Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0520
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069290-1|AAL39435.1|  299|Drosophila melanogaster GM14467p pro...    76   5e-14
AE014296-286|AAF47512.1|  299|Drosophila melanogaster CG7864-PA ...    76   5e-14

>AY069290-1|AAL39435.1|  299|Drosophila melanogaster GM14467p
           protein.
          Length = 299

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 39/120 (32%), Positives = 71/120 (59%), Gaps = 7/120 (5%)
 Frame = +1

Query: 322 AQPAEVLRAWQKDDQYEKQLADSISKLLPL-------QHGSKAIPISSLLYKSFTTLKDL 480
           A+  E++R+ QKD +Y  +LA+ +S +L L       ++      ++ L Y  F +  +L
Sbjct: 8   ARQPEIVRSVQKDARYTNELAEDLSDVLRLTGPRNWIKYNQMCRLLAELSYHGFASANNL 67

Query: 481 QTLGEEYSGIVQVDDSYHKLPSYYARLASVLLSTFGENLTRRFVNHVGKKIETNRSLRSE 660
           QTLGEEY+GI+QVD +Y ++PS   +L +++L   G++L +R +  +   +  N  +R+E
Sbjct: 68  QTLGEEYTGIIQVDGNYKQIPSRLLQLIAIVLEFGGDSLFQRLMQKLDTYVANNDEIRTE 127


>AE014296-286|AAF47512.1|  299|Drosophila melanogaster CG7864-PA
           protein.
          Length = 299

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 39/120 (32%), Positives = 71/120 (59%), Gaps = 7/120 (5%)
 Frame = +1

Query: 322 AQPAEVLRAWQKDDQYEKQLADSISKLLPL-------QHGSKAIPISSLLYKSFTTLKDL 480
           A+  E++R+ QKD +Y  +LA+ +S +L L       ++      ++ L Y  F +  +L
Sbjct: 8   ARQPEIVRSVQKDARYTNELAEDLSDVLRLTGPRNWIKYNQMCRLLAELSYHGFASANNL 67

Query: 481 QTLGEEYSGIVQVDDSYHKLPSYYARLASVLLSTFGENLTRRFVNHVGKKIETNRSLRSE 660
           QTLGEEY+GI+QVD +Y ++PS   +L +++L   G++L +R +  +   +  N  +R+E
Sbjct: 68  QTLGEEYTGIIQVDGNYKQIPSRLLQLIAIVLEFGGDSLFQRLMQKLDTYVANNDEIRTE 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,113,825
Number of Sequences: 53049
Number of extensions: 486612
Number of successful extensions: 898
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)