Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0519
         (683 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35)                   30   2.0  
SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.6  
SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07)         28   8.1  
SB_19883| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.1  

>SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35)
          Length = 432

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 178 IDIVMLSIIALTITEPLISITLTVCIRSLNR 86
           +D V+  + A  ITE L++  LT+C+ S+NR
Sbjct: 156 LDEVVCKVNAFLITELLLASMLTICVISVNR 186


>SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 780

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -1

Query: 314 KQTGGQKLKKKNFGMCTVVYLTTHLVKSCHFIITNRHSNFIYLYRY*YSYAVNNS 150
           K T   +L K    +CT +++    ++S +F     HS +   Y + YS+  NNS
Sbjct: 469 KTTDPDELYKALVALCTDIFIVAPTMESANF-----HSEYSATYLFEYSHISNNS 518


>SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07)
          Length = 2435

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/33 (48%), Positives = 24/33 (72%)
 Frame = -2

Query: 199  ILFICIDIDIVMLSIIALTITEPLISITLTVCI 101
            I+FI I I I+++ +I LTIT   I+IT+T+ I
Sbjct: 1608 IIFIIIIILIIIIILILLTIT---ITITITIII 1637


>SB_19883| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 656

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 371 IANDIRSNLGYFF*ISLRPR-RHPRYDNNRG 460
           I+ ++R + G+F  I+L  R RH RY+N  G
Sbjct: 549 ISENVRHSFGFFVWITLSNRKRHKRYNNKYG 579


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,091,418
Number of Sequences: 59808
Number of extensions: 324167
Number of successful extensions: 630
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)