Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0517
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    26   0.35 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    26   0.35 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   5.7  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 319 KDKSVWFLDHDYLENMYGMFKKVNAXEKVVG 411
           K KS +   HD L N+Y   K V A  K++G
Sbjct: 6   KVKSYFTTHHDTLHNIYTSMKPVYAICKLIG 36


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 319 KDKSVWFLDHDYLENMYGMFKKVNAXEKVVG 411
           K KS +   HD L N+Y   K V A  K++G
Sbjct: 6   KVKSYFTTHHDTLHNIYTSMKPVYAICKLIG 36


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 645 SHFFSLLCTNFTWNMFK--GPRSWCTIIVYFLYCLVSF 538
           S  F L+  N   + F+    +S+CT +   +YC V+F
Sbjct: 20  SEIFCLVNFNHRESYFRLSKAKSFCTFVAALVYCSVTF 57


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 91  YFYYIFGICCCSILYYKVII 32
           YFYY F I  C   +Y   I
Sbjct: 102 YFYYAFIILLCVYYFYYAFI 121



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 91  YFYYIFGICCCSILYY 44
           YFYY+  + CC+ + +
Sbjct: 260 YFYYMHLLFCCAFIIF 275


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 627 LCTNFTWNMFKGPRSWCTIIVYFLYCLVSF 538
           +C NF +        +   + Y LYC  SF
Sbjct: 525 ICKNFCFGFITKQLIFMIFVTYQLYCWSSF 554


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 91  YFYYIFGICCCSIL 50
           YF YIFG   C I+
Sbjct: 389 YFAYIFGKFACKIM 402


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 91  YFYYIFGICCCSIL 50
           YF YIFG   C I+
Sbjct: 389 YFAYIFGKFACKIM 402


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 91  YFYYIFGICCCSIL 50
           YF YIFG   C I+
Sbjct: 389 YFAYIFGKFACKIM 402


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 91  YFYYIFGICCCSIL 50
           YF YIFG   C I+
Sbjct: 389 YFAYIFGKFACKIM 402


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 268 GVLDVSNSFAVPFDEDDKDKSV 333
           G L+  ++ + P D+DDKD+ +
Sbjct: 225 GSLEDDDNISDPEDDDDKDQDM 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,073
Number of Sequences: 336
Number of extensions: 3282
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)