLNQAKKLGNVDTVILDTAGRLHVDADLMKELEQIERKLQPDQVIFACDA 224
Query: 322 LVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+ G +AV+ FN AL +DG++LTK D D + GAA+S+ +TG
Sbjct: 225 MTGQDAVNSAKAFNDALE----------LDGVILTKLDG-DTRGGAALSVKEVTG 268
>UniRef50_A4RQK2 Cluster: IISP family transporter: signal
recognition particle protein; n=2; Ostreococcus|Rep:
IISP family transporter: signal recognition particle
protein - Ostreococcus lucimarinus CCE9901
Length = 498
Score = 62.9 bits (146), Expect = 4e-09
Identities = 41/122 (33%), Positives = 60/122 (49%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V +++ G + IA +R A D DVV++DTAGR+ +E LM L D
Sbjct: 163 VPVFDMGVDGNPPEIAARGVRKAKDEDIDVVIVDTAGRLNIDEKLMGELKATKEATSADE 222
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
L V +A+ G EA FN+A+ I G +LTK D D + GAA+S+ +
Sbjct: 223 TLLVVDAMTGQEAATLTASFNEAVE----------ITGAILTKMDG-DTRGGAALSVREV 271
Query: 481 TG 486
+G
Sbjct: 272 SG 273
>UniRef50_A6DB28 Cluster: Signal recognition particle protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Signal recognition
particle protein - Caminibacter mediatlanticus TB-2
Length = 449
Score = 62.1 bits (144), Expect = 6e-09
Identities = 37/113 (32%), Positives = 63/113 (55%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALV 327
K+A +A + + A + DVVLIDTAGR+ +E LM L ++ +P+ + +V ++L
Sbjct: 160 KNAVEVAKKGVEEAKNKFYDVVLIDTAGRLAIDEALMNELIEMKKEVDPNEIFYVADSLT 219
Query: 328 GNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
G +A++ F++ L I G++LTK+D D K G A+S+ + G
Sbjct: 220 GKDAINTAKAFDEKLD----------ITGVILTKYDG-DSKGGVALSIAHQVG 261
>UniRef50_Q895M4 Cluster: Signal recognition particle, subunit
ffh/srp54; n=18; Bacteria|Rep: Signal recognition
particle, subunit ffh/srp54 - Clostridium tetani
Length = 451
Score = 61.7 bits (143), Expect = 9e-09
Identities = 39/122 (31%), Positives = 66/122 (54%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V ++ G + I+ AI++A + + ++IDTAGR+ +E LM L + EP+
Sbjct: 157 VPVFTLGDKTNPVDISKAAIKHAKENNLNTIIIDTAGRLHIDENLMDELKSIKENIEPNE 216
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
VL V +++ G +A++ FN+ L I G++LTK D D + GAA+S+ +
Sbjct: 217 VLLVVDSMTGQDAINVAESFNEKLN----------ISGVILTKLDG-DTRGGAALSIKAM 265
Query: 481 TG 486
TG
Sbjct: 266 TG 267
>UniRef50_Q5QUU7 Cluster: Signal recognition particle GTPase; n=4;
Proteobacteria|Rep: Signal recognition particle GTPase -
Idiomarina loihiensis
Length = 454
Score = 60.9 bits (141), Expect = 1e-08
Identities = 40/108 (37%), Positives = 61/108 (56%)
Frame = +1
Query: 163 IAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAV 342
IA AI A DVVL+DTAGR+ +E +M+ + +L + P LFV +A+ G +A
Sbjct: 171 IANAAIAQARKQFIDVVLVDTAGRLAIDEDMMQEIQQLHSAINPVETLFVVDAMTGQDAA 230
Query: 343 DQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+ F++AL + G++LTK D D + GAA+S+ +ITG
Sbjct: 231 NTAKAFSEALP----------LTGVILTKTDG-DARGGAALSIRHITG 267
>UniRef50_A7DS34 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Candidatus Nitrosopumilus
maritimus SCM1|Rep: GTP-binding signal recognition
particle SRP54, G-domain - Candidatus Nitrosopumilus
maritimus SCM1
Length = 442
Score = 60.9 bits (141), Expect = 1e-08
Identities = 34/122 (27%), Positives = 62/122 (50%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V +Y + KD+ I + Y D DV+LIDTAGR ++ + L+ + ++ V +PD
Sbjct: 155 VEVYGEESNKDSPSIVKNGLNYFKDQSLDVILIDTAGRHKEEQDLLEEMDRINKVADPDL 214
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
L V + +G + +Q F++ + + G+++TK D+ K G A++ +
Sbjct: 215 ALLVIDGTIGQQCFNQAEAFHKTIP----------VGGVIITKLDS-SAKGGGALAASAA 263
Query: 481 TG 486
TG
Sbjct: 264 TG 265
>UniRef50_P0AGD9 Cluster: Signal recognition particle protein;
n=128; Bacteria|Rep: Signal recognition particle protein
- Escherichia coli O157:H7
Length = 453
Score = 60.9 bits (141), Expect = 1e-08
Identities = 41/122 (33%), Positives = 64/122 (52%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V + G+ I A++ A DV+L+DTAGR+ +E +M + ++ A P
Sbjct: 157 VDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVE 216
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
LFV +A+ G +A + FN+AL + G+VLTK D D + GAA+S+ +I
Sbjct: 217 TLFVVDAMTGQDAANTAKAFNEALP----------LTGVVLTKVDG-DARGGAALSIRHI 265
Query: 481 TG 486
TG
Sbjct: 266 TG 267
>UniRef50_Q8KD87 Cluster: Signal recognition particle protein; n=18;
Bacteroidetes/Chlorobi group|Rep: Signal recognition
particle protein - Chlorobium tepidum
Length = 449
Score = 60.5 bits (140), Expect = 2e-08
Identities = 41/111 (36%), Positives = 61/111 (54%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALV 327
+DA A+ + A DVV++DTAGR+Q +E +M L PD +LFV ++++
Sbjct: 165 QDAMKAALGGLEAAKAGAKDVVIVDTAGRLQIDEAMMAEAEALKNRLSPDELLFVVDSMM 224
Query: 328 GNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
G EAV+ FN L D+ DG+VLTK D D + GAA+S+ +
Sbjct: 225 GQEAVNTAKAFNDRL-DF---------DGVVLTKLDG-DARGGAALSIRQV 264
>UniRef50_A7CS33 Cluster: Signal recognition particle protein; n=1;
Opitutaceae bacterium TAV2|Rep: Signal recognition
particle protein - Opitutaceae bacterium TAV2
Length = 478
Score = 60.5 bits (140), Expect = 2e-08
Identities = 39/119 (32%), Positives = 59/119 (49%)
Frame = +1
Query: 130 YEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLF 309
Y KD I + A D + DTAGR+Q ++ L+ + KL A +PD V
Sbjct: 184 YSDRVSKDVPAIGAAGLEAARAAGADAIFFDTAGRLQIDQDLIEEVKKLRARIQPDEVFL 243
Query: 310 VGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
V + +G EAV+ F++A+ + G++LTK D D + GAA+S+ ITG
Sbjct: 244 VADGALGQEAVNVAKAFHEAVQ----------LTGLILTKLDG-DARGGAALSIKSITG 291
>UniRef50_A6DNU8 Cluster: Signal recognition particle; n=1;
Lentisphaera araneosa HTCC2155|Rep: Signal recognition
particle - Lentisphaera araneosa HTCC2155
Length = 469
Score = 60.5 bits (140), Expect = 2e-08
Identities = 40/112 (35%), Positives = 59/112 (52%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D IA A+ A D+V++D AGR+Q +E +++ L ++ P +L ++ +G
Sbjct: 165 DVVQIAQNAMNTAKSEGHDLVILDMAGRLQIDEDMVQELIRVKERFNPGEILLTADSALG 224
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
EAV F+QAL I GIVLTK D D + GAA+SM +TG
Sbjct: 225 QEAVSVATHFDQALN----------ISGIVLTKLDG-DARGGAALSMRKVTG 265
>UniRef50_A4E6S7 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 461
Score = 60.5 bits (140), Expect = 2e-08
Identities = 39/117 (33%), Positives = 64/117 (54%)
Frame = +1
Query: 136 KGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVG 315
+G G IA AI+ A D DVV++DTAGR+Q +E +M+ + +PD VL V
Sbjct: 130 RGDGAHPVDIAKGAIQEAVDHLRDVVIVDTAGRLQIDEQMMQEAVYIKKAVKPDQVLMVV 189
Query: 316 EALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+A+ G + V+ + F + D+ DG++++K D D + G A+S+ +TG
Sbjct: 190 DAMTGQDIVNVVSTFAER-TDF---------DGVIISKLDG-DARGGGALSVRQVTG 235
>UniRef50_Q9AXU1 Cluster: Chloroplast SRP54; n=1; Chlamydomonas
reinhardtii|Rep: Chloroplast SRP54 - Chlamydomonas
reinhardtii
Length = 549
Score = 60.5 bits (140), Expect = 2e-08
Identities = 40/122 (32%), Positives = 62/122 (50%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V ++E G IA + + A D V+IDTAGR+Q +E +M L + + P
Sbjct: 214 VPVFEDGTDVSPVRIAKKGVEEARRLGVDAVIIDTAGRLQVDEGMMAELRDVKSAVRPSD 273
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
L V +A+ G EA + + FN+A+ I G +LTK D D + GAA+S+ +
Sbjct: 274 TLLVVDAMTGQEAANLVRSFNEAVD----------ISGAILTKMDG-DSRGGAALSVREV 322
Query: 481 TG 486
+G
Sbjct: 323 SG 324
>UniRef50_P66845 Cluster: Signal recognition particle protein; n=74;
Bacteria|Rep: Signal recognition particle protein -
Mycobacterium bovis
Length = 525
Score = 59.7 bits (138), Expect = 3e-08
Identities = 41/118 (34%), Positives = 59/118 (50%)
Frame = +1
Query: 133 EKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFV 312
E G G D +A + A DVV++DTAGR+ +E LM A + PD VLFV
Sbjct: 168 ESGPG-DPVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFV 226
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+A++G +AV F + + G+ LTK D D + GAA+S+ +TG
Sbjct: 227 LDAMIGQDAVTTAAAFGEGVG----------FTGVALTKLDG-DARGGAALSVREVTG 273
>UniRef50_P37107 Cluster: Signal recognition particle 54 kDa
protein, chloroplast precursor; n=24; Magnoliophyta|Rep:
Signal recognition particle 54 kDa protein, chloroplast
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 564
Score = 59.3 bits (137), Expect = 5e-08
Identities = 40/122 (32%), Positives = 61/122 (50%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V +Y G A IA + ++ A DVV++DTAGR+Q ++ +M L + P
Sbjct: 232 VPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTE 291
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
VL V +A+ G EA + FN + I G +LTK D D + GAA+S+ +
Sbjct: 292 VLLVVDAMTGQEAAALVTTFNVEIG----------ITGAILTKLDG-DSRGGAALSVKEV 340
Query: 481 TG 486
+G
Sbjct: 341 SG 342
>UniRef50_A7HFQ6 Cluster: Signal recognition particle protein; n=4;
Cystobacterineae|Rep: Signal recognition particle
protein - Anaeromyxobacter sp. Fw109-5
Length = 550
Score = 58.8 bits (136), Expect = 6e-08
Identities = 37/104 (35%), Positives = 58/104 (55%)
Frame = +1
Query: 175 AIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLV 354
A A K +VV+ DTAGR+ +E LM L ++ P+ +L V +A++G +AV
Sbjct: 183 AFEAAPREKANVVIYDTAGRLAVDEELMVELEEIKRHVAPENILLVADAMIGQDAVKTAA 242
Query: 355 KFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+F++ LA +DG +LTK D D + GAA+S+ +TG
Sbjct: 243 EFDRRLA----------LDGFILTKLDG-DARGGAALSIKEVTG 275
>UniRef50_A3UI71 Cluster: Probable cell division protein; n=1;
Oceanicaulis alexandrii HTCC2633|Rep: Probable cell
division protein - Oceanicaulis alexandrii HTCC2633
Length = 437
Score = 58.4 bits (135), Expect = 8e-08
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G DAAG+A +AI+ K+D VLIDTAGR+Q+ LM L K+I V P VL
Sbjct: 297 GADAAGLAYDAIQQGRTEKSDAVLIDTAGRLQNKAELMDELRKIIRVIRKIDDTAPHHVL 356
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V + VG+ A+ Q F + + HV G+++TK D
Sbjct: 357 LVLDGTVGSNAISQAEAFME---------TAHV-TGVIMTKLD 389
>UniRef50_Q5LTS4 Cluster: Signal recognition particle-docking
protein FtsY; n=46; Alphaproteobacteria|Rep: Signal
recognition particle-docking protein FtsY - Silicibacter
pomeroyi
Length = 390
Score = 57.6 bits (133), Expect = 1e-07
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D A +A +A+ A + D++LIDTAGR+Q+ LM LAK++ V P L
Sbjct: 249 GSDPASLAFDAMTRAQEDGADLLLIDTAGRLQNRADLMEELAKIVRVIRKKDDTAPHNTL 308
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V +A G A+ Q+ F Q LAD + G+V+TK D
Sbjct: 309 LVLDATTGQNAISQVETF-QKLAD---------VSGLVMTKLD 341
>UniRef50_O83431 Cluster: Signal recognition particle protein; n=2;
Treponema|Rep: Signal recognition particle protein -
Treponema pallidum
Length = 452
Score = 57.6 bits (133), Expect = 1e-07
Identities = 41/111 (36%), Positives = 58/111 (52%)
Frame = +1
Query: 154 AAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGN 333
A A A++YA DV++IDTAGR+ + LM+ L L P L V +AL G
Sbjct: 172 ALDTARGALQYARSHGNDVLIIDTAGRLHVDAALMQELILLKETLVPVETLLVADALTGQ 231
Query: 334 EAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
V +F+ A+ I G+VL+KFD+ D + GAA+S+ ITG
Sbjct: 232 TVVRIAEEFHAAVG----------ISGVVLSKFDS-DTRGGAALSLKSITG 271
>UniRef50_A7ICC8 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Xanthobacter autotrophicus Py2|Rep:
Signal recognition particle-docking protein FtsY -
Xanthobacter sp. (strain Py2)
Length = 529
Score = 57.2 bits (132), Expect = 2e-07
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Frame = +1
Query: 124 TLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------ 285
T+ + G DAAG+A EA+ A D++++DTAGR+Q+ LM L K++ V
Sbjct: 383 TVIAREQGSDAAGVAHEAVVEARAAGADILMVDTAGRLQNRTELMAELEKVVRVIKKLEP 442
Query: 286 NEPDTVLFVGEALVGNEAVDQLVKFNQ 366
+ P VL V +A VG A+ Q+ F +
Sbjct: 443 SAPHAVLLVLDATVGQNALSQVEAFTR 469
>UniRef50_Q8D2V4 Cluster: Ffh protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
Ffh protein - Wigglesworthia glossinidia brevipalpis
Length = 446
Score = 56.8 bits (131), Expect = 2e-07
Identities = 29/94 (30%), Positives = 56/94 (59%)
Frame = +1
Query: 205 DVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYS 384
DV+LIDTAG N+ +++ + L +++ P LF+ ++++G ++++ + FN+ +
Sbjct: 184 DVLLIDTAGFSHTNKKMIKEIQLLQSISSPSETLFIVDSMMGQDSINSIKTFNEKFS--- 240
Query: 385 SSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+ G++LTK D D + G A+S+ YITG
Sbjct: 241 -------LTGVILTKLDG-DSRGGIALSIKYITG 266
>UniRef50_Q5P9Q2 Cluster: Cell division protein; n=2; Anaplasma|Rep:
Cell division protein - Anaplasma marginale (strain St.
