Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0524
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   6.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 456 WPSCSPDQNIVAEIDSNWCRLTVYPLPPG 370
           +P  SP+ + VA   ++W   ++YPL PG
Sbjct: 174 YPILSPEMSQVA---ASWHTPSMYPLSPG 199


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 456 WPSCSPDQNIVAEIDSNWCRLTVYPLPPG 370
           +P  SP+ + VA   ++W   ++YPL PG
Sbjct: 66  YPILSPEMSQVA---ASWHTPSMYPLSPG 91


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 304 NNTTFFLGKGELVLTFSCQINFTRVNKRLIFNKKKSVFLN 185
           +N   FL K  +   F C  +FT+     +FN +++VF N
Sbjct: 429 DNPARFLQKA-MDFPFICN-SFTKFEFNTVFNDQRTVFAN 466


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 235 RVNKRLIFNKKKSVFLNNKIGLEKVK 158
           R  ++L  N+K+ VF+N  + +E V+
Sbjct: 546 RDGRQLPINRKQKVFINGTLIIENVE 571


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 408 WNLFLLQYSDLESKRAIYYSLTLPQY 485
           W  F L+Y  +     I+++LTL  Y
Sbjct: 154 WTRFQLKYYQVTGTPIIFHNLTLITY 179


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 408 WNLFLLQYSDLESKRAIYYSLTLPQY 485
           W  F L+Y  +     I+++LTL  Y
Sbjct: 154 WTRFQLKYYQVTGTPIIFHNLTLITY 179


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 279 LPKKNVVLFRCAILGVFIM 335
           L K+N  +FR ++L +F+M
Sbjct: 121 LEKRNRHIFRTSVLLIFVM 139


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 279 LPKKNVVLFRCAILGVFIM 335
           L K+N  +FR ++L +F+M
Sbjct: 121 LEKRNRHIFRTSVLLIFVM 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,454
Number of Sequences: 336
Number of extensions: 3439
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)