Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0528
(486 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047663-8|AAK84581.1| 114|Caenorhabditis elegans Hypothetical ... 144 4e-35
Z68161-12|CAA92301.1| 496|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z54271-9|CAA91040.1| 496|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z47358-1|CAA87437.1| 279|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 30 0.77
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z69360-5|CAE45744.1| 454|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 27 7.2
U42436-8|AAF99897.3| 950|Caenorhabditis elegans Importin beta f... 27 7.2
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL132949-18|CAB70109.2| 725|Caenorhabditis elegans Hypothetical... 27 7.2
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 27 9.5
>AF047663-8|AAK84581.1| 114|Caenorhabditis elegans Hypothetical
protein W09G12.5 protein.
Length = 114
Score = 144 bits (348), Expect = 4e-35
Identities = 71/85 (83%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Frame = +1
Query: 235 MQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSS-SSSPHVID 411
MQDNEPLMR LAKLI VNEPD VLFVGEALVGNEAVDQLVKFN+ALA+++S P +ID
Sbjct: 1 MQDNEPLMRELAKLIRVNEPDLVLFVGEALVGNEAVDQLVKFNEALANHASPGQKPRLID 60
Query: 412 GIVLTKFDTIDDKVGAAISMTYITG 486
GIVLTKFDTIDDKVGAA+SMTYITG
Sbjct: 61 GIVLTKFDTIDDKVGAAVSMTYITG 85
>Z68161-12|CAA92301.1| 496|Caenorhabditis elegans Hypothetical
protein F21D5.7 protein.
Length = 496
Score = 41.5 bits (93), Expect = 3e-04
Identities = 29/111 (26%), Positives = 53/111 (47%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D IA E + + +++++DT+GR + L + ++ PD V+FV +A +G
Sbjct: 167 DPVKIAAEGVEKFTQEGFEIIIVDTSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIG 226
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
Q F+Q + D +S +++TK D+ K G A+S +T
Sbjct: 227 QACEAQARAFSQTV-DVAS---------VIITKLDS-HAKGGGALSAVAVT 266
>Z54271-9|CAA91040.1| 496|Caenorhabditis elegans Hypothetical
protein F21D5.7 protein.
Length = 496
Score = 41.5 bits (93), Expect = 3e-04
Identities = 29/111 (26%), Positives = 53/111 (47%)
Frame = +1
Query: 151 DAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVG 330
D IA E + + +++++DT+GR + L + ++ PD V+FV +A +G
Sbjct: 167 DPVKIAAEGVEKFTQEGFEIIIVDTSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIG 226
Query: 331 NEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTIDDKVGAAISMTYIT 483
Q F+Q + D +S +++TK D+ K G A+S +T
Sbjct: 227 QACEAQARAFSQTV-DVAS---------VIITKLDS-HAKGGGALSAVAVT 266
>Z47358-1|CAA87437.1| 279|Caenorhabditis elegans Hypothetical
protein ZK1307.1a protein.
Length = 279
Score = 30.7 bits (66), Expect = 0.59
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +1
Query: 184 YASDTKTDVVLIDTAGRMQDNEPLMRALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFN 363
+A +T + A N+ ++R L IAV+E + FV A+ + V + +
Sbjct: 183 FAPVDETSALYYPPAFSEATNKEILRRLPNSIAVSEAEANAFVCNAITIRDTVISPIGVS 242
Query: 364 QALADYSSSSSPHV 405
QA DY S+ V
Sbjct: 243 QATKDYLSARGKRV 256
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 30.3 bits (65), Expect = 0.77
Identities = 27/107 (25%), Positives = 45/107 (42%)
Frame = -2
Query: 458 APTLSSIVSNLVSTIPSMTCGLLDEL*SARAWLNLTSWSTASFPTRASPTKSTVSGSLTA 279
+PT +SI ++ VST P +E + PT +SP+ ST + + T+
Sbjct: 62 SPTTTSISTSTVSTTPERLTKPYEE-------------TDTPIPTHSSPSTSTSTSTSTS 108
Query: 278 MSLARARIRGSLSCIRPAVSMSTTSVLVSDAYRIASIAMPAASLPYP 138
S + +R S S + P STT+ S + +A + P
Sbjct: 109 TSTSTSR---STSTVTPTTRSSTTTTATSTPTSSSKATTTSAQITQP 152
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -2
Query: 344 STASFPTRASPTKSTVSGSLTAMSLARARIRGSLSCIRPAVSM----STTSVLVSDAYRI 177
S ++ PT +S S S S + +++ S++CI P++++ S TS + +Y +
Sbjct: 675 SGSTLPTNSSSGSSDSSTSPSTFTVSYNNTNSSITCIEPSLNLTYTSSPTSSQIKSSYSV 734
Query: 176 ASIAMPAASLPYPF 135
+ Y F
Sbjct: 735 GELITQVCPQSYVF 748
>Z69360-5|CAE45744.1| 454|Caenorhabditis elegans Hypothetical
protein F25H8.5d protein.
