Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0516
(647 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 26 0.31
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 24 0.94
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 24 0.94
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 22 5.0
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 6.6
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 21 6.6
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 21 6.6
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 21 8.7
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 21 8.7
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 8.7
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 25.8 bits (54), Expect = 0.31
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Frame = +3
Query: 99 LFLIFCCVIV------LFRLCSDYFDL 161
+ L+FCC + LF LC DYF L
Sbjct: 178 MHLLFCCAFIFFNMHLLFLLCLDYFTL 204
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 364 YKINIDLGGYEIYYYYVNFIIHIYF 290
Y I L Y YY ++ F +H+ F
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHLLF 129
Score = 21.4 bits (43), Expect = 6.6
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = +3
Query: 99 LFLIFCCVIVLFRL 140
+ L+FCC ++F +
Sbjct: 264 MHLLFCCAFIIFTM 277
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 24.2 bits (50), Expect = 0.94
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 466 VYYVFINTKKLKTNLYANFPSFNVMLGSRKMALIYK 359
+YYV + + L +Y+ F NV G+R++ ++ K
Sbjct: 1007 IYYVTVPSMYLLLVIYSVFNMNNVSWGTREVTVVPK 1042
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 24.2 bits (50), Expect = 0.94
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 466 VYYVFINTKKLKTNLYANFPSFNVMLGSRKMALIYK 359
+YYV + + L +Y+ F NV G+R++ ++ K
Sbjct: 1007 IYYVTVPSMYLLLVIYSVFNMNNVSWGTREVTVVPK 1042
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -1
Query: 92 LEKPLSAFMFLLHVLNNCFSCSVYL 18
++ P+ + LL+ LN+C + +YL
Sbjct: 296 IDGPVFVILTLLYSLNSCVNPWIYL 320
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +1
Query: 493 QMNYLNRTCQKMVYKDLYTYILYALEAIEI*NVLLDK 603
Q + + TC M ++T+++ L++I+ VLL++
Sbjct: 561 QSLWASPTCDLMYEFQIFTFLMSLLQSIKRRYVLLNE 597
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 21.4 bits (43), Expect = 6.6
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 282 TPFNI-IKLTYFSIIYFSTDLNISIYKTFLVLMLHF 178
T ++I ++ TY+ +Y T L + FL++ L F
Sbjct: 58 TAYSIYVRHTYYRRLYTITHLVLDYLDEFLIVALAF 93
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 21.4 bits (43), Expect = 6.6
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 282 TPFNI-IKLTYFSIIYFSTDLNISIYKTFLVLMLHF 178
T ++I ++ TY+ +Y T L + FL++ L F
Sbjct: 58 TAYSIYVRHTYYRRLYTITHLVLDYLDEFLIVALAF 93
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 260 SFIILNGVF*KIYMYYEI 313
SF++ N +F I++YY +
Sbjct: 102 SFVVANVLFQLIHVYYTV 119
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 260 SFIILNGVF*KIYMYYEI 313
SF++ N +F I++YY +
Sbjct: 102 SFVVANVLFQLIHVYYTV 119
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 260 SFIILNGVF*KIYMYYEI 313
SF++ N +F I++YY +
Sbjct: 422 SFVVANVLFQLIHVYYTV 439
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,484
Number of Sequences: 336
Number of extensions: 2927
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -