Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0514
(506 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358788-1|AAQ89148.1| 159|Homo sapiens AVLL5809 protein. 50 6e-06
CR456932-1|CAG33213.1| 159|Homo sapiens SDHD protein. 48 1e-05
BT007238-1|AAP35902.1| 159|Homo sapiens succinate dehydrogenase... 48 1e-05
BC071756-1|AAH71756.1| 159|Homo sapiens succinate dehydrogenase... 48 1e-05
BC071755-1|AAH71755.1| 159|Homo sapiens succinate dehydrogenase... 48 1e-05
BC022350-1|AAH22350.1| 159|Homo sapiens succinate dehydrogenase... 48 1e-05
BC015992-1|AAH15992.1| 159|Homo sapiens succinate dehydrogenase... 48 1e-05
BC015188-1|AAH15188.1| 159|Homo sapiens succinate dehydrogenase... 48 1e-05
BC012603-1|AAH12603.1| 159|Homo sapiens succinate dehydrogenase... 48 1e-05
BC009574-1|AAH09574.1| 159|Homo sapiens succinate dehydrogenase... 48 1e-05
BC005263-1|AAH05263.1| 159|Homo sapiens succinate dehydrogenase... 48 1e-05
AB026906-1|BAA81889.1| 159|Homo sapiens small subunit of cytoch... 48 1e-05
AB006202-1|BAA22054.1| 159|Homo sapiens cytochrome b small subu... 48 1e-05
BC070307-1|AAH70307.1| 159|Homo sapiens succinate dehydrogenase... 48 2e-05
BX649592-6|CAO03500.1| 1266|Homo sapiens plexin B2 protein. 31 1.7
BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein. 31 1.7
AB075511-1|BAE45757.1| 905|Homo sapiens putative protein produc... 31 1.7
AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein. 31 1.7
BC033437-1|AAH33437.1| 801|Homo sapiens DENN/MADD domain contai... 31 3.1
AL834293-1|CAD38966.1| 372|Homo sapiens hypothetical protein pr... 31 3.1
AK026410-1|BAB15475.1| 793|Homo sapiens protein ( Homo sapiens ... 31 3.1
AK126180-1|BAC86476.1| 179|Homo sapiens protein ( Homo sapiens ... 30 5.3
U82258-1|AAC16894.1| 108|Homo sapiens anti-ssDNA antibody light... 29 7.1
BC025315-1|AAH25315.1| 654|Homo sapiens WD repeat domain 70 pro... 29 9.3
BC009648-1|AAH09648.1| 654|Homo sapiens WD repeat domain 70 pro... 29 9.3
AL512685-1|CAC21644.1| 674|Homo sapiens hypothetical protein pr... 29 9.3
AK001095-1|BAA91502.1| 654|Homo sapiens protein ( Homo sapiens ... 29 9.3
>AY358788-1|AAQ89148.1| 159|Homo sapiens AVLL5809 protein.
Length = 159
Score = 49.6 bits (113), Expect = 6e-06
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ LIP + P + D LA +T HS WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLIPAGYLNPCSVVDYSLAAALTLHSHWGLGQVVTDYV 115
>CR456932-1|CAG33213.1| 159|Homo sapiens SDHD protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BT007238-1|AAP35902.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BC071756-1|AAH71756.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BC071755-1|AAH71755.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BC022350-1|AAH22350.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BC015992-1|AAH15992.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BC015188-1|AAH15188.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BC012603-1|AAH12603.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BC009574-1|AAH09574.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BC005263-1|AAH05263.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>AB026906-1|BAA81889.1| 159|Homo sapiens small subunit of
cytochrome b of succinate dehydrogenase protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>AB006202-1|BAA22054.1| 159|Homo sapiens cytochrome b small subunit
of complex II protein.
Length = 159
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BC070307-1|AAH70307.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 352 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYV 501
W ERVVS L+ L+P A + P D LA +T H WGL + DYV
Sbjct: 66 WTSERVVSFLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYV 115
>BX649592-6|CAO03500.1| 1266|Homo sapiens plexin B2 protein.
Length = 1266
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 343 SRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFW 471
SR WV+ RV V +PL+L++P + ++ I ++ + +W
Sbjct: 607 SREWVLGRVEYDTRVSDVPLSLILPLVIVPMVVVIAVSVYCYW 649
>BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein.
Length = 1838
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 343 SRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFW 471
SR WV+ RV V +PL+L++P + ++ I ++ + +W
Sbjct: 1179 SREWVLGRVEYDTRVSDVPLSLILPLVIVPMVVVIAVSVYCYW 1221
>AB075511-1|BAE45757.1| 905|Homo sapiens putative protein product
of Nbla00445 protein.
