Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0515
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    27   0.16 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.0  

>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 339 VHFEDYVNGNGSAYHKGDRYTAAPNEIFVNRSLHLENVKFYGFD 470
           +H  D+V G+G++   G  Y  + N + V  +  L  + F  F+
Sbjct: 80  IHGGDFVTGSGTSEMYGPDYLMSENVVLVTINYRLGMLGFLSFE 123


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 414 EIFVNRSLHLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVKGYPREILEFEY 587
           ++F+N +L +ENV+       Y      S  Y   G +L  + +V    P +IL F++
Sbjct: 558 KVFINGTLIIENVERASDQATYDCVAKNSQGYSARG-SLEVQVMV----PPQILPFDF 610


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 87  SRHRIRCIKHNN*HMVRHDKI 25
           +RH+I  + H++ H + HD +
Sbjct: 352 TRHQISSMGHSHAHPMHHDML 372


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 87  SRHRIRCIKHNN*HMVRHDKI 25
           +RH+I  + H++ H + HD +
Sbjct: 352 TRHQISSMGHSHAHPMHHDML 372


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = -3

Query: 473 HIKTVKFNIF*MQRSV 426
           +++TVKFN+F + ++V
Sbjct: 189 NVETVKFNLFLLSQAV 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,462
Number of Sequences: 336
Number of extensions: 3254
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)