Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0517
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 309 8e-84
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 309 8e-84
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 302 9e-82
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 69 2e-11
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 69 2e-11
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 69 2e-11
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 69 2e-11
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 69 2e-11
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 65 2e-10
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 48 4e-05
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 48 4e-05
U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog prot... 39 0.020
CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein. 39 0.020
BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive photo... 39 0.020
BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive photo... 39 0.020
BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive photo... 39 0.020
AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subuni... 39 0.020
U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated... 38 0.027
U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain bin... 38 0.027
BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome, ma... 38 0.027
AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein. 38 0.027
X98559-2|CAA67169.1| 931|Homo sapiens dsRNA adenosine deaminase... 31 5.4
X98559-1|CAA67170.1| 1221|Homo sapiens dsRNA adenosine deaminase... 31 5.4
X79449-1|CAA55968.1| 1226|Homo sapiens IFI-4 protein. 31 5.4
X79448-1|CAA55967.1| 931|Homo sapiens IFI-4 protein. 31 5.4
U75503-3|AAB97117.1| 1181|Homo sapiens RNA adenosine deaminase p... 31 5.4
U75503-2|AAB97116.1| 1200|Homo sapiens RNA adenosine deaminase p... 31 5.4
U75503-1|AAB97118.1| 1226|Homo sapiens RNA adenosine deaminase p... 31 5.4
U18121-1|AAC13782.1| 1226|Homo sapiens p136 protein. 31 5.4
U10439-1|AAB06697.1| 1226|Homo sapiens double-stranded RNA adeno... 31 5.4
BX538232-1|CAD98075.1| 1257|Homo sapiens hypothetical protein pr... 31 5.4
BC038227-1|AAH38227.1| 1226|Homo sapiens adenosine deaminase, RN... 31 5.4
AL691488-2|CAI17376.1| 1226|Homo sapiens adenosine deaminase, RN... 31 5.4
AL691488-1|CAI17375.1| 931|Homo sapiens adenosine deaminase, RN... 31 5.4
AL606500-2|CAH71908.1| 1226|Homo sapiens adenosine deaminase, RN... 31 5.4
AL606500-1|CAH71907.1| 931|Homo sapiens adenosine deaminase, RN... 31 5.4
AL592078-4|CAI16185.1| 1226|Homo sapiens adenosine deaminase, RN... 31 5.4
AL592078-2|CAI16183.1| 931|Homo sapiens adenosine deaminase, RN... 31 5.4
AB209891-1|BAD93128.1| 1244|Homo sapiens adenosine deaminase, RN... 31 5.4
BX640741-1|CAE45853.1| 1278|Homo sapiens hypothetical protein pr... 30 7.1
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 309 bits (758), Expect = 8e-84
Identities = 142/174 (81%), Positives = 154/174 (88%)
Frame = +1
Query: 190 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 369
DHFNR+ K+GNQKRVVGVLLG W+ K VLDVSNSFAVPFDEDDKD SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 370 GMFKKVNAXEKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQ 549
GMFKKVNA E++VGWYHTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYI 139
Query: 550 AVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHVLRDIKDTTVGSLSQRITN 711
+VEEVHDDGTPTS+TFEHV SEI H+LRDIKDTTVG+LSQRITN
Sbjct: 140 SVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITN 193
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 309 bits (758), Expect = 8e-84
Identities = 142/174 (81%), Positives = 154/174 (88%)
Frame = +1
Query: 190 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 369
DHFNR+ K+GNQKRVVGVLLG W+ K VLDVSNSFAVPFDEDDKD SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 370 GMFKKVNAXEKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQ 549
GMFKKVNA E++VGWYHTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYI 139
Query: 550 AVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHVLRDIKDTTVGSLSQRITN 711
+VEEVHDDGTPTS+TFEHV SEI H+LRDIKDTTVG+LSQRITN
Sbjct: 140 SVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITN 193
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 302 bits (741), Expect = 9e-82
Identities = 140/174 (80%), Positives = 152/174 (87%)
Frame = +1
Query: 190 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 369
DHFNR+ K+GNQKRVVGVLLG W+ K VLDVSNSFAVPFDEDDKD SVWFLDHDYLENMY
Sbjct: 21 DHFNRIVKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 370 GMFKKVNAXEKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQ 549
GMFKKVNA E++VGWYHTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYI 139