Maries)
Length = 305
Score = 56.8 bits (131), Expect = 2e-07
Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G DAA IA +A+ A K DVVLIDTAGR+Q+++ LM LAK+ V P +
Sbjct: 167 GADAASIAYKAVDQAIREKIDVVLIDTAGRLQNHKNLMEELAKVRRVIGRHDKKAPHNTI 226
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V +A +G A Q+ F SS ++GIVLTK D
Sbjct: 227 IVLDATIGQNAFSQVELF----------SSFAGVNGIVLTKLD 259
>UniRef50_Q57AW4 Cluster: FtsY, signal recognition particle-docking
protein; n=23; Alphaproteobacteria|Rep: FtsY, signal
recognition particle-docking protein - Brucella abortus
Length = 463
Score = 56.4 bits (130), Expect = 3e-07
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G DAAG+A +A A + +DV++IDTAGR+Q+ LM LAK++ V P TVL
Sbjct: 324 GADAAGLAYDAWEKAKEAGSDVLIIDTAGRLQNKAELMDELAKIVRVLGKHDPEAPHTVL 383
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A G A++Q+ F ++G+V+TK D
Sbjct: 384 QTLDATTGQNALNQVEIFKNVAG----------VNGLVMTKLD 416
>UniRef50_Q7UI11 Cluster: Signal recognition particle protein; n=2;
Planctomycetaceae|Rep: Signal recognition particle
protein - Rhodopirellula baltica
Length = 491
Score = 55.6 bits (128), Expect = 6e-07
Identities = 37/113 (32%), Positives = 55/113 (48%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALV 327
KD + + A VV++DTAGR+ + LM L K+ PD V V + +
Sbjct: 165 KDPVKVCQAGVEMARRDGNRVVILDTAGRLAIDAELMAELKKIDRKVGPDQVYLVVDGMT 224
Query: 328 GNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
G +AV+ FN AL +DG+V+TK D D + GA +S+ +TG
Sbjct: 225 GQDAVNSAGAFNDALE----------LDGVVMTKLDG-DARGGALLSVKQVTG 266
>UniRef50_A4E6S8 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 305
Score = 55.6 bits (128), Expect = 6e-07
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNE--- 291
V + ++ G D A + + + A +D+VLIDTAGR+ + LMR LAK++ V
Sbjct: 152 VPVIKRDRGSDPASVCYDVLDEADKRGSDLVLIDTAGRLHTSPELMRELAKVVNVTRKRA 211
Query: 292 --------PDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
P +V+ V +A G ++Q ++FN+AL +DGI++TK D
Sbjct: 212 ANMAAGPMPVSVVLVIDAATGQNGLNQALEFNEALG----------LDGIIMTKLD 257
>UniRef50_Q89AE4 Cluster: Signal recognition particle protein; n=3;
cellular organisms|Rep: Signal recognition particle
protein - Buchnera aphidicola subsp. Baizongia pistaciae
Length = 450
Score = 55.6 bits (128), Expect = 6e-07
Identities = 32/107 (29%), Positives = 59/107 (55%)
Frame = +1
Query: 163 IAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAV 342
I AI++A DV+LIDTAGR+Q ++ +M L + ++ P FV +A+ G +++
Sbjct: 171 IVQHAIQHAKLKFYDVLLIDTAGRLQIDKKMMNELLDVYNISHPIETFFVADAMFGQDSI 230
Query: 343 DQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
+ + +FN+ L + ++TK D+ D + G +S+ Y+T
Sbjct: 231 NVINEFNKYLP----------VSSFIITKTDS-DTRAGIILSIKYLT 266
>UniRef50_Q11CW5 Cluster: Signal recognition particle-docking
protein FtsY; n=11; Rhizobiales|Rep: Signal recognition
particle-docking protein FtsY - Mesorhizobium sp.
(strain BNC1)
Length = 500
Score = 54.8 bits (126), Expect = 1e-06
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G DAAG+A EA A +DV++IDTAGR+Q+ LM L K++ V P TVL
Sbjct: 361 GADAAGLAYEAYEKAKAAGSDVLIIDTAGRLQNKAELMAELEKIVRVLGKHDPEAPHTVL 420
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A G A++Q+ F + G+V+TK D
Sbjct: 421 QTLDATTGQNALNQVEIFRNVAG----------VSGLVMTKLD 453
>UniRef50_O67066 Cluster: Cell division protein ftsY homolog; n=5;
Bacteria|Rep: Cell division protein ftsY homolog -
Aquifex aeolicus
Length = 461
Score = 54.8 bits (126), Expect = 1e-06
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV----- 285
V + +K G D + E ++ A + +VVL+DTAGR+ EPL+ L K+ V
Sbjct: 316 VDIVKKEEGSDPGAVVYEGMKKAKEEGYEVVLVDTAGRLHTKEPLINELRKIKKVIQKFD 375
Query: 286 -NEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAA 462
EP L V +A G A+ Q F +A+ I GIV+TK D K GA
Sbjct: 376 KEEPSETLLVIDATTGQNAIQQAKVFKEAVD----------ITGIVVTKLDG-SAKGGAV 424
Query: 463 ISM 471
+++
Sbjct: 425 VAI 427
>UniRef50_Q0BWE6 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Hyphomonas neptunium ATCC 15444|Rep:
Signal recognition particle-docking protein FtsY -
Hyphomonas neptunium (strain ATCC 15444)
Length = 414
Score = 54.4 bits (125), Expect = 1e-06
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +1
Query: 142 YGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTV 303
+G DAAG+ A+ A D+VL+DTAGR+Q+ LM L K++ V + P V
Sbjct: 272 HGADAAGLVYGAVERAKAEDLDLVLVDTAGRLQNKAELMSELGKIVRVMKKIDPDAPHDV 331
Query: 304 LFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+ V +A VG A+ Q+ F + G+V+TK D
Sbjct: 332 ILVLDATVGQNALSQVEAFRHTAG----------VTGLVMTKLD 365
>UniRef50_A1RXH9 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Thermofilum pendens Hrk 5|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Thermofilum pendens (strain Hrk 5)
Length = 431
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V Y +DA +A+ ++ SD ++LIDTAGR +D E LM + L +PD
Sbjct: 155 VPFYGDPQERDAVSLALRGVKVLSDKGIQMILIDTAGRHKDEEALMEEVKTLYREVKPDA 214
Query: 301 VLFVGEALVGNEAVDQLVKFNQAL 372
V+ V +A G+ Q F +A+
Sbjct: 215 VVLVVDATQGSAVARQARAFQEAM 238
>UniRef50_P44518 Cluster: Signal recognition particle protein;
n=298; Bacteria|Rep: Signal recognition particle protein
- Haemophilus influenzae
Length = 462
Score = 53.6 bits (123), Expect = 2e-06
Identities = 37/122 (30%), Positives = 61/122 (50%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V + ++ IA A+ A DV+++DTAGR+ + +M + ++ A P
Sbjct: 157 VDFFPSDVKQNPVDIAKSALADAKLKFYDVLIVDTAGRLHVDTEMMDEIKQVHAALNPIE 216
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
LF +A+ G +A + FN+AL + G++LTK D D + GAA+S+ I
Sbjct: 217 TLFTVDAMTGQDAANTAKAFNEALP----------LTGVILTKVDG-DARGGAALSIRQI 265
Query: 481 TG 486
TG
Sbjct: 266 TG 267
>UniRef50_UPI00015BCE02 Cluster: UPI00015BCE02 related cluster; n=1;
unknown|Rep: UPI00015BCE02 UniRef100 entry - unknown
Length = 463
Score = 53.2 bits (122), Expect = 3e-06
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IA 282
V + +K G D A +A EA + + DVV+IDTAGR+ EPL+ L K+
Sbjct: 318 VDIVKKQEGADPASVAFEATKKGLEEDYDVVIIDTAGRLHTKEPLINELRKIKKSIQKAY 377
Query: 283 VNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAA 462
P L V ++ +G ++ Q F +A+ I+G+V+TK D K G+
Sbjct: 378 EKAPQKALLVIDSTIGQNSISQAKIFKEAVD----------INGLVITKLDG-TSKGGSV 426
Query: 463 ISM 471
IS+
Sbjct: 427 ISI 429
>UniRef50_Q8G736 Cluster: FtsY signal recognition particle; n=4;
Bifidobacterium|Rep: FtsY signal recognition particle -
Bifidobacterium longum
Length = 420
Score = 53.2 bits (122), Expect = 3e-06
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEP----DTVLFV 312
G D A +A EA A + DV++IDTAGR+Q+ LM L K+ V E D VL V
Sbjct: 285 GADPASVAFEASAKAKEANADVLIIDTAGRLQNKSNLMDELGKIRRVTEKNLPVDEVLLV 344
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A G + Q F +A+ I G+VL+K D
Sbjct: 345 LDATTGQNGMAQAKVFAEAIG----------ITGVVLSKLD 375
>UniRef50_A6FXA0 Cluster: Signal recognition particle protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Signal recognition
particle protein - Plesiocystis pacifica SIR-1
Length = 591
Score = 53.2 bits (122), Expect = 3e-06
Identities = 37/114 (32%), Positives = 57/114 (50%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEAL 324
G + I +A A+ D VL DTAGR+ ++ LM L K+ + P + V +A+
Sbjct: 172 GANPVDICRDATEQAAMEGMDFVLYDTAGRLTVDDALMEELEKIESSVHPANIFLVIDAM 231
Query: 325 VGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+G +AV F++ L + G+VLTK D D + GAA+S+ TG
Sbjct: 232 IGQDAVQTAKAFDERLE----------LTGVVLTKLDG-DARGGAALSIKAATG 274
>UniRef50_A0RUN9 Cluster: Signal recognition particle GTPase; n=1;
Cenarchaeum symbiosum|Rep: Signal recognition particle
GTPase - Cenarchaeum symbiosum
Length = 397
Score = 52.8 bits (121), Expect = 4e-06
Identities = 36/122 (29%), Positives = 60/122 (49%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V +Y + DA + +R+ D+ DV+L+DTAGR ++ L+ + ++ EPD
Sbjct: 113 VEVYGEEGESDAPAVVRRGLRHFGDS-CDVILVDTAGRHKEEGELLDEMKRIGKAAEPDL 171
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
L V + +GN Q F++ + + GIV+TK D+ K G AI+ +
Sbjct: 172 ALLVIDGTIGNRCYAQAEAFHKTVP----------VGGIVVTKLDS-SAKGGGAIAASAA 220
Query: 481 TG 486
TG
Sbjct: 221 TG 222
>UniRef50_Q8TUY9 Cluster: Signal recognition 54 kDa protein; n=4;
Euryarchaeota|Rep: Signal recognition 54 kDa protein -
Methanopyrus kandleri
Length = 447
Score = 52.8 bits (121), Expect = 4e-06
Identities = 39/112 (34%), Positives = 60/112 (53%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
DA +A++ + D + DVV++DTAGR + +E L+ L ++ EP VL V +A VG
Sbjct: 166 DAVEMAVKGVEALKD-ECDVVIVDTAGRDRLSEDLIDELREMAERIEPHEVLLVLDATVG 224
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+A D F++A+ + G+V+TK DT K G A+S TG
Sbjct: 225 QKAGDHAEAFHEAVQ----------LTGVVITKLDTA-AKGGGALSAVARTG 265
>UniRef50_Q6MBM6 Cluster: Probable signal recognition particle; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Probable signal recognition particle - Protochlamydia
amoebophila (strain UWE25)
Length = 309
Score = 52.4 bits (120), Expect = 5e-06
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Frame = +1
Query: 136 KGYGK-DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IAVNEP 294
KG+ K D A +A +AI+ A K D+V+IDTAGR+ PLM+ L K+ + P
Sbjct: 168 KGHPKSDPAAVAFDAIQAAKARKCDLVIIDTAGRLHTKTPLMQELEKIKRSCQKASQTGP 227
Query: 295 DTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
L V +A G A++Q +F+ +P I G++LTK D
Sbjct: 228 HETLLVLDATTGQNAIEQAKQFHH--------FTP--ITGLILTKLD 264
>UniRef50_Q2RV63 Cluster: Cell division transporter
substrate-binding protein FtsY; n=1; Rhodospirillum
rubrum ATCC 11170|Rep: Cell division transporter
substrate-binding protein FtsY - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 506
Score = 52.4 bits (120), Expect = 5e-06
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNE------PDTVL 306
G D+AG+A +A++ A DV+LIDTAGR+ + LM L K++ V P T L
Sbjct: 367 GADSAGLAFDALQKARAEGYDVLLIDTAGRLHNKTELMEELKKVVRVLRKIDPAVPHTCL 426
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V +A VG A Q VK Q + D + G+V+TK D
Sbjct: 427 QVLDATVGQNA-HQQVKVFQEMTD---------VSGLVMTKLD 459
>UniRef50_A7H885 Cluster: Signal recognition particle-docking
protein FtsY; n=4; Cystobacterineae|Rep: Signal
recognition particle-docking protein FtsY -
Anaeromyxobacter sp. Fw109-5
Length = 465
Score = 52.4 bits (120), Expect = 5e-06
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D A + EA++ + DVVL DTAGR+ PLM L K+ V P VL
Sbjct: 328 GADPASVCFEAVQRGAQDGADVVLCDTAGRLHTKAPLMEELKKVKRVIGKAVDGAPHEVL 387
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V ++ G A+ Q +F++AL + GIVLTK D
Sbjct: 388 LVLDSTNGQNAIAQARQFHEALG----------VTGIVLTKID 420
>UniRef50_Q4UKH4 Cluster: Signal recognition particle protein; n=11;
Rickettsia|Rep: Signal recognition particle protein -
Rickettsia felis (Rickettsia azadi)
Length = 449
Score = 52.4 bits (120), Expect = 5e-06
Identities = 37/113 (32%), Positives = 56/113 (49%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEAL 324
G+ I AI A + VV+ DTAGR Q ++ +M + + EP L V +++
Sbjct: 166 GEKPLDIVKRAIAEAKISAYGVVIYDTAGRTQIDKEMMEEALAIKKIVEPTETLLVIDSM 225
Query: 325 VGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
G +AV FN+ L I G++L++ D D K GAA+S+ YIT
Sbjct: 226 TGQDAVVTANSFNEKLE----------ISGLILSRIDG-DSKGGAALSVKYIT 267
>UniRef50_A5EYA3 Cluster: Signal recognition particle FtsY; n=2;
Dichelobacter nodosus|Rep: Signal recognition particle
FtsY - Dichelobacter nodosus (strain VCS1703A)
Length = 450
Score = 52.0 bits (119), Expect = 7e-06
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNE------PDTVL 306
G DAA +A +A++ A K DV++IDTAGR+ + LM L K+ V + P L
Sbjct: 311 GADAASVAYDALQSAQARKMDVLIIDTAGRLHTQDHLMDELKKVKRVLQKLDDKVPHETL 370
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V +A G A+ Q + F+Q + +DG+V+TK D
Sbjct: 371 LVIDAGNGQNALKQALSFHQDIG----------VDGLVITKLD 403
>UniRef50_P75054 Cluster: Signal recognition particle protein; n=7;
Mycoplasmataceae|Rep: Signal recognition particle
protein - Mycoplasma pneumoniae
Length = 450
