Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0520
(677 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 25 0.50
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 25 0.66
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 24 1.5
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 2.0
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 2.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.0
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 4.7
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 4.7
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 4.7
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 8.2
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 8.2
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.4 bits (53), Expect = 0.50
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 298 HEKMALPVAQPAEVLRAWQKDDQYEKQLADSISKLLPLQHGSKAIPISSLLYKSF 462
H++ + AEVLR Q ++ D +S + L G +P L +SF
Sbjct: 96 HQRSLSSFLKTAEVLRVSGLTQQADQTDRDELSHVRALAAGGNHLPFHEKLVESF 150
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 25.0 bits (52), Expect = 0.66
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 520 DDSYHKLPSYYARLASVLLSTFGENLTRRFVNH 618
DDS+H+L S+ S +S ENLT + V++
Sbjct: 218 DDSFHRLSSHTLNHNSDKMSDQQENLTLKEVDN 250
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 341 YVHGKKTINTKNNWPIPYLNC-YHYST 418
YV+ T + N W P C Y++ST
Sbjct: 283 YVYEDSTYDDINQWVYPLTGCLYYFST 309
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 360 VFLPCT*NFSRLCYWQSHLF 301
+F P F L YW ++LF
Sbjct: 421 IFFPIVFAFFNLAYWSTYLF 440
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 360 VFLPCT*NFSRLCYWQSHLF 301
+F P F L YW ++LF
Sbjct: 421 IFFPIVFAFFNLAYWSTYLF 440
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 356 KTINTKNNWPIPYLNCYHYS 415
KTI+ NN+ Y N Y+Y+
Sbjct: 88 KTIHNNNNYKYNYNNKYNYN 107
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 356 KTINTKNNWPIPYLNCYHYSTVQKLFQYPLCFINHL 463
KTI+ NN+ Y N + + +KL+ Y + +I +
Sbjct: 88 KTIHNNNNYKYNYNNNNYNNNCKKLY-YNINYIEQI 122
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 356 KTINTKNNWPIPYLNCYHYSTVQKLFQYPLCFINHL 463
KTI+ NN+ Y N + + +KL+ Y + +I +
Sbjct: 88 KTIHNNNNYKYNYNNNNYNNNCKKLY-YNINYIEQI 122
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 356 KTINTKNNWPIPYLNCYHYSTVQKLFQYPLCFINHL 463
KTI+ NN+ Y N + + +KL+ Y + +I +
Sbjct: 88 KTIHNNNNYKYNYNNNNYNNNCKKLY-YNINYIEQI 122
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 122 FILQCITDLD 151
F+LQC+ DLD
Sbjct: 72 FLLQCLEDLD 81
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 198 KEYNIIYDVVEAKITQDYSNCY 263
+EYN I V+E K + + SN +
Sbjct: 256 REYNGIGAVIEFKYSYEISNAF 277
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,534
Number of Sequences: 438
Number of extensions: 3788
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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