Query: 550 AVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHVLRDIKDTTVGSLSQRITN 711
+VEE DDGTPTS+TFEHV SEI H+LRDIKDTTVG+LSQRITN
Sbjct: 140 SVEEDQDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITN 193
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/106 (33%), Positives = 62/106 (58%)
Frame = +1
Query: 229 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAXEKVV 408
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+ E ++
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELIL 170
Query: 409 GWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 546
GWY TG + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 171 GWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 216
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/106 (33%), Positives = 62/106 (58%)
Frame = +1
Query: 229 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAXEKVV 408
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+ E ++
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELIL 170
Query: 409 GWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 546
GWY TG + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 171 GWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 216
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/106 (33%), Positives = 62/106 (58%)
Frame = +1
Query: 229 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAXEKVV 408
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+ E ++
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELIL 170
Query: 409 GWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 546
GWY TG + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 171 GWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 216
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/106 (33%), Positives = 62/106 (58%)
Frame = +1
Query: 229 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAXEKVV 408
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+ E ++
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELIL 170
Query: 409 GWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 546
GWY TG + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 171 GWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 216
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/106 (33%), Positives = 62/106 (58%)
Frame = +1
Query: 229 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAXEKVV 408
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+ E ++
Sbjct: 108 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELIL 163
Query: 409 GWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 546
GWY TG + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 164 GWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 209
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 65.3 bits (152), Expect = 2e-10
Identities = 36/119 (30%), Positives = 65/119 (54%)
Frame = +1
Query: 190 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 369
D + R +K RV+G LLG V +V+N F+V ++E D+ +D ++ +NMY
Sbjct: 94 DSYERRNK--GAARVIGTLLGTVNKHSV-EVTNCFSVSYNESDEV----VVDMEFAKNMY 146
Query: 370 GMFKKVNAXEKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 546
+ KKV+ E ++GWY G + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 147 ELHKKVSPNELILGWYAAGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGHMSIKAY 205
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 47.6 bits (108), Expect = 4e-05
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +1
Query: 190 DHFNRM-SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENM 366
DH+ RM S+ G +V+G L+G + + +V NSF + ++K + +D +Y
Sbjct: 23 DHWIRMRSQEGRPVQVIGALIGKQEGRNI-EVMNSFEL-LSHTVEEKII--IDKEYYYTK 78
Query: 367 YGMFKKVNAXEKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 546
FK+V + +GWY TG +DI +++ + + + + ++ K LP +
Sbjct: 79 EEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 138
Query: 547 QAVEEV 564
++V ++
Sbjct: 139 ESVIDI 144
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 47.6 bits (108), Expect = 4e-05
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +1
Query: 190 DHFNRM-SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENM 366
DH+ RM S+ G +V+G L+G + + +V NSF + ++K + +D +Y
Sbjct: 53 DHWIRMRSQEGRPVQVIGALIGKQEGRNI-EVMNSFEL-LSHTVEEKII--IDKEYYYTK 108
Query: 367 YGMFKKVNAXEKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 546
FK+V + +GWY TG +DI +++ + + + + ++ K LP +
Sbjct: 109 EEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 168
Query: 547 QAVEEV 564
++V ++
Sbjct: 169 ESVIDI 174
>U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog
protein.
Length = 334
Score = 38.7 bits (86), Expect = 0.020
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 387
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 388 NAXEKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 507
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein.