Score = 52.0 bits (119), Expect = 7e-06
Identities = 31/101 (30%), Positives = 53/101 (52%)
Frame = +1
Query: 172 EAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQL 351
EA++ ++ ++ DTAGR+Q N+ LM L + PD +L V + L G E ++
Sbjct: 172 EAVKTFKESGCQAIICDTAGRLQTNQELMDELVAIKNELHPDEILMVVDGLSGQEIINVA 231
Query: 352 VKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMT 474
+F+ L + G ++TK D+ D + GAA+S+T
Sbjct: 232 KEFHNRLK----------LTGFIITKLDS-DARAGAALSLT 261
>UniRef50_O05289 Cluster: FtsY protein; n=5; Mollicutes|Rep: FtsY
protein - Mycoplasma mycoides
Length = 412
Score = 51.2 bits (117), Expect = 1e-05
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IAVNEPDTVLFV 312
D A + +AI+ A + D++LIDTAGR+Q+ LM L K+ + + P VL V
Sbjct: 267 DPASVVFDAIKKAKEQNYDLLLIDTAGRLQNKTNLMAELEKMNKIIQQVEKSAPHEVLLV 326
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD-TIDDKVGAAI 465
+A G V Q +F++ +AD + GI+LTK D T +G AI
Sbjct: 327 IDATTGQNGVIQAEEFSK-VAD---------VSGIILTKMDSTSKGGIGLAI 368
>UniRef50_O59332 Cluster: Putative uncharacterized protein PH1670;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH1670 - Pyrococcus horikoshii
Length = 102
Score = 51.2 bits (117), Expect = 1e-05
Identities = 39/104 (37%), Positives = 56/104 (53%)
Frame = -2
Query: 482 VMYVIDMAAPTLSSIVSNLVSTIPSMTCGLLDEL*SARAWLNLTSWSTASFPTRASPTKS 303
+ ++I AAP L+S S+ V+ PS+ AWLN + ST +FP + SPTK
Sbjct: 10 ITWLILKAAPPLAS-ASSFVNITPSIFT----------AWLNCLACSTIAFPAKESPTKI 58
Query: 302 TVSGSLTAMSLARARIRGSLSCIRPAVSMSTTSVLVSDAYRIAS 171
T G +T + IR L + PAVS+ TTS+ ++ A IAS
Sbjct: 59 TRLGFVTLAIFFISSIRFLLVSLLPAVSIKTTSIPLALACWIAS 102
>UniRef50_Q4FT71 Cluster: Cell division transporter
substrate-binding protein FtsY; n=2; Psychrobacter|Rep:
Cell division transporter substrate-binding protein FtsY
- Psychrobacter arcticum
Length = 478
Score = 50.4 bits (115), Expect = 2e-05
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV----- 285
+ + +G+G D+A + +A++ A DV++ DTAGR+Q+ LM L K++ V
Sbjct: 328 IPVVAQGHGSDSASVIFDAMQSAKAKNIDVLIADTAGRLQNKTHLMAELEKVVRVMRKAD 387
Query: 286 -NEPDTVLFVGEALVGNEAVDQLVKFNQAL 372
+ P + V +A G A++Q+ FN+ +
Sbjct: 388 SSAPHEGMIVLDAGTGQNAINQVELFNKVV 417
>UniRef50_A5CCH6 Cluster: Cell division ABC transporter, periplasmic
substrate-binding protein; n=1; Orientia tsutsugamushi
Boryong|Rep: Cell division ABC transporter, periplasmic
substrate-binding protein - Orientia tsutsugamushi
(strain Boryong) (Rickettsia tsutsugamushi)
Length = 312
Score = 50.4 bits (115), Expect = 2e-05
Identities = 33/115 (28%), Positives = 58/115 (50%)
Frame = +1
Query: 127 LYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVL 306
L++ G D A +A +A+ +A D K +++ IDTAGR+ +++ LM L K+ V
Sbjct: 160 LFKGNPGADPASVAYQAVSWAIDNKINILFIDTAGRLHNHKNLMDQLKKIKKVINQYHSS 219
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISM 471
V L+ +A + F Q ++DG+++TK D+ K G A+ +
Sbjct: 220 SVCYTLLTLDATNGQNAFTQV----EQFQDIVLLDGVIITKLDS-TSKAGVAVGI 269
>UniRef50_A3IG83 Cluster: Recognition particle-docking protein;
n=18; Bacteria|Rep: Recognition particle-docking protein
- Bacillus sp. B14905
Length = 424
Score = 50.4 bits (115), Expect = 2e-05
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D A + +AIR A + K DV++ DTAGR+Q+ LM L K+ V + P VL
Sbjct: 275 GSDPAAVMYDAIRAAKNRKADVLICDTAGRLQNKVNLMNELEKVHRVISREIPSAPHEVL 334
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A G A+ Q F +A + GIVLTK D
Sbjct: 335 LALDATTGQNALVQAQTFKEATN----------VTGIVLTKLD 367
>UniRef50_A4WFP3 Cluster: Signal recognition particle-docking
protein FtsY; n=9; Bacteria|Rep: Signal recognition
particle-docking protein FtsY - Enterobacter sp. 638
Length = 511
Score = 50.0 bits (114), Expect = 3e-05
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D+A + +AI+ A DV++ DTAGR+Q+ LM L K++ V + P ++
Sbjct: 371 GADSASVIFDAIQAAKARNVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDEDAPHEIM 430
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A G A+ Q F++A+ + GI LTK D
Sbjct: 431 LTLDASTGQNAISQAKLFHEAVG----------LTGITLTKLD 463
>UniRef50_A3VPZ8 Cluster: FtsY, signal recognition particle-docking
protein; n=6; Alphaproteobacteria|Rep: FtsY, signal
recognition particle-docking protein - Parvularcula
bermudensis HTCC2503
Length = 459
Score = 50.0 bits (114), Expect = 3e-05
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV----- 285
V + + G D A +A +A+ A D+VLIDTAGR+Q+ LM L K++ V
Sbjct: 311 VPVISREQGADPAALAYDAVAKAQAEGIDIVLIDTAGRLQNRRELMDELGKIVRVVKKLD 370
Query: 286 -NEPDTVLFVGEALVGNEAVDQLVKF 360
+ P + V +A VG A+ Q F
Sbjct: 371 DSAPHDAVLVLDATVGQNALSQTEAF 396
>UniRef50_A3ER96 Cluster: Signal recognition particle GTPase; n=1;
Leptospirillum sp. Group II UBA|Rep: Signal recognition
particle GTPase - Leptospirillum sp. Group II UBA
Length = 309
Score = 50.0 bits (114), Expect = 3e-05
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D A +A + ++ A K DV +IDTAGR+Q LM L K+ + + P L
Sbjct: 165 GADPAAVAFDTVKAALARKVDVAIIDTAGRLQTKHNLMAELGKIHGLVKREMEDRPFETL 224
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISM 471
V ++ +G V Q+ F +A+ + G++LTK D K G +S+
Sbjct: 225 IVLDSTLGQNTVSQMEHFRKAIP----------VSGMILTKLDG-TSKGGIVVSL 268
>UniRef50_Q895M6 Cluster: Signal recognition particle receptor ftsY;
n=15; Clostridiales|Rep: Signal recognition particle
receptor ftsY - Clostridium tetani
Length = 303
Score = 49.6 bits (113), Expect = 4e-05
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPD- 297
V + + G D A + ++I+ A KTDV++ DTAGR+ + + LM L+K+ + E +
Sbjct: 159 VDIIRQQEGSDPAAVVFDSIQAAKARKTDVLICDTAGRLHNKKNLMDELSKINRIVEREY 218
Query: 298 -----TVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAA 462
V +A G A+ Q +F Q +DGI+LTK D K G
Sbjct: 219 SEANKKTYLVLDATTGQNALQQAKQFTQVCN----------VDGIILTKLDG-TAKGGIV 267
Query: 463 ISMTY 477
IS+ +
Sbjct: 268 ISIKH 272
>UniRef50_Q8GDY7 Cluster: Signal recognition particle receptor FtsY;
n=1; Heliobacillus mobilis|Rep: Signal recognition
particle receptor FtsY - Heliobacillus mobilis
Length = 364
Score = 49.6 bits (113), Expect = 4e-05
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D + +A +A++ A ++DV++IDTAGR+ + LM L+K+ V P L
Sbjct: 166 GADPSAVAFDAVQAAKSRESDVLIIDTAGRLHNKSHLMNELSKINRVLGRAMPGAPHETL 225
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V +A G A+ Q F +A+ + G+VLTK D
Sbjct: 226 LVLDATTGQNALSQARIFGEAVG----------LTGLVLTKLD 258
>UniRef50_P49966 Cluster: Signal recognition particle 54 kDa protein
2; n=8; Magnoliophyta|Rep: Signal recognition particle
54 kDa protein 2 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 495
Score = 49.6 bits (113), Expect = 4e-05
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
+ Y G D IA+E + D++++DT+GR + L + ++ +PD
Sbjct: 157 IPYYGSYTGSDPVKIAVEGVDRFKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDL 216
Query: 301 VLFVGEALVGNEAVDQLVKFNQALA 375
V+FV ++ +G A +Q F Q +A
Sbjct: 217 VIFVMDSSIGQTAFEQARAFKQTVA 241
>UniRef50_Q2GDL8 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Neorickettsia sennetsu str.
Miyayama|Rep: Signal recognition particle-docking
protein FtsY - Neorickettsia sennetsu (strain Miyayama)
Length = 309
Score = 49.2 bits (112), Expect = 5e-05
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +1
Query: 124 TLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------ 285
T + K+A+G A +A+ A + K DV+++DT+GR+ LM L K+ V
Sbjct: 159 TFFSSETSKNASGTAYKALEKALEDKVDVLIVDTSGRLHTQNDLMEELKKICRVLSKLMP 218
Query: 286 NEPDTVLFVGEALVGNEAVDQLVKFNQAL 372
+ P+ V+ +A G A++Q+ F A+
Sbjct: 219 SAPNEVILALDASTGQNALNQVQVFKDAV 247
>UniRef50_Q0HPY1 Cluster: Signal recognition particle-docking
protein FtsY; n=21; Bacteria|Rep: Signal recognition
particle-docking protein FtsY - Shewanella sp. (strain
MR-7)
Length = 584
Score = 49.2 bits (112), Expect = 5e-05
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D+A + +A++ A K DV++ DTAGR+Q+ LM L K++ V P V+
Sbjct: 441 GADSASVLFDALQAAKARKIDVLIADTAGRLQNKSHLMEELKKVVRVMKKLDPEAPHEVM 500
Query: 307 FVGEALVGNEAVDQLVKFNQAL 372
+A G A+ Q F +A+
Sbjct: 501 LTLDASTGQNAISQAQLFQEAV 522
>UniRef50_A3ER43 Cluster: Signal recognition particle GTPase; n=2;
Bacteria|Rep: Signal recognition particle GTPase -
Leptospirillum sp. Group II UBA
Length = 444
Score = 48.8 bits (111), Expect = 6e-05
Identities = 30/94 (31%), Positives = 52/94 (55%)
Frame = +1
Query: 205 DVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYS 384
+VV++DTAGR+ ++ LM+ L+ L + +P L V +A+ G E+V F++ +
Sbjct: 185 EVVILDTAGRLSIDQNLMKELSDLRELYKPKEALLVLDAMTGQESVHVAKAFDETIG--- 241
Query: 385 SSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
IDG++ TK D D + GA +S+ + G
Sbjct: 242 -------IDGVIFTKLDG-DARGGAILSIRSVMG 267
>UniRef50_A2E0A3 Cluster: SRP54-type protein, putative; n=2;
Trichomonas vaginalis G3|Rep: SRP54-type protein,
putative - Trichomonas vaginalis G3
Length = 494
Score = 48.8 bits (111), Expect = 6e-05
Identities = 32/112 (28%), Positives = 52/112 (46%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALV 327
+D A++ I K ++V+IDT+GR E L + L A P ++FV + +
Sbjct: 165 QDPVQAALKGIEKFRKDKYEIVIIDTSGRHMQEEALFAEMKALAAAVNPHEIIFVMDGTI 224
Query: 328 GNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
G A DQ + F A+ + I++TK D+ + K G A+S T
Sbjct: 225 GQAAYDQALGFKNAVG----------VGSIIITKLDS-NAKGGGALSAVAAT 265
>UniRef50_O15821 Cluster: Signal recognition particle 54 kDa
protein; n=3; Entamoeba histolytica|Rep: Signal
recognition particle 54 kDa protein - Entamoeba
histolytica
Length = 487
Score = 48.8 bits (111), Expect = 6e-05
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D +A E +R K D++L+DT+GR + ++ L + + + +PD+++FV + +G
Sbjct: 167 DPVKVASEGVRTFRKEKNDIILVDTSGRHKQDKELFKEMQSVRDAIKPDSIIFVMDGAIG 226
Query: 331 NEAVDQLVKFNQAL 372
A Q F A+
Sbjct: 227 QAAFGQAKAFKDAV 240
>UniRef50_Q9PC71 Cluster: Cell division protein; n=11;
Xanthomonadaceae|Rep: Cell division protein - Xylella
fastidiosa
Length = 397
Score = 48.4 bits (110), Expect = 9e-05
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +1
Query: 118 MVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV---- 285
+ + +KG DAA + +A++ A T+V++ DTAGR+ LM L+K+ V
Sbjct: 245 ITVIAQKGPNADAASVVYDALQAAKARSTEVLIADTAGRLHTQIGLMNELSKIRRVLGKL 304
Query: 286 --NEPDTVLFVGEALVGNEAVDQLVKFNQAL 372
P VL V + G A+ QL +F+ A+
Sbjct: 305 DSTAPHEVLMVIDGTTGQNALSQLRQFHAAV 335
>UniRef50_Q058E9 Cluster: Signal recognition particle receptor; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: Signal
recognition particle receptor - Buchnera aphidicola
subsp. Cinara cedri
Length = 346
Score = 48.4 bits (110), Expect = 9e-05
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL-IAVNEPD 297
+ ++ K G D + +A ++I YA K D+V+IDTAGRM + L++ L K+ + +
Sbjct: 199 IEIFYKSIGSDPSSVAFDSIIYAKKKKIDIVIIDTAGRMHNKMHLIQELKKMNRVIKKCC 258
Query: 298 TVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDT 438
+ F LV + + Q ++ SS I G ++TK D+
Sbjct: 259 STAFYKTYLVIDAGIGQ-----NSIQQAKIFSSEINISGSIITKLDS 300
>UniRef50_Q97ZE7 Cluster: Signal recognition 54 kDa protein; n=8;
Thermoprotei|Rep: Signal recognition 54 kDa protein -
Sulfolobus solfataricus
Length = 447
Score = 48.4 bits (110), Expect = 9e-05
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEP--LMRALAKLIAVNEP 294
V +Y + ++ IA + + K D++++DTAGR E L+ + ++ V +P
Sbjct: 152 VQVYGEPNNQNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLKP 211
Query: 295 DTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMT 474
D V+ V +A +G +A D +F+QA SP I +++TK D K G A+S
Sbjct: 212 DDVILVIDASIGQKAYDLASRFHQA--------SP--IGSVIITKMDG-TAKGGGALSAV 260
Query: 475 YITG 486
TG
Sbjct: 261 VATG 264
>UniRef50_Q6YPP7 Cluster: Signal recognition particle GTPase; n=2;
Candidatus Phytoplasma asteris|Rep: Signal recognition
particle GTPase - Onion yellows phytoplasma
Length = 426
Score = 48.0 bits (109), Expect = 1e-04
Identities = 31/102 (30%), Positives = 53/102 (51%)
Frame = +1
Query: 178 IRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVK 357
+++A D V+IDTAGR+ +E +M+ L ++ A P +L V + L G ++ +