Length = 454
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -1
Query: 459 GADFIVDSIELGEHYSVDDVRTAGRAVVGEGLVELDQLV-DGL-VPYESLAH 310
GA + D + +Y+VD TAG A+V +G + Q DG+ + E++AH
Sbjct: 165 GAGKVADGAKAAGNYAVDSANTAGEAIV-DGAKTVGQTASDGMRMIGENVAH 215
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -1
Query: 459 GADFIVDSIELGEHYSVDDVRTAGRAVVGEGLVELDQLV-DGL-VPYESLAH 310
GA + D + +Y+VD TAG A+V +G + Q DG+ + E++AH
Sbjct: 491 GAGKVADGAKAAGNYAVDSANTAGEAIV-DGAKTVGQTASDGMRMIGENVAH 541
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -1
Query: 459 GADFIVDSIELGEHYSVDDVRTAGRAVVGEGLVELDQLV-DGL-VPYESLAH 310
GA + D + +Y+VD TAG A+V +G + Q DG+ + E++AH
Sbjct: 491 GAGKVADGAKAAGNYAVDSANTAGEAIV-DGAKTVGQTASDGMRMIGENVAH 541
>Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical
protein ZC412.2 protein.
Length = 1170
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -1
Query: 450 FIVDSIELGEHYSVDDVRTAGRAVVG 373
F VD I GEHYS DD T G V G
Sbjct: 263 FYVDEINGGEHYSWDD--TDGNFVTG 286
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 38 SARGSSCARTRDTSTRCTRPRATTHDTWSRSTRRDTAKTR 157
S RGS +R +T R +RPR + S +T + T T+
Sbjct: 559 SPRGSMRSRIINTCKRSSRPRTVSAVVTSPTTEKPTCSTK 598
>U42436-8|AAF99897.3| 950|Caenorhabditis elegans Importin beta family
protein 6 protein.
Length = 950
Score = 27.1 bits (57), Expect = 7.2
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = -2
Query: 482 VMYVIDMAAPTLSSIVSNLVSTIPSMTCGLLDEL*SARAWLNLTSWSTASFPTRASPTK- 306
++YV L +++++ + + T GLLD + + A L L+S TA + K
Sbjct: 793 LLYVQRAFVQLLYTVIASDCTPALNTTPGLLDHVLESAARLALSSDQTAQKVALSCLAKI 852
Query: 305 STVSGSLTAMSLARARIRGSLSCIRPAVSMSTTSV 201
S ++ S +A +L A SLS I P+ + ST V
Sbjct: 853 SLITPSWSARTLRVALEIPSLSHITPSDAGSTLVV 887
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 32 RNSARGSSCARTRDTSTRCTRPRATTHDT 118
RN RG++ A TR R T P + TH T
Sbjct: 203 RNRERGNAPAFTRPGRVRTTTPMSVTHAT 231
>AL132949-18|CAB70109.2| 725|Caenorhabditis elegans Hypothetical
protein Y53F4B.20 protein.
Length = 725
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +1
Query: 274 LIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDTI 441
L V++PD LF G ++ E Q+ + ++D +S+ + D I+L F+ +
Sbjct: 49 LSEVSDPDVPLFTGRCVMHFEINQQIGPESAFISDSTSNRARIKFDIIMLDHFENV 104
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 26.6 bits (56), Expect = 9.5
Identities = 25/100 (25%), Positives = 36/100 (36%)
Frame = -2
Query: 329 PTRASPTKSTVSGSLTAMSLARARIRGSLSCIRPAVSMSTTSVLVSDAYRIASIAMPAAS 150
PT + TV + ++L A IR PA +STT+ ++
Sbjct: 476 PTEIPDNRPTVVTTRPLVTLPPAVIRSR----SPAPPVSTTTKAAPTTSTTSAAPYSPTP 531
Query: 149 LPYPFS*SVTMCRAWWRAGGCSALRCRVCVRSCSLVPNSC 30
LP S C W AG C + ++C P SC
Sbjct: 532 LPSECSDRKHFCSHWKSAGFCEGIFMNYMKKNC---PASC 568
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,053,697
Number of Sequences: 27780
Number of extensions: 164947
Number of successful extensions: 675
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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