Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0516
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY050236-1|AAK84935.1|  700|Drosophila melanogaster SD02116p pro...    29   7.2  
AL035311-3|CAA22952.1|  700|Drosophila melanogaster EG:52C10.7 p...    29   7.2  
AF117649-1|AAD22030.1|  700|Drosophila melanogaster Adrift protein.    29   7.2  
AE013599-2565|AAF57788.1|  700|Drosophila melanogaster CG5032-PA...    29   7.2  

>AY050236-1|AAK84935.1|  700|Drosophila melanogaster SD02116p
           protein.
          Length = 700

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 99  LFLI-FCCVIVLFRLCSDYFDLCFNGNENVTLT 194
           LFL  +   ++LF + S Y D CFN N+  TLT
Sbjct: 580 LFLTHYAASLLLFLIESVYQDCCFNSNQAQTLT 612


>AL035311-3|CAA22952.1|  700|Drosophila melanogaster EG:52C10.7
           protein.
          Length = 700

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 99  LFLI-FCCVIVLFRLCSDYFDLCFNGNENVTLT 194
           LFL  +   ++LF + S Y D CFN N+  TLT
Sbjct: 580 LFLTHYAASLLLFLIESVYQDCCFNSNQAQTLT 612


>AF117649-1|AAD22030.1|  700|Drosophila melanogaster Adrift protein.
          Length = 700

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 99  LFLI-FCCVIVLFRLCSDYFDLCFNGNENVTLT 194
           LFL  +   ++LF + S Y D CFN N+  TLT
Sbjct: 580 LFLTHYAASLLLFLIESVYQDCCFNSNQAQTLT 612


>AE013599-2565|AAF57788.1|  700|Drosophila melanogaster CG5032-PA
           protein.
          Length = 700

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 99  LFLI-FCCVIVLFRLCSDYFDLCFNGNENVTLT 194
           LFL  +   ++LF + S Y D CFN N+  TLT
Sbjct: 580 LFLTHYAASLLLFLIESVYQDCCFNSNQAQTLT 612


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,792,062
Number of Sequences: 53049
Number of extensions: 407777
Number of successful extensions: 637
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)