Sbjct: 146 LKHALQEGYDAVIIDTAGRLDIDETMMQELQQIKAKANPSEILLVVDCLSGQQSANIAQS 205
Query: 358 FNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
F+ + G++LTK D D K GAA+S+ +T
Sbjct: 206 FHNQVG----------ATGVILTKMDA-DTKGGAALSVRAMT 236
>UniRef50_Q8ZT95 Cluster: Signal recognition 54 kDa protein; n=5;
Thermoproteaceae|Rep: Signal recognition 54 kDa protein
- Pyrobaculum aerophilum
Length = 433
Score = 48.0 bits (109), Expect = 1e-04
Identities = 29/88 (32%), Positives = 46/88 (52%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V Y + GKDA IA ++ + DV+++DTAGR ++ E L++ + + PD
Sbjct: 155 VPFYGERDGKDAVEIAKRGVQNFKNM--DVIIVDTAGRHRNEEALLKEVRAIYDAVSPDE 212
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYS 384
V+ V +A VG A Q F + L +S
Sbjct: 213 VVLVIDATVGKMAAAQAEAFMKYLPIHS 240
>UniRef50_Q9Z966 Cluster: Signal Recognition Particle GTPase; n=8;
Chlamydiaceae|Rep: Signal Recognition Particle GTPase -
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Length = 448
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/108 (26%), Positives = 56/108 (51%)
Frame = +1
Query: 163 IAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAV 342
+ ++A+ YA + D V++DTAGR+ + LM L + V++ + LFV +G + +
Sbjct: 170 VVVKALAYAKENGHDFVILDTAGRLNIDNELMEELTAIQKVSQANERLFVMNVAMGQDVL 229
Query: 343 DQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+ F+Q+L + G++L+ D D + GA S+ ++ G
Sbjct: 230 ATVQAFDQSLD----------LTGVILSMTDG-DARAGAVFSIKHVLG 266
>UniRef50_P37106 Cluster: Signal recognition particle 54 kDa protein
1; n=5; Eukaryota|Rep: Signal recognition particle 54
kDa protein 1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 479
Score = 47.6 bits (108), Expect = 1e-04
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D IA+E + K D++++DT+GR + L + ++ EPD V+FV ++ +G
Sbjct: 167 DPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIG 226
Query: 331 NEAVDQLVKFNQALA 375
A +Q F + ++
Sbjct: 227 QAAFEQAEAFKETVS 241
>UniRef50_Q97IA0 Cluster: Signal recognition particle GTPase, FtsY;
n=4; Bacteria|Rep: Signal recognition particle GTPase,
FtsY - Clostridium acetobutylicum
Length = 303
Score = 47.2 bits (107), Expect = 2e-04
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPD------TVL 306
G D A + +AI A K DV++ DTAGR+ + + LM L K+ + + + L
Sbjct: 167 GSDPAAVVFDAIEAAKARKADVLICDTAGRLHNKKNLMNELEKINRIIDREFSQSTRRTL 226
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V +A G AV Q +F + +DGIVLTK D
Sbjct: 227 LVLDATTGQNAVIQAKQFMEVCK----------VDGIVLTKLD 259
>UniRef50_A1IE17 Cluster: Cell division protein FtsY; n=2;
Bacteria|Rep: Cell division protein FtsY - Candidatus
Desulfococcus oleovorans Hxd3
Length = 381
Score = 47.2 bits (107), Expect = 2e-04
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL---IAVNEPDT---VLFV 312
D A +A + + A DVV++DTAGR+ LM L K+ ++ PD VL V
Sbjct: 247 DPAAVAYDGVEAARARGVDVVIVDTAGRLHTKVNLMEELKKIKRSMSKTMPDAPHEVLLV 306
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+A G A+ Q F +A AD + GIVLTK D K G AI++ + G
Sbjct: 307 LDATTGQNAISQTELFTKA-AD---------VTGIVLTKLDG-TAKGGIAINLRHSFG 353
>UniRef50_P51835 Cluster: Cell division protein ftsY homolog; n=43;
Firmicutes|Rep: Cell division protein ftsY homolog -
Bacillus subtilis
Length = 329
Score = 47.2 bits (107), Expect = 2e-04
Identities = 34/105 (32%), Positives = 51/105 (48%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V + ++ G D A + +A+ A DV++ DTAGR+Q+ LM+ L K+ V E +
Sbjct: 176 VPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREV 235
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
E L+ A+D N A+A S + GI LTK D
Sbjct: 236 PEAPHEVLL---ALDATTGQN-AMAQAKEFSKATNVTGIALTKLD 276
>UniRef50_Q1V114 Cluster: Cell division particle; n=2; Candidatus
Pelagibacter ubique|Rep: Cell division particle -
Candidatus Pelagibacter ubique HTCC1002
Length = 305
Score = 46.8 bits (106), Expect = 3e-04
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNE--- 291
V + + G D A +A +AI A + VLIDTAGR+Q+ + LM K+ V +
Sbjct: 158 VQITKSTQGSDPASVAYKAIEEALKNDFNHVLIDTAGRLQNKKNLMEEYKKIAHVTKKID 217
Query: 292 ---PDTVLFVGEALVGNEAVDQLVKFNQAL 372
P V+ V +A G + Q+ +FN+ +
Sbjct: 218 PDAPHDVILVLDATSGQNVISQVEEFNKII 247
>UniRef50_Q83MV0 Cluster: Signal recognition particle protein; n=2;
Tropheryma whipplei|Rep: Signal recognition particle
protein - Tropheryma whipplei (strain Twist) (Whipple's
bacillus)
Length = 448
Score = 46.4 bits (105), Expect = 3e-04
Identities = 30/99 (30%), Positives = 56/99 (56%)
Frame = +1
Query: 178 IRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVK 357
++ A + + V++IDTAGRM + +M L+++ + +P L V ++ G EA++
Sbjct: 176 VKTAREKQFSVLIIDTAGRMNADSDMMDQLSEIDRLAKPHQTLLVVDSATGQEALNITRV 235
Query: 358 FNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMT 474
F Q L+ + G+V++K D+ D K GAA+S++
Sbjct: 236 FCQHLS----------VTGVVMSKLDS-DVKAGAALSVS 263
>UniRef50_Q64TK4 Cluster: Recognition particle-docking protein FtsY;
n=9; Bacteria|Rep: Recognition particle-docking protein
FtsY - Bacteroides fragilis
Length = 319
Score = 46.4 bits (105), Expect = 3e-04
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IA 282
V + ++ G D A +A + + A DVV+IDTAGR+ + LM L K+ +
Sbjct: 171 VPVIKQKMGADPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVV 230
Query: 283 VNEPDTVLFVGEALVGNEAVDQLVKFNQA 369
+ P+ VL V + G A +Q +F A
Sbjct: 231 PDAPNEVLLVLDGSTGQNAFEQAKQFTLA 259
>UniRef50_A2F1E7 Cluster: SRP54-type protein, putative; n=1;
Trichomonas vaginalis G3|Rep: SRP54-type protein,
putative - Trichomonas vaginalis G3
Length = 482
Score = 46.4 bits (105), Expect = 3e-04
Identities = 29/111 (26%), Positives = 53/111 (47%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D +A+ + + D++++DT+G+ L + + ++ PD ++FV +A +G
Sbjct: 166 DPISVAISGVEKFKRERYDMIIVDTSGKHAQENALFQEMQEMQDAINPDEIIFVLDANIG 225
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
A DQ F++A+ I I++TK D+ K G AIS T
Sbjct: 226 QSAFDQATAFSKAVD----------IGSIIMTKLDS-GTKGGGAISAVAAT 265
>UniRef50_Q68VX4 Cluster: Cell division protein ftsY homolog; n=22;
Rickettsiaceae|Rep: Cell division protein ftsY homolog -
Rickettsia typhi
Length = 303
Score = 46.4 bits (105), Expect = 3e-04
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVLFV 312
D A +A AI+ + D++ IDTAGR+ +N+ LM L+K++ V N P + +
Sbjct: 167 DPASVAYRAIQESIKQNIDILFIDTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILI 226
Query: 313 GEALVGNEAVDQLVKFN 363
+A+ G +Q+ FN
Sbjct: 227 IDAVTGQNTYNQIEYFN 243
>UniRef50_O51103 Cluster: Cell division protein, putative; n=3;
Borrelia burgdorferi group|Rep: Cell division protein,
putative - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 281
Score = 46.0 bits (104), Expect = 5e-04
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK-----LIAV 285
V + + G D + + ++I A D ++IDTAGR+Q+ E L++ L K L +
Sbjct: 135 VRIISQNQGSDPSAVIFDSISSAKLKNYDALIIDTAGRLQNKENLIKELQKINNVILKQI 194
Query: 286 NEPD---TVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVG 456
D + V ++ +G A Q FN+A+ IDGI++TK D+ K G
Sbjct: 195 KNTDINYQKILVIDSTIGKNANSQAEIFNKAIE----------IDGIIITKLDS-SSKAG 243
Query: 457 AAISMTYI 480
++++ I
Sbjct: 244 TILNISKI 251
>UniRef50_A2STI3 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=2; Methanomicrobiales|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 446
Score = 46.0 bits (104), Expect = 5e-04
Identities = 34/107 (31%), Positives = 54/107 (50%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALV 327
KDA I + + D DV+++DTAGR + L+ + ++ A PD V +A +
Sbjct: 162 KDAVKIVKDGLAALKDV--DVIIVDTAGRHALEDDLIDEITQVNAYLNPDHRWLVIDAAL 219
Query: 328 GNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAIS 468
G A DQ +F++A+ IDG+++TK D K G A+S
Sbjct: 220 GQAARDQAKRFHEAIG----------IDGVIVTKMDG-TAKGGGAMS 255
>UniRef50_Q7VQG1 Cluster: 4.5S-RNP protein, GTP binding export
factor, part of signal recognition particle with 4.5
RNA; n=2; Candidatus Blochmannia|Rep: 4.5S-RNP protein,
GTP binding export factor, part of signal recognition
particle with 4.5 RNA - Blochmannia floridanus
Length = 457
Score = 45.6 bits (103), Expect = 6e-04
Identities = 32/108 (29%), Positives = 58/108 (53%)
Frame = +1
Query: 163 IAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAV 342
I +AI YA +V+++DTAG ++ + L + V P+ VLFV ++++G ++
Sbjct: 174 IVQKAIDYAKLNFYNVIVVDTAGCLKTDCNAFLELVDIYKVINPEEVLFVVDSMIGQGSI 233
Query: 343 DQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
D + F++ L+ + GIV+TK D + G A+S ++TG
Sbjct: 234 DIINMFDKNLS----------LTGIVVTKLDG-NACGGIALSAKFLTG 270
>UniRef50_Q6YPP6 Cluster: Signal recognition particle-docking
protein FtsY; n=2; Candidatus Phytoplasma asteris|Rep:
Signal recognition particle-docking protein FtsY - Onion
yellows phytoplasma
Length = 347
Score = 45.6 bits (103), Expect = 6e-04
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Frame = +1
Query: 157 AGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL---IAVNEPDTVL---FVGE 318
A + E I A D++L DTAGR+Q+ LM+ L+K+ I + P + L V +
Sbjct: 205 ASVIFEGIELAKSQNYDIILCDTAGRLQNKTNLMQELSKINRVICKHLPASNLQTFLVLD 264
Query: 319 ALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
A G A++Q+ FNQA +P + G +LTK D K G ++ Y+
Sbjct: 265 ATTGQNAINQVDLFNQA--------TP--LSGAILTKLDG-TSKGGIVFAIKYL 307
>UniRef50_Q60CH3 Cluster: Cytochrome oxidase assembly family
protein/cell division protein FtsY; n=6; Bacteria|Rep:
Cytochrome oxidase assembly family protein/cell division
protein FtsY - Methylococcus capsulatus
Length = 671
Score = 45.6 bits (103), Expect = 6e-04
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D+A + +A+ A D+++ DTAGR+ LM L+K+ + P VL
Sbjct: 523 GADSASVIYDAVEAARARGVDILIADTAGRLHTKSNLMEELSKIKRIIGRLDETAPHEVL 582
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V +A G A+ Q FN+A+ + G+VLTK D
Sbjct: 583 LVLDAGTGQNALSQARLFNEAVG----------LTGLVLTKLD 615
>UniRef50_Q0EZI9 Cluster: Signal recognition particle GTPase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Signal recognition
particle GTPase - Mariprofundus ferrooxydans PV-1
Length = 451
Score = 45.6 bits (103), Expect = 6e-04
Identities = 35/119 (29%), Positives = 58/119 (48%)
Frame = +1
Query: 130 YEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLF 309
Y +G G AA +A A+ A + V+++DTAGR ++ LM + ++ L
Sbjct: 157 YIEGAGATAAAMAASAVNEAGRSGYHVLILDTAGRQVVDDALMEEIREVAEQVRASERLL 216
Query: 310 VGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
V +A+ G A+ +F+ A+ + G +LTK D D + GAA+S+ TG
Sbjct: 217 VLDAMTGQTALSIAEQFHAAV----------TMTGCILTKTDA-DVRGGAALSVARSTG 264
>UniRef50_Q010M2 Cluster: Signal recognition particle 54kDa subunit;
n=2; Ostreococcus|Rep: Signal recognition particle 54kDa
subunit - Ostreococcus tauri
Length = 559
Score = 45.6 bits (103), Expect = 6e-04
Identities = 30/104 (28%), Positives = 51/104 (49%)
Frame = +1
Query: 157 AGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNE 336
A IA + + K D++++DT+GR + E L + ++ V +P +FV ++ +G
Sbjct: 228 AKIARGWVARFEEEKMDLIIVDTSGRHRQEEALFEEMREIANVTDPTMTIFVMDSSIGQS 287
Query: 337 AVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAIS 468
A DQ F +S + G+++TK D K G AIS
Sbjct: 288 AADQANAF----------ASTVDVGGVIMTKLDG-HAKGGGAIS 320
>UniRef50_O32861 Cluster: Cell division protein ftsY homolog; n=13;
Mycoplasma|Rep: Cell division protein ftsY homolog -
Mycoplasma hominis
Length = 351
Score = 45.6 bits (103), Expect = 6e-04
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVLFV 312
D A + AI A K D++++DTAGR+Q+ LM LAK+ V + P L V
Sbjct: 212 DPAAVVYRAIDIAKSKKYDILIVDTAGRLQNKVNLMNELAKINRVLASKIPDAPHESLLV 271
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A G V Q F + S+P + GI+LTK D
Sbjct: 272 LDATTGQNGVIQARVFKE--------STP--LTGIILTKMD 302
>UniRef50_P57137 Cluster: Cell division protein ftsY homolog; n=2;
Buchnera aphidicola|Rep: Cell division protein ftsY
homolog - Buchnera aphidicola subsp. Acyrthosiphon pisum
(Acyrthosiphon pisumsymbiotic bacterium)
Length = 378
Score = 45.6 bits (103), Expect = 6e-04
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D A + +A++ A K DV++IDTAGR+ + L+ L K++ V + P L