Length = 905
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 343 SRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFW 471
SR WV+ RV V +PL+L++P + ++ I ++ + +W
Sbjct: 246 SREWVLGRVEYDTRVSDVPLSLILPLVIVPMVVVIAVSVYCYW 288
>AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein.
Length = 1841
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 343 SRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFW 471
SR WV+ RV V +PL+L++P + ++ I ++ + +W
Sbjct: 1182 SREWVLGRVEYDTRVSDVPLSLILPLVIVPMVVVIAVSVYCYW 1224
>BC033437-1|AAH33437.1| 801|Homo sapiens DENN/MADD domain
containing 1C protein.
Length = 801
Score = 30.7 bits (66), Expect = 3.1
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 493 RPRSLPGPRNCER*SV--SPGESRIVCSAS*GLTESMGPVQQKPLSQ*PRAWSGPRPSPL 320
+P SLP +N S +SR S E P Q S P W P+PSPL
Sbjct: 616 QPLSLPSLQNASSLDATSSSKDSRSQLIPSESDQEVTSPSQSSTASADPSIWGDPKPSPL 675
Query: 319 T 317
T
Sbjct: 676 T 676
>AL834293-1|CAD38966.1| 372|Homo sapiens hypothetical protein
protein.
Length = 372
Score = 30.7 bits (66), Expect = 3.1
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 493 RPRSLPGPRNCER*SV--SPGESRIVCSAS*GLTESMGPVQQKPLSQ*PRAWSGPRPSPL 320
+P SLP +N S +SR S E P Q S P W P+PSPL
Sbjct: 187 QPLSLPSLQNASSLDATSSSKDSRSQLIPSESDQEVTSPSQSSTASADPSIWGDPKPSPL 246
Query: 319 T 317
T
Sbjct: 247 T 247
>AK026410-1|BAB15475.1| 793|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22757 fis, clone KAIA0803. ).
Length = 793
Score = 30.7 bits (66), Expect = 3.1
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 493 RPRSLPGPRNCER*SV--SPGESRIVCSAS*GLTESMGPVQQKPLSQ*PRAWSGPRPSPL 320
+P SLP +N S +SR S E P Q S P W P+PSPL
Sbjct: 616 QPLSLPSLQNASSLDATSSSKDSRSQLIPSESDQEVTSPSQSSTASADPSIWGDPKPSPL 675
Query: 319 T 317
T
Sbjct: 676 T 676
>AK126180-1|BAC86476.1| 179|Homo sapiens protein ( Homo sapiens
cDNA FLJ44192 fis, clone THYMU2039780. ).
Length = 179
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 336 GPLQALGH*ESGFCCTGPIDSVSP 407
GP A GH SG CC P+ SV P
Sbjct: 2 GPAAAPGHLSSGGCCVLPLPSVLP 25
>U82258-1|AAC16894.1| 108|Homo sapiens anti-ssDNA antibody light
chain variable region protein.
Length = 108
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 451 SVSPGE-SRIVCSAS*GLTESMGPVQQKPLSQ*PR 350
SVSPGE + + C AS T +G QQKP Q PR
Sbjct: 12 SVSPGERATLSCRASQSFTSKLGWYQQKP-GQAPR 45
>BC025315-1|AAH25315.1| 654|Homo sapiens WD repeat domain 70
protein.
Length = 654
Score = 29.1 bits (62), Expect = 9.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 504 AHVVDRDRFQAPETVSGDQY 445
A V+DRD F+ E + GDQY
Sbjct: 253 AKVIDRDGFEVMECIKGDQY 272
>BC009648-1|AAH09648.1| 654|Homo sapiens WD repeat domain 70
protein.
Length = 654
Score = 29.1 bits (62), Expect = 9.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 504 AHVVDRDRFQAPETVSGDQY 445
A V+DRD F+ E + GDQY
Sbjct: 253 AKVIDRDGFEVMECIKGDQY 272
>AL512685-1|CAC21644.1| 674|Homo sapiens hypothetical protein
protein.
Length = 674
Score = 29.1 bits (62), Expect = 9.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 504 AHVVDRDRFQAPETVSGDQY 445
A V+DRD F+ E + GDQY
Sbjct: 273 AKVIDRDGFEVMECIKGDQY 292
>AK001095-1|BAA91502.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ10233 fis, clone HEMBB1000266. ).
Length = 654
Score = 29.1 bits (62), Expect = 9.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 504 AHVVDRDRFQAPETVSGDQY 445
A V+DRD F+ E + GDQY
Sbjct: 253 AKVIDRDGFEVMECIKGDQY 272
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,982,829
Number of Sequences: 237096
Number of extensions: 1685098
Number of successful extensions: 7818
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7814
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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