Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0514
         (506 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071617-1|AAL49239.1|  182|Drosophila melanogaster RE66546p pro...    70   2e-12
AY071388-1|AAL49010.1|  182|Drosophila melanogaster RE42847p pro...    70   2e-12
AE014297-3381|AAF56180.1|  182|Drosophila melanogaster CG10219-P...    70   2e-12
AE014296-1422|AAF50443.2|  407|Drosophila melanogaster CG7072-PA...    29   4.8  
AY122239-1|AAM52751.1|  696|Drosophila melanogaster SD01848p pro...    28   6.3  
AE014296-527|AAF47698.1|  667|Drosophila melanogaster CG2107-PA ...    28   6.3  

>AY071617-1|AAL49239.1|  182|Drosophila melanogaster RE66546p
           protein.
          Length = 182

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = +1

Query: 316 RSAEKVEDHSRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVD 495
           R A     H+ LW +ER+VSA L+ +IP A + P+++ D+L+AI +  H+ WG+EA+ VD
Sbjct: 65  RMASAGSSHTLLWTVERIVSAGLLAVIPAAFIAPSQVLDALMAISVVIHTHWGVEAMVVD 124

Query: 496 YVR 504
           Y+R
Sbjct: 125 YMR 127


>AY071388-1|AAL49010.1|  182|Drosophila melanogaster RE42847p
           protein.
          Length = 182

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = +1

Query: 316 RSAEKVEDHSRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVD 495
           R A     H+ LW +ER+VSA L+ +IP A + P+++ D+L+AI +  H+ WG+EA+ VD
Sbjct: 65  RMASAGSSHTLLWTVERIVSAGLLAVIPAAFIAPSQVLDALMAISVVIHTHWGVEAMVVD 124

Query: 496 YVR 504
           Y+R
Sbjct: 125 YMR 127


>AE014297-3381|AAF56180.1|  182|Drosophila melanogaster CG10219-PA
           protein.
          Length = 182

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = +1

Query: 316 RSAEKVEDHSRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVD 495
           R A     H+ LW +ER+VSA L+ +IP A + P+++ D+L+AI +  H+ WG+EA+ VD
Sbjct: 65  RMASAGSSHTLLWTVERIVSAGLLAVIPAAFIAPSQVLDALMAISVVIHTHWGVEAMVVD 124

Query: 496 YVR 504
           Y+R
Sbjct: 125 YMR 127


>AE014296-1422|AAF50443.2|  407|Drosophila melanogaster CG7072-PA
           protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +3

Query: 87  VLVIYHTINNHGVLHVSSYIRMPKSNVHSTSYEASDPASNNTTY 218
           V  + +T ++H   +   +   P+ N +S  YE +DP + N+ +
Sbjct: 130 VRTVDYTADDHNGFNAVVHKTAPRPNTYSFGYEINDPQTQNSQF 173


>AY122239-1|AAM52751.1|  696|Drosophila melanogaster SD01848p
           protein.
          Length = 696

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 183 HSLLSEHSTLAS*CTKKHGERHGYLSCDILLKLFYNNKI 67
           H  LS  ST +S  T  HG+ + YL C  L  L++   +
Sbjct: 36  HRNLSWISTNSSRTTTTHGQHYQYLQCSKLPTLYFQRSL 74


>AE014296-527|AAF47698.1|  667|Drosophila melanogaster CG2107-PA
           protein.
          Length = 667

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 183 HSLLSEHSTLAS*CTKKHGERHGYLSCDILLKLFYNNKI 67
           H  LS  ST +S  T  HG+ + YL C  L  L++   +
Sbjct: 7   HRNLSWISTNSSRTTTTHGQHYQYLQCSKLPTLYFQRSL 45


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,864,894
Number of Sequences: 53049
Number of extensions: 475016
Number of successful extensions: 1184
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)