Sbjct: 241 GSDPAAVIFDAVKSAKSKKIDVLIIDTAGRLHNKLHLIEELKKIVRVIKKIDISAPHEKL 300
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+ ++ G + Q F++AL + GI++TK D
Sbjct: 301 LIIDSCNGQNTIQQTEIFHKALN----------LTGIIITKLD 333
>UniRef50_Q7MXM2 Cluster: Signal recognition particle-docking
protein FtsY; n=4; Bacteroidetes/Chlorobi group|Rep:
Signal recognition particle-docking protein FtsY -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 317
Score = 45.2 bits (102), Expect = 8e-04
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IA 282
V + ++ G D A +A + + A DVV+IDTAGR+ + LM L K+ +
Sbjct: 171 VPIIKQQMGSDPASVAYDTVSSAVANGVDVVIIDTAGRLHNKVNLMNELTKIKRVMQKVV 230
Query: 283 VNEPDTVLFVGEALVGNEAVDQLVKFNQA 369
+ P +L V + G A +Q +F A
Sbjct: 231 PDAPHEILLVLDGSTGQNAFEQARQFTAA 259
>UniRef50_A5US56 Cluster: Signal recognition particle-docking
protein FtsY; n=5; Chloroflexi (class)|Rep: Signal
recognition particle-docking protein FtsY - Roseiflexus
sp. RS-1
Length = 326
Score = 45.2 bits (102), Expect = 8e-04
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV----- 285
V + +G G D + +AI S+ DV++IDTAGR+ LM L KL +
Sbjct: 179 VPVISRGQGADPGAVVYDAIEAVSNGDVDVLIIDTAGRLHAKTNLMLELQKLRNIIRRRF 238
Query: 286 -NEPDTVLFVGEALVGNEAVDQLVKFNQAL 372
+ P VL V +A G V Q F +A+
Sbjct: 239 PDAPHEVLLVIDATTGQNGVLQAKSFLKAV 268
>UniRef50_Q57565 Cluster: Signal recognition 54 kDa protein; n=13;
Archaea|Rep: Signal recognition 54 kDa protein -
Methanococcus jannaschii
Length = 451
Score = 45.2 bits (102), Expect = 8e-04
Identities = 19/63 (30%), Positives = 37/63 (58%)
Frame = +1
Query: 199 KTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALAD 378
K DV++IDTAGR ++ + L+ + ++ + PD ++ V + +G +A Q F +A+ +
Sbjct: 181 KADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKEAVGE 240
Query: 379 YSS 387
S
Sbjct: 241 IGS 243
>UniRef50_Q1NXJ3 Cluster: Cell division transporter
substrate-binding protein FtsY; n=4; Bacteria|Rep: Cell
division transporter substrate-binding protein FtsY -
delta proteobacterium MLMS-1
Length = 373
Score = 44.8 bits (101), Expect = 0.001
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D + + +A YA DV+++DTAGR+ LM L K+ V P V+
Sbjct: 232 GADPSSVIYDAFDYARPRDFDVIIVDTAGRLHTKVNLMEELRKVKRVMSKKIPGAPHEVM 291
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V +A G + Q F+QA+ + GI LTK D
Sbjct: 292 LVIDATTGQNGISQAKLFHQAVD----------VSGIALTKLD 324
>UniRef50_Q9RS67 Cluster: Signal recognition particle-docking
protein FtsY; n=2; Deinococcus|Rep: Signal recognition
particle-docking protein FtsY - Deinococcus radiodurans
Length = 317
Score = 44.4 bits (100), Expect = 0.001
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D A +A +A TD++ +DTAGR+ + LM L K+ V EP V
Sbjct: 174 GGDPAAVAFDAAGARKARGTDLLFVDTAGRLHNKHNLMEELKKVRRVIDKADPGEPAEVW 233
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V +A+ G + Q KF++A +P + G+V+TK D
Sbjct: 234 LVLDAVTGQNGLQQAKKFHEA--------TP--LTGVVVTKLD 266
>UniRef50_Q7VRI6 Cluster: Cell division protein FtsY; n=1;
Candidatus Blochmannia floridanus|Rep: Cell division
protein FtsY - Blochmannia floridanus
Length = 308
Score = 44.4 bits (100), Expect = 0.001
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IAVNEPDTVLFV 312
D+A I A++ A ++++IDTAGR+Q+N ++ L K+ I N P + V
Sbjct: 172 DSASIIFNAMQKALSQNINILIIDTAGRLQNNIHNIQELQKIQQTIKKIQPNAPHETILV 231
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMT 474
++ +G +++QL F+ + I GI++TK D K G +S++
Sbjct: 232 LDSNIGQNSINQLKTFHSTI----------TITGIIMTKLDG-SSKGGVLLSIS 274
>UniRef50_A0C5I7 Cluster: Chromosome undetermined scaffold_15, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_15,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 436
Score = 44.4 bits (100), Expect = 0.001
Identities = 30/121 (24%), Positives = 52/121 (42%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V Y + D + ++ D++LIDT G+ + L + + ++ + +PD
Sbjct: 156 VLFYGSYFESDPVNATQDGVQIFKKEGIDIILIDTVGKYEKETDLCKEMKQMEYMIQPDN 215
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
++FV ++ +G DQ+ F A S I++TK D K G AIS
Sbjct: 216 IIFVMDSSIGQICQDQVFVFKSAFNQGS----------IIITKVDR-HSKGGGAISAVVA 264
Query: 481 T 483
T
Sbjct: 265 T 265
>UniRef50_P20424 Cluster: Signal recognition particle subunit SRP54;
n=27; Fungi/Metazoa group|Rep: Signal recognition
particle subunit SRP54 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 541
Score = 44.4 bits (100), Expect = 0.001
Identities = 32/111 (28%), Positives = 54/111 (48%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D A +A E I K D++++DT+GR E L + + ++ V +P+ + V +A +G
Sbjct: 175 DPAKVAEEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIG 234
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
A Q F ++ +D+ + I+LTK D + G AIS T
Sbjct: 235 QAAEQQSKAFKES-SDFGA---------IILTKMDG-HARGGGAISAVAAT 274
>UniRef50_O51637 Cluster: Signal recognition particle protein; n=4;
Borrelia|Rep: Signal recognition particle protein -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 447
Score = 44.0 bits (99), Expect = 0.002
Identities = 28/111 (25%), Positives = 55/111 (49%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALV 327
KD I ++++A D V++DT GR++ L+ + K+ + P + V ++++
Sbjct: 169 KDPIKIVKASMKFAESNFFDSVIVDTRGRLEIESLLVEEIKKIKGILRPAETILVVDSMM 228
Query: 328 GNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
G AV+ +FN+ + + G + +KFD+ D + GA +S I
Sbjct: 229 GQVAVNIAKEFNENVG----------LTGAIFSKFDS-DTRGGAVLSFKSI 268
>UniRef50_A6T2T2 Cluster: Signal recognition particle receptor;
n=59; Betaproteobacteria|Rep: Signal recognition
particle receptor - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 419
Score = 44.0 bits (99), Expect = 0.002
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVLFV 312
D A +A +A+ A T+VV++DTAGR+ LM L K+ V + P +L +
Sbjct: 284 DPAAVAFDAVHSAQARGTNVVMVDTAGRLPTQLHLMEELKKVKRVMAKGMASAPHEILLI 343
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD-TIDDKVGAAIS 468
+ G A+ Q+ F+ AL + G+V+TK D T V AAI+
Sbjct: 344 IDGNTGQNALTQVKAFDDALG----------LTGLVVTKLDGTAKGGVLAAIA 386
>UniRef50_A6DTV8 Cluster: Fused Signal Recognition Particle (SRP)
receptor: membrane binding protein/conserved protein;
n=2; Lentisphaerae|Rep: Fused Signal Recognition
Particle (SRP) receptor: membrane binding
protein/conserved protein - Lentisphaera araneosa
HTCC2155
Length = 311
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +1
Query: 142 YGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTV 303
+G DAA IA +A A D ++IDTAGR + LM L K++ V P
Sbjct: 166 HGSDAAAIAYDACASAKAKNVDYLIIDTAGRQHTRQDLMEELPKILRVIRKNFPEAPHET 225
Query: 304 LFVGEALVGNEAVDQLVKFNQA 369
+ V + G A+ Q +F +A
Sbjct: 226 VLVVDGSTGTNALFQAREFGKA 247
>UniRef50_A3YMT1 Cluster: Signal recognition particle-docking
protein FtsY; n=9; Campylobacter jejuni|Rep: Signal
recognition particle-docking protein FtsY -
Campylobacter jejuni subsp. jejuni CF93-6
Length = 288
Score = 44.0 bits (99), Expect = 0.002
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNE------PDTVL 306
G D + +A + I A D V+IDTAGR+Q+ + L L K++ ++ P +
Sbjct: 147 GHDPSAVAFDTISKAKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKI 206
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
V + GN + Q FN+ + +DG+++TK D
Sbjct: 207 LVLDGTQGNAGILQAKAFNELVK----------LDGVIITKLD 239
>UniRef50_Q89B28 Cluster: Cell division protein ftsY homolog; n=1;
Buchnera aphidicola (Baizongia pistaciae)|Rep: Cell
division protein ftsY homolog - Buchnera aphidicola
subsp. Baizongia pistaciae
Length = 397
Score = 44.0 bits (99), Expect = 0.002
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL-IAVNEPD 297
V++ + G D A + +AI+ A D+++IDTAGR+ + LM L K+ +++ D
Sbjct: 247 VSVITREIGSDPASVVYDAIKIAKLKCIDILIIDTAGRLHNKNNLMEELKKIKRVIHKID 306
Query: 298 T-----VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDT 438
+ + V +A +G ++ Q+ F+++L + G+V+TK D+
Sbjct: 307 STISQETMLVLDACIGQNSIKQVKIFHESLN----------VTGLVITKLDS 348
>UniRef50_Q7UT17 Cluster: Cell division protein FtsY; n=2;
Planctomycetaceae|Rep: Cell division protein FtsY -
Rhodopirellula baltica
Length = 337
Score = 43.6 bits (98), Expect = 0.002
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G D A +A + A + D +IDTAGR+Q LM+ L K+ V P VL
Sbjct: 199 GVDPASVAYQTTEKAVEIGADYAIIDTAGRLQTQGKLMQELEKIRRVIDKKLPGAPHEVL 258
Query: 307 FVGEALVGNEAVDQLVKFNQA 369
V +A G A+ Q F+ A
Sbjct: 259 LVLDATAGQNAISQAKGFSNA 279
>UniRef50_Q7VPR9 Cluster: FtsY cell division protein; n=8;
Chlamydiaceae|Rep: FtsY cell division protein -
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Length = 310
Score = 43.6 bits (98), Expect = 0.002
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G DAA IA + I+ A V+IDT+GR+ + LM+ L+K+++V P +
Sbjct: 168 GGDAAAIAFDGIQSAIARGYSRVIIDTSGRLHVHGNLMKELSKIVSVCGKALEGAPHEIF 227
Query: 307 FVGEALVGNEAVDQLVKFNQAL 372
++ +GN A++Q+ F+ +
Sbjct: 228 MTVDSTLGNNAIEQVRVFHDVV 249
>UniRef50_Q8SS36 Cluster: SIGNAL RECOGNITION PARTICLE 54kDa SUBUNIT;
n=1; Encephalitozoon cuniculi|Rep: SIGNAL RECOGNITION
PARTICLE 54kDa SUBUNIT - Encephalitozoon cuniculi
Length = 466
Score = 43.2 bits (97), Expect = 0.003
Identities = 30/111 (27%), Positives = 50/111 (45%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D +A + + +++L+DT+GR L + +I P +++FV +A +G
Sbjct: 164 DPVKVASAGVERFRKERFELILVDTSGRHTQETELFTEMKDIIREISPSSIVFVMDAGIG 223
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
A DQ + F +A+ + I+LTK D K G AIS T
Sbjct: 224 QSAEDQAMGFKRAVD----------VGSIILTKIDG-TTKAGGAISSVAAT 263
>UniRef50_Q9HMN5 Cluster: Signal recognition 54 kDa protein; n=14;
Euryarchaeota|Rep: Signal recognition 54 kDa protein -
Halobacterium salinarium (Halobacterium halobium)
Length = 460
Score = 43.2 bits (97), Expect = 0.003
Identities = 31/105 (29%), Positives = 50/105 (47%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V Y + D IA + + +D DV ++DTAGR + L+ + ++ V EPD
Sbjct: 153 VDFYGEPDSDDPVQIARDGLAATADA--DVHIVDTAGRHALEDDLIAEIEEIEGVVEPDR 210
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
L V +A +G A Q +F+ ++ IDG+ +TK D
Sbjct: 211 SLLVLDAAIGQGAKQQARQFDASIG----------IDGVAITKLD 245
>UniRef50_P14929 Cluster: Cell division protein ftsY homolog; n=28;
Neisseria|Rep: Cell division protein ftsY homolog -
Neisseria gonorrhoeae
Length = 416
Score = 43.2 bits (97), Expect = 0.003
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV----- 285
VT+ + G D+A + +A++ A+ + D+VL DTAGR+ LM + K+ V
Sbjct: 273 VTVISQTTG-DSAAVCFDAVQ-AAKARIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAI 330
Query: 286 -NEPDTVLFVGEALVGNEAVDQLVKFNQAL 372
P ++ V +A +G AV+Q+ F+ AL
Sbjct: 331 PGAPHEIIVVLDANIGQNAVNQVKAFDDAL 360
>UniRef50_Q9PR03 Cluster: SRP family of GTP-binding proteins-cell
division protein; n=2; Mycoplasmataceae|Rep: SRP family
of GTP-binding proteins-cell division protein -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 351
Score = 42.7 bits (96), Expect = 0.004
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G+D A + ++ + K D+V+ DT+GR+Q+ LM L K+ V P L
Sbjct: 207 GQDPASVIYAGVKKGYEQKYDLVICDTSGRLQNKINLMNELKKIHDVIHKFDEYAPHETL 266
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDT 438
V +A G ++Q FN+ I GI+LTK D+
Sbjct: 267 LVLDATQGQSGINQAKAFNEVTK----------ISGIILTKMDS 300
>UniRef50_Q315N5 Cluster: Signal recognition particle-docking
protein FtsY; n=4; Desulfovibrionaceae|Rep: Signal
recognition particle-docking protein FtsY -
Desulfovibrio desulfuricans (strain G20)
Length = 506
Score = 42.7 bits (96), Expect = 0.004
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Frame = +1
Query: 130 YEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NE 291
+ KG D A +A EA+ A D++ +DTAGR+ LM L K+ V
Sbjct: 362 HSKGANADPAAVAYEAMDKAVKEGYDILFVDTAGRIHTKVNLMEELQKIRGVLGKKHPGA 421
Query: 292 PDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD-TIDDKVGAAIS 468
P + V +A G A+ Q F+++ +D IVLTK D T + A++
Sbjct: 422 PHRSILVIDATTGQNALSQTRLFDESCK----------LDEIVLTKLDGTAKGGIVVAVA 471
Query: 469 MTY 477
