Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0520
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.3  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FILQCITDLD 151
           F+LQC+ DLD
Sbjct: 68  FLLQCLEDLD 77


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 326 NLLKFYVHGKKTINTKNNWPIPYL 397
           N++   +  K+TI   +N  +PY+
Sbjct: 887 NIMDLLMDSKRTIEINDNISMPYI 910


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 326 NLLKFYVHGKKTINTKNNWPIPYL 397
           N++   +  K+TI   +N  +PY+
Sbjct: 887 NIMDLLMDSKRTIEINDNISMPYI 910


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 326 NLLKFYVHGKKTINTKNNWPIPYL 397
           N++   +  K+TI   +N  +PY+
Sbjct: 887 NIMDLLMDSKRTIEINDNISMPYI 910


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 326 NLLKFYVHGKKTINTKNNWPIPYL 397
           N++   +  K+TI   +N  +PY+
Sbjct: 887 NIMDLLMDSKRTIEINDNISMPYI 910


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 601  RRFVNHVGKKIETN 642
            RRF+ HV   IETN
Sbjct: 1922 RRFIAHVVDFIETN 1935


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,737
Number of Sequences: 336
Number of extensions: 3158
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)