Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0521
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    27   0.14 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    27   0.19 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   3.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.1  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    23   3.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.2  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 398 VGATCLLLPYSSIIYHFFAHSPPTHIV 318
           + A+ +LLP++  IYH F H  PT ++
Sbjct: 47  ITASAVLLPFA--IYHIFMHIVPTKLI 71


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 423 DNDDDVWSWNNAPSGKHTVLSTQRVLPMLPR 515
           D+DD     + +PS  HTVL  Q + P +PR
Sbjct: 45  DDDDTDGRESLSPSSAHTVLIPQPLHPSVPR 75


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 129 SVFYPFSLLHTSIATFASLLHAIAFQL 49
           ++ +P++ ++T  A  AS+ HA A  L
Sbjct: 132 AIAWPYAAVYTDPAFAASIFHAAATSL 158


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 420 QDNDDDVWSWNNAPSGKHTV 479
           ++NDD+ + W ++  G  TV
Sbjct: 146 KNNDDEQYVWESSAGGSFTV 165


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 128 PYSIHSRYSTHPSQHSHL 75
           PY    ++  HPSQ +HL
Sbjct: 293 PYGHPYQFDLHPSQFAHL 310


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 128 PYSIHSRYSTHPSQHSHL 75
           PY    ++  HPSQ +HL
Sbjct: 293 PYGHPYQFDLHPSQFAHL 310


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 128 PYSIHSRYSTHPSQHSHL 75
           PY    ++  HPSQ +HL
Sbjct: 293 PYGHPYQFDLHPSQFAHL 310


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 128 PYSIHSRYSTHPSQHSHL 75
           PY    ++  HPSQ +HL
Sbjct: 249 PYGHPYQFDLHPSQFAHL 266


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 128 PYSIHSRYSTHPSQHSHL 75
           PY    ++  HPSQ +HL
Sbjct: 293 PYGHPYQFDLHPSQFAHL 310


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 128 PYSIHSRYSTHPSQHSHL 75
           PY    ++  HPSQ +HL
Sbjct: 81  PYGHPYQFDLHPSQFAHL 98


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 128 PYSIHSRYSTHPSQHSHL 75
           PY    ++  HPSQ +HL
Sbjct: 293 PYGHPYQFDLHPSQFAHL 310


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 373 GRSKHVAPTPGDCGK 417
           G+ KH  PTP D  K
Sbjct: 312 GKLKHGGPTPSDATK 326


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 128  PYSIHSRYSTHPSQHSHLCCMQSPFNSF 45
            P S+HS     P QHS    +  P + F
Sbjct: 1796 PPSVHSSTVVPPPQHSTTQSLVDPKSEF 1823


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 386 CLLLPYSSIIYHFFAHSPPTH 324
           C + P  +  YHF  H+  TH
Sbjct: 155 CPIHPGMTFRYHFNVHNSGTH 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,753
Number of Sequences: 336
Number of extensions: 4258
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)