M +
Sbjct: 472 MQF 474
>UniRef50_Q1ILB3 Cluster: Signal recognition particle-docking
protein FtsY; n=6; Bacteria|Rep: Signal recognition
particle-docking protein FtsY - Acidobacteria bacterium
(strain Ellin345)
Length = 320
Score = 42.3 bits (95), Expect = 0.006
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IAVNEPDTVL 306
G D + + +A++ A D V++DTAGR+ + LM L K+ + P VL
Sbjct: 183 GGDPSAVLFDALQAAKARAVDYVIVDTAGRLHTKQNLMLELEKMKRTAQKFIPSAPHEVL 242
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD-TIDDKVGAAIS 468
V +A G + Q F ++ + GIVLTK D T V AIS
Sbjct: 243 LVMDATTGQNGLQQAKLFTESAG----------VTGIVLTKLDGTAKGGVVVAIS 287
>UniRef50_Q0IE72 Cluster: Signal recognition particle-docking
protein FtsY; n=21; Cyanobacteria|Rep: Signal
recognition particle-docking protein FtsY -
Synechococcus sp. (strain CC9311)
Length = 551
Score = 42.3 bits (95), Expect = 0.006
Identities = 31/95 (32%), Positives = 47/95 (49%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D A + +AI A TD+VL+DTAGR+Q LM L K+ V + E+L+
Sbjct: 414 DPAAVVFDAIGAARSKGTDLVLVDTAGRLQTKHNLMEELEKIRRVVDRLAPEAHVESLLV 473
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A QA+A ++ + G+V+TK D
Sbjct: 474 LDASQGQNGLKQAMAFARAAG----LTGVVITKLD 504
>UniRef50_A7TKC3 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 577
Score = 41.9 bits (94), Expect = 0.007
Identities = 31/111 (27%), Positives = 53/111 (47%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D +A E I K D++++DT+GR + E L + + ++ +P+ + V +A +G
Sbjct: 177 DPVRVASEGIAKFKKEKFDIIIVDTSGRHRQEEQLFQEMIEISNEIKPNQTIMVLDASIG 236
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
A Q F ++ +D+ + I+LTK D K G AIS T
Sbjct: 237 QAAEQQSKAFKES-SDFGA---------IILTKMDG-HAKGGGAISAVAAT 276
>UniRef50_Q5PAC1 Cluster: Signal recognition particle protein; n=14;
Rickettsiales|Rep: Signal recognition particle protein -
Anaplasma marginale (strain St. Maries)
Length = 451
Score = 41.5 bits (93), Expect = 0.010
Identities = 29/108 (26%), Positives = 55/108 (50%)
Frame = +1
Query: 163 IAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAV 342
IA A++ A DVV++DTAGR+ ++ ++ L + P+ + V + ++G +AV
Sbjct: 170 IAKRAMKEAKRGGYDVVIVDTAGRLHIDQEMIGELQLVKKEVSPNETILVVDCMMGQDAV 229
Query: 343 DQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+ + F+ L + G + T+ D D + GA +SM ++G
Sbjct: 230 EVVRGFHDKLN----------LTGTIFTRADG-DSRGGAILSMKMVSG 266
>UniRef50_A7D784 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Halorubrum lacusprofundi ATCC
49239|Rep: GTP-binding signal recognition particle
SRP54, G-domain - Halorubrum lacusprofundi ATCC 49239
Length = 484
Score = 41.5 bits (93), Expect = 0.010
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT 300
V Y D IA E + +D DV ++DTAGR + L+ + ++ +PD
Sbjct: 173 VDFYGDPDNDDPVAIAREGLEATADA--DVHIVDTAGRHALEDDLIAEIEEIERAVDPDR 230
Query: 301 VLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
L V +A +G A +Q +F +++ I+G+++TK D
Sbjct: 231 SLLVLDAAIGQGAKEQARQFEKSIG----------IEGVMITKLD 265
>UniRef50_Q7NP07 Cluster: Glr0251 protein; n=7; Cyanobacteria|Rep:
Glr0251 protein - Gloeobacter violaceus
Length = 774
Score = 41.1 bits (92), Expect = 0.013
Identities = 30/107 (28%), Positives = 54/107 (50%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D A + +AI A +++L+DTAGR+Q+ + LM LAK+ + + + E+L+
Sbjct: 634 DPAAVVFDAISAAKARDVELLLVDTAGRLQNKKNLMDELAKVRRIIDKQAIDAHIESLLV 693
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISM 471
+A QA ++ + G+V+TK D K G A+++
Sbjct: 694 LDATTGQNGLQQAKVFGETAG----LTGVVITKLDG-SAKAGIALAI 735
>UniRef50_Q1AW79 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Rubrobacter xylanophilus DSM
9941|Rep: Signal recognition particle-docking protein
FtsY - Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129)
Length = 348
Score = 41.1 bits (92), Expect = 0.013
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV------NEPDTVL 306
G DAA +A +A+ A +V+++DTAGR+ LM L K+ V P VL
Sbjct: 209 GADAAAVAHDAVEAAKREGVEVLIVDTAGRLHTKVNLMAELEKVRRVIGRQLPGAPHEVL 268
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A G + Q F + + G+VLTK D
Sbjct: 269 LTVDATTGQNGLRQARMFKEVAG----------VTGVVLTKLD 301
>UniRef50_P73930 Cluster: Cell division protein ftsY homolog; n=10;
Cyanobacteria|Rep: Cell division protein ftsY homolog -
Synechocystis sp. (strain PCC 6803)
Length = 504
Score = 41.1 bits (92), Expect = 0.013
Identities = 31/111 (27%), Positives = 53/111 (47%)
Frame = +1
Query: 139 GYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGE 318
G D A + + I A +++L+DTAGR+Q+ + LM LAK+ + + E
Sbjct: 364 GQNTDPAAVVYDGISAAQSRNVNLLLVDTAGRLQNKKNLMDELAKIRRIIDKKAPNATVE 423
Query: 319 ALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISM 471
+L+ +D + N L + + G+VLTK D K G A+++
Sbjct: 424 SLL---VLDATLGQN-GLRQAEVFAEAAKLSGVVLTKLDG-SAKGGVALAV 469
>UniRef50_O33010 Cluster: Cell division protein ftsY homolog; n=9;
Actinobacteria (class)|Rep: Cell division protein ftsY
homolog - Mycobacterium leprae
Length = 430
Score = 41.1 bits (92), Expect = 0.013
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV----NEPDTVLFV 312
G D A +A +A+ DVV+IDTAGR+ LM L K+ V D VL V
Sbjct: 295 GADPASVAFDAVDKGIGAGADVVVIDTAGRLHTKVGLMDELDKIKRVVTRRAAVDEVLLV 354
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A +G + Q+ F + + I G VLTK D
Sbjct: 355 LDATIGQNGLTQVRVFAEVVD----------ITGAVLTKLD 385
>UniRef50_P66843 Cluster: Cell division protein ftsY homolog; n=43;
Actinomycetales|Rep: Cell division protein ftsY homolog
- Mycobacterium bovis
Length = 422
Score = 41.1 bits (92), Expect = 0.013
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAV----NEPDTVLFV 312
G D A +A +A+ DVVLIDTAGR+ LM L K+ V D VL V
Sbjct: 287 GADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRRASVDEVLLV 346
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A +G + Q F + + I G VLTK D
Sbjct: 347 LDATIGQNGLAQARVFAEVVD----------ISGAVLTKLD 377
>UniRef50_Q74IQ0 Cluster: Signal recognition particle receptor FtsY;
n=5; Lactobacillales|Rep: Signal recognition particle
receptor FtsY - Lactobacillus johnsonii
Length = 443
Score = 40.7 bits (91), Expect = 0.017
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IAVNEPDTVLFV 312
D A + ++ A + D +L+DTAGR+Q+ LM L K+ I ++P+ VL V
Sbjct: 305 DPASVVYNGVKKAKERGIDFLLVDTAGRLQNKVNLMSELDKIKRTIKKILPDQPNEVLLV 364
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+ G A+ Q F++ + G+VLTK D
Sbjct: 365 LDGSTGQNALLQAKDFDKTTK----------LTGLVLTKLD 395
>UniRef50_Q7R3W6 Cluster: GLP_68_88884_87292; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_68_88884_87292 - Giardia lamblia
ATCC 50803
Length = 530
Score = 39.9 bits (89), Expect = 0.030
Identities = 18/75 (24%), Positives = 40/75 (53%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALV 327
KD IA + +++ +++++DT+GR + E L + + + +P +FV ++ +
Sbjct: 168 KDPVQIAQDGVKHFVSLNFELIILDTSGRHRQEEALFTEMKLIDSAVQPHDHVFVLDSSI 227
Query: 328 GNEAVDQLVKFNQAL 372
G A +Q F+ A+
Sbjct: 228 GQAAYEQADAFSNAV 242
>UniRef50_O25458 Cluster: Cell division protein ftsY homolog; n=17;
Epsilonproteobacteria|Rep: Cell division protein ftsY
homolog - Helicobacter pylori (Campylobacter pylori)
Length = 293
Score = 39.5 bits (88), Expect = 0.039
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IAVNEPDTVL 306
G D + +A I A D V IDTAGR+ + L L+K+ + + P
Sbjct: 150 GSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKF 209
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTY 477
+ + G+ + Q F++ LA +DG+++TK D K GA +S+ Y
Sbjct: 210 LILDGTQGSSGLTQAKIFHETLA----------LDGVIMTKLDG-TSKGGAILSVLY 255
>UniRef50_Q8C1Y6 Cluster: Colon RCB-0549 Cle-H3 cDNA, RIKEN
full-length enriched library, clone:G430060P17
product:signal recognition particle 54 kDa, full insert
sequence; n=17; Eukaryota|Rep: Colon RCB-0549 Cle-H3
cDNA, RIKEN full-length enriched library,
clone:G430060P17 product:signal recognition particle 54
kDa, full insert sequence - Mus musculus (Mouse)
Length = 502
Score = 39.1 bits (87), Expect = 0.052
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D IA E + + +++++DT+GR Q + L + ++ +PD +++V +A +G
Sbjct: 167 DPVIIASEGVEKFQNENFEIIIVDTSGRHQQEDSLFEEMLQVSNAIQPDNIVYVMDASIG 226
Query: 331 NEAVDQLVKF 360
Q F
Sbjct: 227 QACEAQAKAF 236
>UniRef50_Q6MNR5 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Bdellovibrio bacteriovorus|Rep:
Signal recognition particle-docking protein FtsY -
Bdellovibrio bacteriovorus
Length = 402
Score = 39.1 bits (87), Expect = 0.052
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IAVNEPDTVLFV 312
D + +A +A+ DVV++DTAGR+ LM + K+ + P L V
Sbjct: 267 DPSAVAFDAVAKGKAQGYDVVIVDTAGRLHTQANLMEEIKKMKRVMSKVIPEAPHETLIV 326
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISM 471
+A G A+ Q +F+ AL + G VLTK D K G A+ +
Sbjct: 327 LDANSGQNALMQAKEFHNAL----------TLTGAVLTKMDG-TAKGGVAVGL 368
>UniRef50_A6GK47 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Plesiocystis pacifica SIR-1|Rep:
Signal recognition particle-docking protein FtsY -
Plesiocystis pacifica SIR-1
Length = 592
Score = 39.1 bits (87), Expect = 0.052
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL--IAVN---------EPD 297
D + + + I D D+VL DTAGR+ + LM LAK+ A EP
Sbjct: 442 DPSSVLFDGITRGRDEGYDIVLCDTAGRLHTRKELMAELAKMGRAATKALSKGRDEVEPH 501
Query: 298 TVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+ V +A +G A+ Q F + +A G+VLTK D
Sbjct: 502 DIFLVLDATIGQNALAQAQMFKETMA----------FSGLVLTKLD 537
>UniRef50_A7PXY2 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 367
Score = 39.1 bits (87), Expect = 0.052
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Frame = +1
Query: 136 KGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLM-------RALAKLIAVNEP 294
+G A+ + +A++ + D+VL DT+GR+ N LM +A+ K+++ P
Sbjct: 227 EGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELIACKKAVGKVVS-GAP 285
Query: 295 DTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+ +L V + G + Q +FN+ + I G++LTK D
Sbjct: 286 NEILLVLDGTTGLNMLPQAREFNEVVG----------ISGLILTKLD 322
>UniRef50_Q1VJW0 Cluster: Cell division particle; n=2; Psychroflexus
torquis ATCC 700755|Rep: Cell division particle -
Psychroflexus torquis ATCC 700755
Length = 208
Score = 38.7 bits (86), Expect = 0.069
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAK 273
V + + D A +A + +A + DV LIDTAGR+Q+ + LM K
Sbjct: 158 VDIIKSEINSDPASVAFKTAEFAKKNEIDVALIDTAGRLQNKKNLMEEYKK 208
>UniRef50_Q6CRH5 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=8; Fungi/Metazoa group|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 530
Score = 38.7 bits (86), Expect = 0.069
Identities = 27/102 (26%), Positives = 50/102 (49%)
Frame = +1
Query: 163 IAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAV 342
+A + + K +++++DT+GR Q + L + + ++ +P + V +A +G A
Sbjct: 177 VAKDGVDKFKKEKFEIIIVDTSGRHQQEDSLFQEMVEISQAVKPKQTIMVLDASIGQAAE 236
Query: 343 DQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAIS 468
Q F ++ AD+ S I+LTK D + G AIS
Sbjct: 237 HQSKAFKES-ADFGS---------IILTKMDG-HARGGGAIS 267
>UniRef50_Q97QH0 Cluster: Signal recognition particle-docking
protein FtsY; n=20; Firmicutes|Rep: Signal recognition
particle-docking protein FtsY - Streptococcus pneumoniae
Length = 429
Score = 38.3 bits (85), Expect = 0.091
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IAVNEPDTVLFV 312
D A + + + A D+++IDTAGR+Q+ + LM L K+ + P
Sbjct: 291 DPASVVFDGMERAVTEGIDILMIDTAGRLQNKDNLMAELEKIGRIIKRVVPEAPHETFLA 350
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+A G A+ Q +F S +P + GIVLTK D
Sbjct: 351 LDASTGQNALVQAKEF--------SKITP--LTGIVLTKID 381
>UniRef50_Q9SWS7 Cluster: Chloroplast SRP receptor homolog, alpha
subunit CPFTSY; n=6; Magnoliophyta|Rep: Chloroplast SRP
receptor homolog, alpha subunit CPFTSY - Arabidopsis
thaliana (Mouse-ear cress)
Length = 366
Score = 38.3 bits (85), Expect = 0.091
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Frame = +1
Query: 154 AAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLM-------RALAKLIAVNEPDTVLFV 312