Length = 334
Score = 38.7 bits (86), Expect = 0.020
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 387
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 388 NAXEKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 507
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 38.7 bits (86), Expect = 0.020
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 387
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 388 NAXEKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 507
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 38.7 bits (86), Expect = 0.020
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 387
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 388 NAXEKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 507
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 38.7 bits (86), Expect = 0.020
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 387
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 388 NAXEKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 507
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subunit 5
variant protein.
Length = 276
Score = 38.7 bits (86), Expect = 0.020
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 387
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 38 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 96
Query: 388 NAXEKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 507
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 97 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 140
>U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated
pad1 homolog protein.
Length = 310
Score = 38.3 bits (85), Expect = 0.027
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +1
Query: 211 KIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 390
+ G V+G++LG + + V + FA+P + SV +D + M M K+
Sbjct: 46 RAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTGVSVEAVDPVFQAKMLDMLKQTG 103
Query: 391 AXEKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 507
E VVGWYH+ P L DI + +V V++D
Sbjct: 104 RPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
>U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain
binding protein protein.
Length = 334
Score = 38.3 bits (85), Expect = 0.027
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 387
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 388 NAXEKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 507
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GHLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 protein.
Length = 310
Score = 38.3 bits (85), Expect = 0.027
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +1
Query: 211 KIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 390
+ G V+G++LG + + V + FA+P + SV +D + M M K+
Sbjct: 46 RAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTGVSVEAVDPVFQAKMLDMLKQTG 103
Query: 391 AXEKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 507
E VVGWYH+ P L DI + +V V++D
Sbjct: 104 RPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
>AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein.
Length = 154
Score = 38.3 bits (85), Expect = 0.027
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +1
Query: 211 KIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 390
+ G V+G++LG + + V + FA+P + SV +D + M M K+
Sbjct: 46 RAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTGVSVEAVDPVFQAKMLDMLKQTG 103
Query: 391 AXEKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 507
E VVGWYH+ P L DI + +V V++D
Sbjct: 104 RPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
>X98559-2|CAA67169.1| 931|Homo sapiens dsRNA adenosine deaminase
protein.
Length = 931
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 775 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 820
>X98559-1|CAA67170.1| 1221|Homo sapiens dsRNA adenosine deaminase
protein.
Length = 1221
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1065 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1110
>X79449-1|CAA55968.1| 1226|Homo sapiens IFI-4 protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>X79448-1|CAA55967.1| 931|Homo sapiens IFI-4 protein.
Length = 931
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 775 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 820
>U75503-3|AAB97117.1| 1181|Homo sapiens RNA adenosine deaminase
protein.
Length = 1181
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1025 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1070
>U75503-2|AAB97116.1| 1200|Homo sapiens RNA adenosine deaminase
protein.
Length = 1200
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1044 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1089
>U75503-1|AAB97118.1| 1226|Homo sapiens RNA adenosine deaminase
protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>U18121-1|AAC13782.1| 1226|Homo sapiens p136 protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>U10439-1|AAB06697.1| 1226|Homo sapiens double-stranded RNA adenosine
deaminase protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>BX538232-1|CAD98075.1| 1257|Homo sapiens hypothetical protein
protein.
Length = 1257
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1101 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1146
>BC038227-1|AAH38227.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>AL691488-2|CAI17376.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>AL691488-1|CAI17375.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 775 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 820
>AL606500-2|CAH71908.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>AL606500-1|CAH71907.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 775 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 820
>AL592078-4|CAI16185.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>AL592078-2|CAI16183.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 775 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 820
>AB209891-1|BAD93128.1| 1244|Homo sapiens adenosine deaminase,
RNA-specific isoform ADAR-a variant protein.
Length = 1244
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1088 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1133
>BX640741-1|CAE45853.1| 1278|Homo sapiens hypothetical protein
protein.
Length = 1278
Score = 30.3 bits (65), Expect = 7.1
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 358 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 215
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1101 LFSQGHLTRAIC-CRVTRDG-SAFEGGLRHPFIVNHPKVGRVSIYDSK 1146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,126,922
Number of Sequences: 237096
Number of extensions: 1842982
Number of successful extensions: 3603
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3600
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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