Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0523
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/31 (25%), Positives = 20/31 (64%)
 Frame = -1

Query: 393 ELLIFLIRAAGNASLCLFLVFTLCKSQTLGN 301
           +LLIF++  +GN+++ + L+ +    ++  N
Sbjct: 80  KLLIFVVSLSGNSAVFIMLIISFMHKKSFKN 110


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 236  ILTLASQYIFENLLYVRKNIVEFPRVCDLHN 328
            I+T  S  + +    VRK  ++F ++C LH+
Sbjct: 1279 IVTYFSTNLPKRETEVRKKSLDFGKLCSLHH 1309


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/36 (19%), Positives = 20/36 (55%)
 Frame = +2

Query: 425 KIPQNVQLLPVHRFKKTVKERLCNKAYYKVKDFLLD 532
           ++ + ++  P H++KK    +   + YY+  D +++
Sbjct: 216 EVKEEIEDEPDHKWKKNDSSKKKTRYYYRSVDDVIE 251


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 80  FSYFHSVMSYGILLW 124
           ++ +  V S+G+LLW
Sbjct: 671 YTTYSDVWSFGVLLW 685


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,904
Number of Sequences: 336
Number of extensions: 3439
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)