AA + +A++ + DVVL DT+GR+ N LM +A+ K+++ P+ +L V
Sbjct: 232 AATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVS-GAPNEILLV 290
Query: 313 GEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+ G + Q +FN+ + I G++LTK D
Sbjct: 291 LDGNTGLNMLPQAREFNEVVG----------ITGLILTKLD 321
>UniRef50_Q9HKT0 Cluster: Signal recognition 54 kDa protein; n=4;
Thermoplasmatales|Rep: Signal recognition 54 kDa protein
- Thermoplasma acidophilum
Length = 456
Score = 37.9 bits (84), Expect = 0.12
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +1
Query: 136 KGYGKDAAGIAMEAIRYASDTKTDVV--LIDTAGRMQDNEPLMRALAKLIAVNEPDTVLF 309
K YG + + I++ + DV +IDT+GR + L + ++ PD VL
Sbjct: 154 KFYGDQSEKDPVRLIKHGLEQLKDVAVKIIDTSGRDSMDAELFDEIRRIKEAVAPDEVLM 213
Query: 310 VGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAIS 468
+ +A +G +A + FN A+ + GI++TK D K G A+S
Sbjct: 214 IIDATMGQQAGPEAKAFNDAIG----------VTGIIITKMDG-TAKGGGALS 255
>UniRef50_P61011 Cluster: Signal recognition particle 54 kDa
protein; n=37; Eukaryota|Rep: Signal recognition
particle 54 kDa protein - Homo sapiens (Human)
Length = 504
Score = 37.9 bits (84), Expect = 0.12
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D IA E + + +++++DT+GR + + L + ++ +PD +++V +A +G
Sbjct: 167 DPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIG 226
Query: 331 NEAVDQLVKF 360
Q F
Sbjct: 227 QACEAQAKAF 236
>UniRef50_Q649P3 Cluster: Dihydropteroate synthase; n=1; uncultured
archaeon GZfos34H9|Rep: Dihydropteroate synthase -
uncultured archaeon GZfos34H9
Length = 502
Score = 37.5 bits (83), Expect = 0.16
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLID-TAGRMQDNEPLMRALAKLIAVNEPDTVLFVG 315
GK+AAG+ EAI+ + K DV+ D + L RAL K+ +PD +L G
Sbjct: 10 GKEAAGMVTEAIKSVTSVKCDVLTQDINIAAFSTPKSLKRALEKIYRSEKPDLILVSG 67
>UniRef50_Q4PB16 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 638
Score = 37.1 bits (82), Expect = 0.21
Identities = 30/111 (27%), Positives = 49/111 (44%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D I+ + + +V+++DT+GR + + L + ++ PD + V +A +G
Sbjct: 194 DPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREIDTAVTPDLTIMVLDANIG 253
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
A Q F QA A Y + I++TK D K G AIS T
Sbjct: 254 QAAEAQSRAFKQA-AGYGA---------IIVTKLDG-HAKGGGAISAVAAT 293
>UniRef50_UPI00006CE525 Cluster: SRP54-type protein, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: SRP54-type protein, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 460
Score = 36.7 bits (81), Expect = 0.28
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D IA+E ++ +V++IDT+GR L + ++ + P+ +FV + G
Sbjct: 165 DPVAIAIEGVKTFQKQNFEVIIIDTSGRHMQESELFDEMKQIYSAVCPNECIFVMDGSNG 224
Query: 331 NEAVDQLVKFNQAL 372
++Q F +A+
Sbjct: 225 QACLNQAQAFKKAV 238
>UniRef50_Q6BNS1 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=4;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 568
Score = 36.3 bits (80), Expect = 0.37
Identities = 16/73 (21%), Positives = 34/73 (46%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D +A E + K D++++DT+GR + + L + ++ + P + V + +G
Sbjct: 186 DPVKVAYEGVVKFKQEKFDIIIVDTSGRHKQEQSLFNEMIQISEMIVPTQTIMVMDGSIG 245
Query: 331 NEAVDQLVKFNQA 369
A Q F ++
Sbjct: 246 QAAESQAKAFKES 258
>UniRef50_Q0UIN8 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 252
Score = 36.3 bits (80), Expect = 0.37
Identities = 26/92 (28%), Positives = 42/92 (45%)
Frame = +1
Query: 196 TKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALA 375
TK DV ++DT ++QD A L+ N D F + + DQL + L+
Sbjct: 3 TKGDVEMVDTTAKLQDPNDY----ADLLQTNHSDAFAFSETEKLALQLYDQLKELELELS 58
Query: 376 DYSSSSSPHVIDGIVLTKFDTIDDKVGAAISM 471
+ S HV+D L+ DD++ A ++M
Sbjct: 59 LLQAQQSAHVVDSSELS-----DDELQAQLTM 85
>UniRef50_Q9AAK0 Cluster: Chemotaxis response regulator
protein-glutamate methylesterase of group 2 operon; n=2;
Alphaproteobacteria|Rep: Chemotaxis response regulator
protein-glutamate methylesterase of group 2 operon -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 347
Score = 36.3 bits (80), Expect = 0.37
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Frame = +1
Query: 118 MVTLYEKGYGKDAAGIAME---AIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVN 288
MVT + + G A IA++ A+R +DT DV L+D + + AL KL+A
Sbjct: 15 MVTRWLEEAGFIIAAIAVDGGQALRKLADTSVDVCLLDIEMPVMSG---LEALPKLLAA- 70
Query: 289 EPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTID 444
+PD + + L A L + ADY + S + + G L + D I+
Sbjct: 71 KPDLRVIMASTLTERGAEVTLRALDLGAADYIAKPSANKLGGADLYRKDLIE 122
>UniRef50_A1V7R2 Cluster: Dipeptide transport system permease
protein; n=3; Burkholderia mallei|Rep: Dipeptide
transport system permease protein - Burkholderia mallei
(strain SAVP1)
Length = 241
Score = 35.9 bits (79), Expect = 0.49
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 50 SSCARTRDTSTRCTRPRATTHDTWSRSTR 136
S+C+R R + RC+RPRATT T S+R
Sbjct: 207 SACSRRRPSGARCSRPRATTSTTHGGSSR 235
>UniRef50_A2DJ16 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 671
Score = 35.9 bits (79), Expect = 0.49
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +1
Query: 169 MEAIRYASDTKTDVVLIDTAGRMQDNEPLM-RALAKLIAVNEPDTVLFVG--EALVGNEA 339
+ +RYA+ K+ + L+++AG E ++ R + IA+N D L V E L E
Sbjct: 332 LNPLRYANSLKS-IQLLESAGCQLTKEIILERKFLETIAINTKDKSLLVNLLEKLDNIEE 390
Query: 340 VDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+D+ + F + +Y+ S I I++ +F+
Sbjct: 391 IDKNMLFTNLINNYNGGSVSDEIVDILIRRFE 422
>UniRef50_Q2GDM3 Cluster: Signal recognition particle protein; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: Signal
recognition particle protein - Neorickettsia sennetsu
(strain Miyayama)
Length = 449
Score = 35.5 bits (78), Expect = 0.64
Identities = 23/94 (24%), Positives = 49/94 (52%)
Frame = +1
Query: 205 DVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYS 384
DV+++DTAGR Q + LM L + +P + V +A++G ++++ F+ +
Sbjct: 187 DVLMVDTAGRSQIDSVLMEELKVIKNRLQPSEIFQVLDAMMGQDSLNVARTFHSEIG--- 243
Query: 385 SSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
G+++++ D+ D +VG+ +S+ G
Sbjct: 244 -------TTGVIVSRLDS-DARVGSVLSVRQSVG 269
>UniRef50_UPI0000F2BF27 Cluster: PREDICTED: similar to hCG2041257;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG2041257 - Monodelphis domestica
Length = 915
Score = 35.1 bits (77), Expect = 0.85
Identities = 30/104 (28%), Positives = 47/104 (45%)
Frame = -2
Query: 461 AAPTLSSIVSNLVSTIPSMTCGLLDEL*SARAWLNLTSWSTASFPTRASPTKSTVSGSLT 282
A+PT S++ S ++ T ++ + + TS ST + + ASPT ST++ T
Sbjct: 571 ASPTASTLTSGSTASTSGSTASPTASTLTSGSTAS-TSGSTLTSGSTASPTASTLTSGST 629
Query: 281 AMSLARARIRGSLSCIRPAVSMSTTSVLVSDAYRIASIAMPAAS 150
A A GS++ + + T S L S S A P AS
Sbjct: 630 ASPTASTLTSGSIASTSGSTASPTASTLTS-----GSTASPIAS 668
Score = 34.3 bits (75), Expect = 1.5
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = -2
Query: 356 LTSWSTASFP-TRASPTKSTVSGSLTAMSLARARIRGSLSCIRPAVSMSTTSVLVS---- 192
LTS STAS + ASPT ST++ TA A GS++ + + T S L S
Sbjct: 703 LTSGSTASTSGSTASPTASTLTSGSTASPTASTLTSGSIASTSGSTASPTASTLTSGSTA 762
Query: 191 --DAYRIASIAMPAASLPYP 138
A + S++ P++S P
Sbjct: 763 SPTASTLTSVSRPSSSSSAP 782
>UniRef50_Q03NW2 Cluster: Predicted membrane protein; n=1;
Lactobacillus brevis ATCC 367|Rep: Predicted membrane
protein - Lactobacillus brevis (strain ATCC 367 / JCM
1170)
Length = 999
Score = 35.1 bits (77), Expect = 0.85
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = -2
Query: 470 IDMAAPTLSSIVSNLVSTIPSMTCGLLDEL*SARAWLNLTSWSTASFPTRASPTKST-VS 294
I+ + TLSS+ +N ++ +P+M L ++ + + T S AS T ++ T +T S
Sbjct: 384 INSSLQTLSSLDTNSLAQLPAMQKQLTSDVVAIKV-AQATKGSGASSSTASTSTTTTGNS 442
Query: 293 GSLTAMSLARARIRGSLSCIRPAVSMSTTSVLVSDAYRIASIAMPAAS 150
++A A A + + AVS +S + + A +AS A S
Sbjct: 443 NEVSAAKAAAASANTKAAALESAVSGGDSSTIKAAAAAVASATQTAQS 490
>UniRef50_A4SZX6 Cluster: TPR repeat-containing protein; n=1;
Polynucleobacter sp. QLW-P1DMWA-1|Rep: TPR
repeat-containing protein - Polynucleobacter sp.
QLW-P1DMWA-1
Length = 761
Score = 35.1 bits (77), Expect = 0.85
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 223 TAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG---NEAVDQLVKFNQALADYSSSS 393
T G + E + L K I + F+ L+ N D + F+ A+ SSS
Sbjct: 116 TLGALASYEEALNVLDKAILIQPNYAEAFLNHGLILAALNRLEDANISFDSAIRLNPSSS 175
Query: 394 SPHVIDGIVLTKFDTIDDKVGAAISMTYI 480
GIVLTK + +D+ + A IS ++
Sbjct: 176 ESCFNKGIVLTKLNKLDEALNAYISAIHL 204
>UniRef50_A3DCP5 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=2; Clostridium|Rep: GTP-binding
signal recognition particle SRP54, G-domain -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 403
Score = 34.7 bits (76), Expect = 1.1
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 154 AAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGN 333
+A +AI+ SD D++LIDTAGR N+ L L+ V D + V G
Sbjct: 273 SANEIQDAIKEYSDK--DLILIDTAGRSYKNKEHFDELKTLVEVTNADEIYLVLSTTTGM 330
Query: 334 EAVDQLVKFNQALADY 381
++++ L +Y
Sbjct: 331 RNCREIIEHYSFLENY 346
>UniRef50_Q92JD3 Cluster: Uncharacterized protein RC0134; n=3;
spotted fever group|Rep: Uncharacterized protein RC0134
- Rickettsia conorii
Length = 165
Score = 34.7 bits (76), Expect = 1.1
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -1
Query: 348 LVDGLVPYESLAHEEHRVGFVDRDELGEGPHQR--LVVLH 235
L G+V YE++ E+H+VGF D++++G Q+ V+LH
Sbjct: 29 LQQGIVDYEAVRVEQHKVGFSDQEKIGTDNIQQCVAVILH 68
>UniRef50_Q7PQY3 Cluster: Peptidyl-prolyl cis-trans isomerase; n=3;
Endopterygota|Rep: Peptidyl-prolyl cis-trans isomerase -
Anopheles gambiae str. PEST
Length = 860
Score = 34.3 bits (75), Expect = 1.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 32 RNSARGSSCARTRDTSTRCTRPRATTHDTWSRSTRRDTAKTRPA*QWKQY 181
R S R S +R+R T C RP T +W+ S R A+++P W+ +
Sbjct: 645 RRSRRDRSESRSRSRRT-CVRPNRPTERSWTSSATRVRARSQPRSWWRPW 693
>UniRef50_Q8YLE7 Cluster: Heterocyst glycolipid synthase; n=10;
Nostocaceae|Rep: Heterocyst glycolipid synthase -
Anabaena sp. (strain PCC 7120)
Length = 1541
Score = 33.9 bits (74), Expect = 2.0
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 208 VVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSS 387
V L TA ++Q +EP++ A A +++ EP+ V+ EA V V+Q+V+F A A ++
Sbjct: 1246 VTLAPTAWQIQ-SEPVVAATASVVSTIEPEPVI---EAPVAAPVVNQVVEFTSAPAPVAA 1301
Query: 388 SSSPHVIDGIVLTK--FDTIDDKVGAAISM 471
+ ID L K I DK G + M
Sbjct: 1302 PA----IDVADLDKNLLAIISDKTGYPVEM 1327
>UniRef50_Q67K29 Cluster: Flagellar GTP-binding protein; n=1;
Symbiobacterium thermophilum|Rep: Flagellar GTP-binding
protein - Symbiobacterium thermophilum
Length = 478
Score = 33.9 bits (74), Expect = 2.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 187 ASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFV 312
A + D+VL+DT GR +E M L +L+A +PD V V
Sbjct: 359 AHNADADLVLMDTGGRSHKDEERMAELQELLAEAQPDEVHLV 400
>UniRef50_O83587 Cluster: Cell division protein; n=1; Treponema
pallidum|Rep: Cell division protein - Treponema pallidum
Length = 295
Score = 33.9 bits (74), Expect = 2.0
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Frame = +1
Query: 145 GKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDT------VL 306
GKD A + +A K ++L+DTAGR+ + L+ L K+ + + +
Sbjct: 155 GKDPAAVVFDAGEALRAQKRGLLLVDTAGRLHNKTHLIAELQKIDRIAQTKVSADAYRKI 214
Query: 307 FVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDT 438
V +A G A Q F++A+ +D ++L K DT
Sbjct: 215 LVLDATTGQNAFRQAQTFHEAIG----------VDALLLAKCDT 248
>UniRef50_Q3V8C0 Cluster: Flagellar biosynthetic protein FlhF,
putative; n=12; Bacillus cereus group|Rep: Flagellar
biosynthetic protein FlhF, putative - Bacillus anthracis
Length = 281
Score = 33.9 bits (74), Expect = 2.0
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTV-LFVGEAL 324
+D A + + + + D +LIDTAG+ + + + + EPD + L + ++
Sbjct: 148 RDEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSASM 207
Query: 325 VGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFD 435
+ ++ + F H IDGIV TKFD
Sbjct: 208 KSKDMIEIITNFKDI----------H-IDGIVFTKFD 233
>UniRef50_Q1MZ86 Cluster: Cytochrome c4; n=1; Oceanobacter sp.
