Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0523
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    31   1.1  
BT001471-1|AAN71226.1| 1048|Drosophila melanogaster LD03769p pro...    30   3.4  
AF247500-1|AAF63388.1| 1048|Drosophila melanogaster kinesin-like...    30   3.4  
AE014134-1877|AAF52943.2| 1048|Drosophila melanogaster CG5300-PA...    30   3.4  
X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    29   7.9  
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    29   7.9  

>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p
           protein.
          Length = 906

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 68  RLVYFSYFHSVMSYGILLWGNAA--DVETIFILQKRAIRAI 184
           R VY      +  YGI +WG AA  +   I +LQ RA+RAI
Sbjct: 798 RAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAI 838


>BT001471-1|AAN71226.1| 1048|Drosophila melanogaster LD03769p
           protein.
          Length = 1048

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 167 RAIRAIYNMHTRESLRDKFKEIKILTLASQYIFENLLYVRKNIVEF 304
           R +  + N  T +   D+F E+  L     YI EN+ +V++ I+EF
Sbjct: 821 RELNIMENGQTADRQTDEFNEVDNLKTNISYIQENIEHVQQAIMEF 866


>AF247500-1|AAF63388.1| 1048|Drosophila melanogaster kinesin-like
           protein protein.
          Length = 1048

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 167 RAIRAIYNMHTRESLRDKFKEIKILTLASQYIFENLLYVRKNIVEF 304
           R +  + N  T +   D+F E+  L     YI EN+ +V++ I+EF
Sbjct: 821 RELNIMENGQTADRQTDEFNEVDNLKTNISYIQENIEHVQQAIMEF 866


>AE014134-1877|AAF52943.2| 1048|Drosophila melanogaster CG5300-PA
           protein.
          Length = 1048

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 167 RAIRAIYNMHTRESLRDKFKEIKILTLASQYIFENLLYVRKNIVEF 304
           R +  + N  T +   D+F E+  L     YI EN+ +V++ I+EF
Sbjct: 821 RELNIMENGQTADRQTDEFNEVDNLKTNISYIQENIEHVQQAIMEF 866


>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 71  LVYFSYFHSVMSYGILLWGNA--ADVETIFILQKRAIRAI 184
           L+Y S    + +YG  LWGNA  ++++ I   Q R +R I
Sbjct: 784 LLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRII 823


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 71  LVYFSYFHSVMSYGILLWGNA--ADVETIFILQKRAIRAI 184
           L+Y S    + +YG  LWGNA  ++++ I   Q R +R I
Sbjct: 784 LLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRII 823


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,536,275
Number of Sequences: 53049
Number of extensions: 575828
Number of successful extensions: 1443
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)