RED65|Rep: Cytochrome c4 - Oceanobacter sp. RED65
Length = 200
Score = 33.9 bits (74), Expect = 2.0
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 139 GYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTV 303
G G DAAG ++A K+ +V+ R DN +MR +AK ++ E D V
Sbjct: 137 GSGMDAAGFPALGGQHADYIKSQLVMFQEDKRANDNAQVMRDIAKRMSNKEIDAV 191
>UniRef50_Q1EWK0 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Clostridium oremlandii OhILAs|Rep:
GTP-binding signal recognition particle SRP54, G-domain
- Clostridium oremlandii OhILAs
Length = 409
Score = 33.9 bits (74), Expect = 2.0
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 205 DVVLIDTAGRMQDNEPLMRALAKLI-AVNEPDTVLFVGEALVGNEAVDQLVKFN 363
DV+LIDTAGR N + L+KL+ ++E + L V ++ D L +N
Sbjct: 295 DVILIDTAGRSHKNNEHVEELSKLLKEIHEKEVCLVVSATTKNSDLRDILHTYN 348
>UniRef50_Q9FMK9 Cluster: Emb|CAB76911.1; n=5; Arabidopsis
thaliana|Rep: Emb|CAB76911.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 389
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 265 LAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHV 405
++++IA +PD ++F G+ + G + D L N A A +S P V
Sbjct: 85 MSRVIAAEKPDLIVFTGDNIFGFDVKDALKSINAAFAPAIASKIPWV 131
>UniRef50_P75362 Cluster: Cell division protein ftsY homolog; n=4;
Mycoplasma|Rep: Cell division protein ftsY homolog -
Mycoplasma pneumoniae
Length = 348
Score = 33.9 bits (74), Expect = 2.0
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Frame = +1
Query: 148 KDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL------IAVNEPDTVLF 309
++ + ++ + D VL DT+GR+Q+ LM L K+ ++ +P L
Sbjct: 201 EETPAVIFRGVQQGIQNEYDFVLCDTSGRLQNKTNLMNELKKIYQIVQKVSSAKPQETLL 260
Query: 310 VGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDT 438
V + G + Q FN+ + GI+LTK D+
Sbjct: 261 VLDGTTGQSGLAQAKVFNEFTE----------LTGIILTKMDS 293
>UniRef50_Q1VMG0 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Psychroflexus torquis ATCC
700755|Rep: Signal recognition particle-docking protein
FtsY - Psychroflexus torquis ATCC 700755
Length = 238
Score = 33.5 bits (73), Expect = 2.6
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +1
Query: 121 VTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL---IAVNE 291
V L Y D + + +A A D ++ DTAGR+ LM L K+ +A +
Sbjct: 138 VPLVSTQYQGDPSAVCFDAHEKAIAIGADYLICDTAGRLHTRHNLMEELKKISRTLAKQD 197
Query: 292 ---PDTVLFVGEALVGNEAVDQLVKFNQAL 372
P V +A G+ A+ Q +F AL
Sbjct: 198 ETAPHERWIVVDATTGSNALSQTKEFGTAL 227
>UniRef50_Q945R1 Cluster: Putative uncharacterized protein; n=1;
Medicago sativa|Rep: Putative uncharacterized protein -
Medicago sativa (Alfalfa)
Length = 360
Score = 33.5 bits (73), Expect = 2.6
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = -2
Query: 485 PVMYVIDMAAPTLSSIVSNLVSTIPSMTCGLLDEL*SARAWLNLTSWSTASFPTRASPTK 306
P + I ++ PTLSS++ +L +T S GLL + LNLT S+ + PT
Sbjct: 5 PPLQKIAISGPTLSSLLHHLSTTSTSTFSGLLFGHVTLTTPLNLTDDSSDTTPT----LL 60
Query: 305 STVSGSLTAMS 273
+TV+G LT S
Sbjct: 61 ATVTGFLTTSS 71
>UniRef50_Q4RGH1 Cluster: Chromosome 18 SCAF15100, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 18 SCAF15100, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 81
Score = 33.1 bits (72), Expect = 3.4
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +2
Query: 14 SGSPGCRNSARGSSCARTRDTSTRCTRPRATTHDTWSRST 133
S S CR A +S AR R RP AT+ TWS ST
Sbjct: 34 SSSTRCRGGAGVTSTARETSPLHRGMRPSATSTSTWSSST 73
>UniRef50_Q98IK0 Cluster: Mlr2365 protein; n=1; Mesorhizobium
loti|Rep: Mlr2365 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 812
Score = 33.1 bits (72), Expect = 3.4
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -1
Query: 453 DFIVDSIELGEHYSVDDVRTAGRAVVGEGLVELDQLVDGLV 331
D +DS+ L H+S DD R AG A+ +GL + D L G V
Sbjct: 263 DRSLDSVALDAHFSADDARLAGEAL--KGLFKRDGLEAGFV 301
>UniRef50_Q0EZU7 Cluster: Adenylate/Guanylate Cyclase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Adenylate/Guanylate
Cyclase - Mariprofundus ferrooxydans PV-1
Length = 495
Score = 33.1 bits (72), Expect = 3.4
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 118 MVTLYEKGYGKDAAGIAMEAIRYA-SDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEP 294
M L + Y AG EA+ A S + D++L+D ++ + R L K A+
Sbjct: 48 MQALLQSRYEVMLAGDGEEAMALALSSNRPDLILLDIMMPGENGYDVCRRL-KANALTAD 106
Query: 295 DTVLFVGEALVGNEAVDQLVKFNQALADY-SSSSSPHVIDGIVLTKFD 435
V+FV G+ D+LV F+ ADY S S SP ++ + + D
Sbjct: 107 IPVIFVTAKDTGD---DELVGFDAGAADYVSRSVSPAIMHARIKNQLD 151
>UniRef50_A4XIZ5 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Caldicellulosiruptor
saccharolyticus DSM 8903|Rep: GTP-binding signal
recognition particle SRP54, G-domain -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 370
Score = 33.1 bits (72), Expect = 3.4
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 202 TDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADY 381
+DVVL+DTAGR N+ M L + PD V + A ++V + +Y
Sbjct: 253 SDVVLVDTAGRSHKNQEHMDELRAFVEKASPDEVFLLLSATTQPSVFKEIVNTYSFIDNY 312
>UniRef50_A1ZLE9 Cluster: TPR repeat, putative; n=1; Microscilla
marina ATCC 23134|Rep: TPR repeat, putative -
Microscilla marina ATCC 23134
Length = 433
Score = 33.1 bits (72), Expect = 3.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 223 TAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEA----LVGNEAVDQLVKFNQALADYSSS 390
T GR+Q+ E +R K IA+N DT+ F +A L+G E + L N L Y +
Sbjct: 269 TLGRLQNREEAIRCFDKAIALNPQDTLAFSNKAHVFHLMGKE-TESLAAANAGLVIYKQN 327
>UniRef50_Q5KZ39 Cluster: Peptidase T; n=45; Bacteria|Rep: Peptidase
T - Geobacillus kaustophilus
Length = 411
Score = 33.1 bits (72), Expect = 3.4
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -1
Query: 441 DSIELGEHYSVDDVRTAGRAVVGE----GLVELDQLVDGLVPYESLAHEEHRVGFVDRDE 274
D EL + + T G ++G G+ E+ ++ L+ + + H + RV F +E
Sbjct: 118 DFPELAHYKGHTLITTDGTTLLGADDKAGIAEIMTAMNYLIQHPEIKHGKVRVAFTPDEE 177
Query: 273 LGEGPHQ 253
+G GPH+
Sbjct: 178 IGRGPHK 184
>UniRef50_Q9X009 Cluster: Flagellar biosynthesis protein FlhF; n=4;
Thermotogaceae|Rep: Flagellar biosynthesis protein FlhF
- Thermotoga maritima
Length = 378
Score = 32.7 bits (71), Expect = 4.5
Identities = 28/94 (29%), Positives = 44/94 (46%)
Frame = +1
Query: 205 DVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYS 384
D+VL+DTAGR N+ M L L +P+ V L N +D + + + +S
Sbjct: 251 DIVLVDTAGRSHQNDLQMSELRALSEAVKPNITFLV---LSMNYKLDDM---KRIVERFS 304
Query: 385 SSSSPHVIDGIVLTKFDTIDDKVGAAISMTYITG 486
+ H I+LTK D G ++++ ITG
Sbjct: 305 AVKPTH----IILTKMDE-TSVYGTFVNISEITG 333
>UniRef50_Q73L22 Cluster: Signal recognition particle-docking
protein FtsY; n=1; Treponema denticola|Rep: Signal
recognition particle-docking protein FtsY - Treponema
denticola
Length = 292
Score = 32.7 bits (71), Expect = 4.5
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Frame = +1
Query: 142 YGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKL--IAVNEPD----TV 303
+G D + +A + + +VL DTAGR+ + + L+R L K+ IA +
Sbjct: 152 HGGDPGAVIFDAGDAMASSGGGLVLADTAGRLHNKDNLVRELQKIDRIAKTKASEGCYKK 211
Query: 304 LFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAIS 468
+ V +A G + Q F++A+ +D + LTK+D+ K G A++
Sbjct: 212 ILVLDATTGQNGLRQAEVFHEAIG----------VDAVFLTKYDS-TAKGGVAVT 255
>UniRef50_A5GBS8 Cluster: Polymorphic outer membrane protein
precursor; n=1; Geobacter uraniumreducens Rf4|Rep:
Polymorphic outer membrane protein precursor - Geobacter
uraniumreducens Rf4
Length = 2042
Score = 32.7 bits (71), Expect = 4.5
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Frame = -2
Query: 482 VMYVIDMAAPTLSSI-VSNLVSTIPSMTCGLLDEL*SARAWLNLTSWSTASFPTRASPTK 306
V ++D APTLSSI SN + ++T + + +W+ ++S +TA PT A
Sbjct: 1020 VNVLVDTTAPTLSSIATSNPTHSGGTLTATANEN--ALGSWIAVSSSATA--PTVAQVLA 1075
Query: 305 STVSGSLTAMSLARARIRGSLSCIRPAVSMSTTSVLVSDAYRIASIAMPAASLP 144
G +T + A G+LS AVS S + ++ + +Y I A AA P
Sbjct: 1076 GADYGGVTVV----AHGSGALSA-GSAVSFSLSGLVAATSYDIYLAAQDAAGNP 1124
>UniRef50_A0UJZ2 Cluster: Putative uncharacterized protein
precursor; n=4; Burkholderia|Rep: Putative
uncharacterized protein precursor - Burkholderia
multivorans ATCC 17616
Length = 834
Score = 32.7 bits (71), Expect = 4.5
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -1
Query: 315 AHEEHRVGFVDRDELGEGPHQRLVVLHSARSVDEHDVG 202
AHE HR G R+ G HQRL V +AR V+EH++G
Sbjct: 363 AHE-HRSGGNRRERRRAGRHQRLRV--AARQVEEHEIG 397
>UniRef50_Q5CVM4 Cluster: Secreted protein with cysteine rich repeats
and a mucin like threonine rich repeat, signal peptide;
n=3; Cryptosporidium|Rep: Secreted protein with cysteine
rich repeats and a mucin like threonine rich repeat,
signal peptide - Cryptosporidium parvum Iowa II
Length = 1124
Score = 32.7 bits (71), Expect = 4.5
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +2
Query: 50 SSCARTRDTSTRCTRPRATTHDTWSRSTRRDTAKTRPA*QWKQYDTRLTLKPTSCSSTLR 229
S+ TR T+T TRP TT + + +TR T TRP T T +PT+ ++T
Sbjct: 937 STTTTTRPTTTT-TRPTTTTTRSTTTTTRPTTTTTRPT-TTTTRPTTTTTRPTTTTTTTT 994
Query: 230 AECR 241
R
Sbjct: 995 TTTR 998
>UniRef50_Q54YZ6 Cluster: RhoGEF domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: RhoGEF
domain-containing protein - Dictyostelium discoideum AX4
Length = 1218
Score = 32.7 bits (71), Expect = 4.5
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -2
Query: 485 PVMYVIDMAAPTLSSIVSNLVSTIPSMTCGLLDEL*SARAWLNLTSWSTASFPTRASPTK 306
PV+ D A+PT S++VS T PS T ++ + +N TS ST++ +PT
Sbjct: 650 PVVKSSDTASPTKSTVVSTATVT-PSTTTTTTTTTTTSTSSVNATSTSTSTSTPTPTPTP 708
Query: 305 ST 300
+T
Sbjct: 709 TT 710
>UniRef50_Q4QGJ2 Cluster: Surface antigen protein 2, putative; n=10;
Trypanosomatidae|Rep: Surface antigen protein 2,
putative - Leishmania major
Length = 648
Score = 32.7 bits (71), Expect = 4.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 44 RGSSCARTRDTSTRCTRPRATTHDTWSRSTRR----DTAKTRPA*QWKQYDTRLTLKPTS 211
+GS C +D +T T+P TT T + +T + T T+P T T KP +
Sbjct: 432 KGSDCLAAKDCTTTTTKPPTTTTTTTTTTTTKPPTTTTTTTKPPTTTTTTTTTTTTKPPT 491
Query: 212 CSST 223
++T
Sbjct: 492 TTTT 495
>UniRef50_Q4P121 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1185
Score = 32.7 bits (71), Expect = 4.5
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -2
Query: 353 TSWSTASFPTR-ASPTKSTVSGSLTAMSLARARIRGSLSCIRPAVSMSTTSVLVSDAYRI 177
TS +TA+ R +SP+ S + +++A S R I L IRP + ++ +D+YR+
Sbjct: 704 TSDATAANTNRVSSPSSSAATAAVSAAS-KRTAIDSELRSIRPMIQQIDAAIAQADSYRL 762
Query: 176 ASI 168
++
Sbjct: 763 VAL 765
>UniRef50_A6S7R9 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 412
Score = 32.3 bits (70), Expect = 6.0
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -2
Query: 467 DMAAPTLSSIVSNLVSTIPSMTCGLLDEL*SARAWLNLTSWSTASFPTRASPTKSTVSGS 288
D A+ L S+ SN +++ T G ++ + NL+S S T +S + ST+SGS
Sbjct: 77 DCASERLPSVSSNSSNSVT--TVGTASHTGASISHNNLSSKSRTRMTTVSSASISTLSGS 134
Query: 287 LTAMSLARARIRGSLSCI-RPAVSMSTTS 204
+ +ARA R L RPA S ++ +
Sbjct: 135 TQSGRVARASFRMMLGVTDRPAGSENSNT 163
>UniRef50_Q7W0U4 Cluster: Putative uncharacterized protein; n=3;
Bordetella|Rep: Putative uncharacterized protein -
Bordetella parapertussis
Length = 308
Score = 31.9 bits (69), Expect = 7.9
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 183 SYCFHCYAGRVFAVSLLVERDHVSCVVARGRVQRVEVSRVRAQLLPR-AEFLQ 28
+YCF GR + +S R+H V+A G V RV + + + LP E+LQ
Sbjct: 220 AYCFELRRGRFWVMSEAAMREHCP-VLADGPVHRVAAACIEVRSLPALQEYLQ 271
>UniRef50_Q1RN79 Cluster: FlhF; n=1; Azospirillum brasilense|Rep:
FlhF - Azospirillum brasilense
Length = 353
Score = 31.9 bits (69), Expect = 7.9
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 205 DVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVD 345
DVVL+DTAGR N M L L++ + +L + L EA D
Sbjct: 213 DVVLVDTAGRNPYNREDMADLKALLSAGVAEPILVLPAGLDAMEAAD 259
>UniRef50_A7HUE0 Cluster: O-antigen polymerase; n=1; Parvibaculum
lavamentivorans DS-1|Rep: O-antigen polymerase -
Parvibaculum lavamentivorans DS-1
Length = 472
Score = 31.9 bits (69), Expect = 7.9
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = -2
Query: 305 STVSGSLTAMSLARARIRGSLSCIR----PAVSMSTTSVLVSDAYRIASIAMPAASLPYP 138
+ ++ +L+ + LA +RG R PA+ ++ T ++ A+ S+ MPA S+ Y
Sbjct: 393 AAIALNLSILLLAAEALRGLWRRRRDRTGPAIGVAATVLVGLHAFFDFSLQMPAVSVLYA 452
Query: 137 FS*SVTMCRAWWRAGGCS 84
F M ++W +AG S
Sbjct: 453 FIMGFAMSQSWPKAGSRS 470
>UniRef50_A1ZYD1 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 830
Score = 31.9 bits (69), Expect = 7.9
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1
Query: 450 FIVDSIELGEH--YSVDDVRTAGRAVVGEGLVELDQLVDGLVPYESLAHEEHRVGFVDR 280
F++DS++LG+H Y +D + + R + EG + +D+ L + ++ + F+++
Sbjct: 256 FLMDSVQLGKHFCYKIDVIPKSKRDLAFEGTIWIDKATYALKQIDVRVDKKANINFLEK 314
>UniRef50_A0T917 Cluster: Haemagluttinin motif; n=3; Burkholderia
cepacia complex|Rep: Haemagluttinin motif - Burkholderia
ambifaria MC40-6
Length = 2930
Score = 31.9 bits (69), Expect = 7.9
Identities = 25/107 (23%), Positives = 54/107 (50%)
Frame = -2
Query: 470 IDMAAPTLSSIVSNLVSTIPSMTCGLLDEL*SARAWLNLTSWSTASFPTRASPTKSTVSG 291
I+ + + S+ +S+L + + S++ L + + ++ S +S T AS STV+
Sbjct: 1861 IETLSTSTSTGISSLSTGMSSLSTSTSTGLSTVTSGIDSLSTGISSLSTSASTGLSTVTS 1920
Query: 290 SLTAMSLARARIRGSLSCIRPAVSMSTTSVLVSDAYRIASIAMPAAS 150
+ ++S + + SLS V+ S S+ S + I+S++ A++
Sbjct: 1921 GINSLSTSTSTAVSSLSTGISGVTSSIGSLSTSASTGISSLSTSAST 1967
>UniRef50_Q4H3V6 Cluster: ATRX protein; n=1; Ciona intestinalis|Rep:
ATRX protein - Ciona intestinalis (Transparent sea
squirt)
Length = 1086
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -1
Query: 144 VSLLVERDHVSCVVARGRVQRVEVSRVRAQLLPRAEFL 31
V L+ +R HV + G VQR +V+ +R QL+P+ E++
Sbjct: 455 VKLMKKRSHVLHELLAGCVQRKDVNCLREQLMPKHEYV 492
>UniRef50_A2DCA9 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 536
Score = 31.9 bits (69), Expect = 7.9
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 262 ALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDG---IVLTKF 432
A AKLIA T +FV + ++ + +D +K+ + +VI IV TKF
Sbjct: 197 AKAKLIA----STSVFVHDMMIFYDGLDPRLKYGSNSITVGQNEQAYVIKAGTVIVFTKF 252
Query: 433 DTIDDKVGAA 462
D I+ VGA+
Sbjct: 253 DGIEGNVGAS 262
>UniRef50_Q5KDM4 Cluster: Specific transcriptional repressor,
putative; n=2; Filobasidiella neoformans|Rep: Specific
transcriptional repressor, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 442
Score = 31.9 bits (69), Expect = 7.9
Identities = 26/76 (34%), Positives = 36/76 (47%)
Frame = -2
Query: 344 STASFPTRASPTKSTVSGSLTAMSLARARIRGSLSCIRPAVSMSTTSVLVSDAYRIASIA 165
ST SF S +KS+ + +S AR S RP+ +S V D + S +
Sbjct: 33 STRSFGREESMSKSSDNHKSVLLSPI-ARSSSSSPVPRPSHKLSEVVEAVEDKGKKTSQS 91
Query: 164 MPAASLPYPFS*SVTM 117
+PAASLP F S T+
Sbjct: 92 LPAASLPLIFRSSPTL 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,046,235
Number of Sequences: 1657284
Number of extensions: 7587646
Number of successful extensions: 33231
Number of sequences better than 10.0: 225
Number of HSP's better than 10.0 without gapping: 31820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33157
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -